Multiplexing with three-primer PCR for rapid and economical microsatellite validation.

The next generation sequencing revolution has enabled rapid discovery of genetic markers, however, development of fully functioning new markers still requires a long and costly process of marker validation. This study reports a rapid and economical approach for the validation and deployment of polymorphic microsatellite markers obtained from a 454 pyrosequencing library of Atlantic cod, Gadus morhua, Linnaeus 1758. Primers were designed from raw reads to amplify specific amplicon size ranges, allowing effective PCR multiplexing. Multiplexing was combined with a three-primer PCR approach using four universal tails to label amplicons with separate fluorochromes. A total of 192 primer pairs were tested, resulting in 73 polymorphic markers. Of these, 55 loci were combined in six multiplex panels each containing between six and eleven markers. Variability of the loci was assessed on G. morhua from the Celtic Sea (n 46) and the Scotian Shelf (n 46), two locations that have shown genetic differentiation in previous studies. Multilocus FST between the two samples was estimated at 0.067 (P 0.001). After three loci potentially under selection were excluded, the global FST was estimated at 0.043 (P 0.001). Our technique combines three- primer and multiplex PCR techniques, allowing simultaneous screening and validation of relatively large numbers of microsatellite loci.

A primer for the Environmental Impact Assessment of mining at seafloor massive sulfide deposits

Seafloor massive sulfides (SMS) contain commercially viable quantities of high grade ores, making them attractive prospect sites for marine mining. SMS deposits may also contain hydrothermal vent ecosystems populated by high conservation value vent-endemic species. Responsible environmental management of these resources is best achieved by the adoption of a precautionary approach. Part of this precautionary approach involves the Environmental Impact Assessment (EIA) of exploration and exploitative activities at SMS deposits. The VentBase 2012 workshop provided a forum for stakeholders and scientists to discuss issues surrounding SMS exploration and exploitation. This forum recognised the requirement for a primer which would relate concepts underpinning EIA at SMS deposits. The purpose of this primer is to inform policy makers about EIA at SMS deposits in order to aid management decisions. The primer offers a basic introduction to SMS deposits and their associated ecology, and the basic requirements for EIA at SMS deposits; including initial data and information scoping, environmental survey, and ecological risk assessment. © 2013 Elsevier Ltd.

A primer for use of genetic tools in selecting and testing the suitability of set-aside sites protected from deep-sea seafloor massive sulfide mining activities

Seafloor massive sulfide (SMS) mining will likely occur at hydrothermal systems in the near future. Alongside their mineral wealth, SMS deposits also have considerable biological value. Active SMS deposits host endemic hydrothermal vent communities, whilst inactive deposits support communities of deep water corals and other suspension feeders. Mining activities are expected to remove all large organisms and suitable habitat in the immediate area, making vent endemic organisms particularly at risk from habitat loss and localised extinction. As part of environmental management strategies designed to mitigate the effects of mining, areas of seabed need to be protected to preserve biodiversity that is lost at the mine site and to preserve communities that support connectivity among populations of vent animals in the surrounding region. These "set-aside" areas need to be biologically similar to the mine site and be suitably connected, mostly by transport of larvae, to neighbouring sites to ensure exchange of genetic material among remaining populations. Establishing suitable set-asides can be a formidable task for environmental managers, however the application of genetic approaches can aid set-aside identification, suitability assessment and monitoring. There are many genetic tools available, including analysis of mitochondrial DNA (mtDNA) sequences (e.g. COI or other suitable mtDNA genes) and appropriate nuclear DNA markers (e.g. microsatellites, single nucleotide polymorphisms), environmental DNA (eDNA) techniques and microbial metagenomics. When used in concert with traditional biological survey techniques, these tools can help to identify species, assess the genetic connectivity among populations and assess the diversity of communities. How these techniques can be applied to set-aside decision making is discussed and recommendations are made for the genetic characteristics of set-aside sites. A checklist for environmental regulators forms a guide to aid decision making on the suitability of set-aside design and assessment using genetic tools. This non-technical primer document represents the views of participants in the VentBase 2014 workshop.

Teología india: Primer taller latinoamericano

Memorias del Encuentro Taller de Teología India, celebrado en México del 16 al 23 de septiembre de 1990, donde plantea cuestionamientos a las formas tradicionales de entender la fe cristiana.

Assessing the combined effect of land management and wildfire on runoff and soil erosion in north central Portugal

Strong and sometimes extreme responses in runoff and soil erosion following wildfires have been reported worldwide. However, in the case of North-Central Portugal, little research had been carried out regarding the hydrologic and erosive impacts of several land management activities in recently burnt areas (such as ground preparation, post-fire logging or post-fire mitigation treatments). This study aims to assess post-fire runoff and soil erosion response on Eucalypt and Maritime pine plantations during the first, second and third years following wildfires. The effect of several pre-fire ground preparation operations (ploughed down-slope, contour ploughed and inclined terraces), post-fire logging activities (on both the eucalypt and pine plantations), as well as the application of hydromulch (a post-fire emergency treatment) on overland flow and soil erosion were compared to burnt but undisturbed and untreated areas. The intensive monitoring of runoff, soil erosion and selected soil properties served to determine the main factors involved in post-fire runoff and soil erosion and their spatial and temporal variation. Soil water repellency deserved special attention, due to its supposed important role for overland flow generation. Repeated rainfall simulation experiments (RSE’s), micro-scale runoff plots and bounded sediment fences were carried out and/or installed immediately after the wildfire on seven burnt slopes. Micro-scale runoff plots results under natural rainfall conditions were also compared to the RSE’s results, which was useful for assessing the representativeness of the data obtained with artificial rainfall. The results showed comparable runoff coefficient (20-60%) but lower sediment losses (125-1000 g m-2) than prior studies in Portugal, but especially outside Portugal. Lower sediment losses were related with the historic intensive land use in the area. In evaluating these losses, however, the shallowness and stoniness of the soils, as well as the high organic matter fraction of the eroded sediments (50%) must not be overlooked. Sediment limited erosion was measured in all the ploughed sites, probably due to the time since ploughing (several years). The disturbance of the soil surface cover due to post-fire logging and wood extraction substantially increased sediment losses at both the pine and eucalypt sites. Hydromulch effectiveness in reducing the runoff (70%) and sediment losses (83%) was attributed to the protective high coverage provided by hydromulch. The hydromulch significantly affected the soil cover and other soil properties and these changes also reduced the soil erosion risk. The rainfall amount was the main factor explaining the variance in runoff. However, a shift from rainfall amount to rainfall intensity was detected when either the surface cover or the infiltration capacity (hydrophilic conditions) increased. Sediment losses were controlled by rainfall intensity and surface cover. The role of soil water repellency on runoff generation was not consistent; the overall repellency levels alone were not enough to assess its hydrological impact. Soil water repellency explained runoff generation in the specific-sites model better than in the overall model. Additionally, soil moisture content was a better predictor for soil water repellency than antecedent rainfall. The natural rainfall results confirmed that RSE’s were able to capture the specific sediment losses and its organic matter content as well as the differences between the ploughed and unploughed sites. Repeated RSE’s also captured the seasonal variations in runoff and sediment losses attributed to soil water repellency. These results have implications for post-fire soil erosion modelling and soil conservation practices in the region, or areas with the same land use, climate and soil characteristics. The measured sediment loss, as well as the increasing frequency of ploughing in recently burnt and unburnt eucalypt stands, suggests ploughing is not an effective as a soil conservation measure. Logging activities with less impact are recommended in order to maintain the forest litter protecting the soil surface. Due to its high effectiveness in reducing runoff and soil erosion, hydromulch is recommended for highly sensitive and vulnerable areas.

Nacionalismo y poesía popular. Manuel Murguía y la invención de romancero gallego apócrifo

La anómala situación de los estudios sobre el Romancero de Galicia, y la indefinición de su propio estatuto como rama del Romancero hispánico, tienen su origen, en última instancia, en las posturas cambiantes que adoptó el primer nacionalismo cultural gallego, por razones ideológicas, ante el género de la poesía oral narrativa. Manuel Murguía es considerado hoy, por la amplitud y el eco de su obra, además de por su longevidad (1833-1923) y su papel como impulsor y heredero de la obra poética en gallego de Rosalía de Castro, como indiscutible padre fundador del galleguismo. Un nacionalismo gallego fundamentado en la tradición histórica y cultural tenía forzosamente que conceder gran importancia a las producciones de la poesía narrativa popular, como sucedió en el resto de la Europa coetánea. Sin embargo, a la altura de los 1860, se conocían solo muy escasas muestras de romances en Galicia, y su lengua era básicamente el castellano. El Romancero era así inservible como seña de identidad nacional o regional, y Murguía decidió dar la vuelta al argumento: la inexistencia de un Romancero gallego era en sí misma la prueba de un rasgo diferencial definitorio frente a Castilla. El conocimiento del Romancero portugués y una incipiente exploración de la tradición oral gallega llevaron, pocos años después, al “patriarca” a afirmar no sólo la existencia sino el esplendor de un Romanero gallego con características singulares. Tal romancero ha resultado ser producto de mixtificaciones de diverso grado realizadas por el propio Murguía y otros folcloristas. Se publica en este artículo la primera parte de un estudio, que irá seguida ulteriormente del inventario completo y análisis crítico de los romances gallegos alegados, y nunca publicados en colección, por Murguía.

Non-Invasive Human Brain Stimulation in Cognitive Neuroscience: A Primer

The use of non-invasive brain stimulation is widespread in studies of human cognitive neuroscience. This has led to some genuine advances in understanding perception and cognition, and has raised some hopes of applying the knowledge in clinical contexts. There are now several forms of stimulation, the ability to combine these with other methods, and ethical questions that are special to brain stimulation. In this Primer, we aim to give the users of these methods a starting point and perspective from which to view the key questions and usefulness of the different forms of non-invasive brain stimulation. We have done so by taking a critical view of recent highlights in the literature, selected case studies to illustrate the elements necessary and sufficient for good experiments, and pointed to questions and findings that can only be addressed using interference methods

Informe estadístico de los recursos hidrobiológicos de la pesca artesanal por especies, artes, caletas y meses durante el primer semestre de 1998

Resultado de las estadísticas globales de la pesquería artesanal de los 31 puertos de desembarque entre puertos y caletas muestreados a nivel nacional durante el primer semestre de 1998. De esta manera se están alcanzando parte de la metas establecidas por el Proyecto de Determinación del Potencial Pesquero Artesanal en el Litoral Peruano. El análisis del desembarque total de recursos hidrobiológicos por periodos semestrales, mostró que, en el primer semestre de 1998, éste descendió en 41,6% con respecto a su homólogo de 1997; y 36,2% con respecto al segundo semestre del mismo año. Los desembarques en todo el litoral ascendieron a 63.173 toneladas de recursos hidrobiológicos, de los cuales los peces representaron el 75,7% (47.813 t), los invertebrados el 23,7% (26.533 t) y otros (mamíferos, reptiles, etc.) el 0,6% (368 t).

Informe estadistico de los recursos hidrobiologicos de la pesca artesanal por especies, artes, meses y caletas durante el primer semestre de 1999

Presenta información colectada en 28 puntos de desembarque, entre puertos y caletas muestreados a nivel nacional durante el primer semestre de 1999. Con ello el proyecto Determinación del Potencial Pesquero Artesanal en el Litoral Peruano, mediante la ejecución del convenio VECEP-IMARPE, hace entrega del quinto volumen de resultados sobre las estadísticas de desembarque de la pesquería artesanal.

Informe estadístico de los recursos hidobiológicos de la pesca artesanal por especies, artes, meses y caletas durante el primer semestre del 2000

Se presenta la lista de especies desembarcadas por la pesquería artesanal; el consolidado de la flota artesanal por lugares de desembarque; el consolidado del estimado mensual de los desembarques de los recursos hidrobiológicos; el estimado de los desembarques por puertos caletas; el estimado por artes y métodos de pesca; el consolidado del estimado de los desembarques por lugares y artes y métodos de pesca.

Informe primer semestre 2012

Banco del conocimiento

Informe de disminución de motivos primer trimestre. Período comprendido entre Enero, Febrero y Marzo de 2012 - 2013

Banco del conocimiento

Desarrollo humano y organizacional, primer semestre 2011 - 2012

Banco del conocimiento