Characterization of Sarcocystis species in domestic animals using a PCR-RFLP analysis of variation in the 18S rRNA gene: a cost-effective and simple technique for routine species identification

Thirteen restriction endonucleases were used to investigate nucleotide sequence variation in the 18S rRNA DNA of 88 individuals from ten Sarcocystis taxa collected as cysts from their intermediate hosts, swine, cattle and water buffalo. A DNA sequence of

Ecology of Indian estuaries-XI. A preliminary survey of the fishery resources of the Ashtamudi estuarine system

The fish fauna of the Ashtamudi, the second largest estuarine system in Kerala (8°53'-9°02' N Lat. and 76°31'-76°41' E Long.) is listed. 97 species belonging to 39 families have been recorded, ofwhich69 are commercially important contributing to the fisheries of the Ashtamudi Estuary. Mullets, cichlids and the glassy perchlets are the most abundant groups and contribute appreciably to the landings. Results revealed that the estuarine system supports a good capture fishery which is seasonal. Majority of the fish fauna in the estuary are marine elements recruited from the adjoining Arabian Sea. An inventory of the craft and gear employed is presented and the sources of pollution in the estuarine system are described, aquacultural prospects of this area are discussed.

Vertical distribution of marine wood boring and fouling organisms from the estuarine areas of the south west coast of India

Vertical distribution of marine wood boring and fouling organisms from three different estuarine areas namely, the Ernakulam channel in the Cochin backwaters, Ayiramthengu in the Kayamkulam Lake and Neendakara in the Asthamudi Lake during the post-monsoon, the pre-monsoon and the monsoon periods is presented. The boring organisms noticed during the present study were Martesia striata, Teredo furcifera, Nausitora hedleyi and Sphaeroma terebrans. The dominant fouling organisms were Balanus amphitrite amphitrite, calcareous worms and Modiolus sp. Algae and diatoms were very common on the sub-tidal panels during the monsoon. The incidence of Teredo, Nausitora and calcareous tube worms were significantly high on the bottom panels. Sphaeroma, Balanus and Modiolus occurred in greater numbers on the intertidal panels.

Studies on the occurrence of enteric bacteria in the estuarine waters along the Mangalore coast

Occurrence of enteric bacteria in water, sediment and shellfishes of Mulki, Pavanje, Gurpur and Netravathi estuaries of the Mangalore coast is reported. 70 water samples, 71 sediment samples and 37 shellfish samples were analysed in 18 months. Total bacterial load in sediment and shellfishes was found to be more than that in water samples. The total bacterial load was not very high. However, enterococci, particularly coliforms in sediments, water and shellfishes were found to be quite high, indicative of faecal pollution. The incidence of Salmonella spp. was recorded in all the estuaries except the Mulki estuary.

Spawning behaviour and induced breeding of an estuarine catfish, Mystus gulio (Ham.)

Spawning behaviour of hormone induced estuarine catfish, Mystus gulio was observed in captive condition. Spawning activities that include pairing, chasing and resting, nudging, and twisting, started about 5 hours post injection and ended with release of eggs within 1-2 hours of courtship. Three different dosages of "ovaprim" (1 ml/kg, 1.5 ml/kg, and 2 ml/kg in a single dose) were used in induced breeding of M gulio. The latency period was less (6-7 hours) with the dose of 1.5 and 2 ml/kg, while it was more (7-8 hours) with that of 1 ml/kg. However, all females spawned successfully with each of three different dosages, without any significant differences in the rate of fertilization and hatching. Eggs under all hormone dosages hatched between 18-20 hours after spawning. The hatching rate with 1, 1.5, and 2 ml/kg varied from 71.3-72.7%, corresponding to the fertilization rate of 80.7-84.7%.

Biology of the penaeid shrimp populations exploited by Estuarine Set Bagnet

Results of analysis of part of the data collected during October, 1989 to December, 1990 are given on the biology and catch assessment studies on the Estuarine Set Bagnet (ESBN) from six sampling stations covering the entire coast line of Bangladesh. Length frequency analysis of seven most commonly occurring penaeid shrimp species have been done with complete ELEFAN software package. The result of exploitation patterns indicate that all penaeids except P. stylifera are being over exploited on their way back to the Sea from the nursery ground. This appeared to be the instances of serious growth over fishing. These species are exploited at a size much lower than the length at first maturity, which strongly suggests a complete withdrawal of the bagnet fishery from the coast of Bangladesh.

Morphometric and meristic studies of the spotted estuarine prawn, Macrobrachium equidens (Dana) of Vembanad Lake, Kerala State

The paper reports on the statistical analysis of growth pattern and meristic studies of body parts of the spotted estuarine prawn, Macrobrachium equidens (Dana) of Vembanad Lake, Kerala State. The results showed that the growth pattern of carapace length, telson length, ischium length and dactylus length in relation to total length were significantly different between the sexes at slope itself (at 1% level) and growth pattern of abdominal length, merus length, carpus length, propodus length and palm length were significant at elevations (5%, 1% levels). The average sizes of all these characters were greater in males than in females. Regression equations have been calculated for the characters and presented in the text. Among the characters of the carapace, rostrum length, post-orbital length showed significant difference between sexes at 1% level (slope value) and width of carapace at 1% level (elevations). The average sizes of all these characters were higher in males. Among the meristic characters studied, the species exhibited sexual dimorphism with regard to dorsal teeth, post-orbital teeth and ventral teeth. The fundamental data generated is essential for establishing the species status as well as it is useful for making comparison with other species.

Effects of toxins induced by phytoplankton bloom on physiological function of indicator animals in Anzali Lagoon

The present overview summarizes data from one year's study during the period of 1379 to 1380 in the regions by "Anzali" lagoon called "Abkenar" and "Hendkhale". Specimens from this lagoon obtained weekly during mordad and shahrivar mounths (July 21 to september 21). The study included 67 types of 5 phytoplanktonal phylum. In "Abkenar" region Cyanobacters with maximum of 97% and minimum of 64.5% of total combination of phytoplanktones made the dominating combination during the period of study , while in "hendkhale" chyrsophyta with maximum of 89% and minimum of 38.7% of total phytoplanktonal was the dominating figure at the same period of time. Researches on ecological parameteres showed that the avarage dissolved oxygen in -Abkenar" and "hendlchale" regions was 10.7 and 8.0 mg/lit respectivly, also total rate of Phosphat in these regions was 0.085 and 0.15 mg/lit respectivly. This study showed that the rates of Nitrat and Amonium in "Abkenar" region was 0.043 and 0.79 mg / lit while for the same substances in "Ilendkhale" measured 0.08 and 0.7 mg I lit respective. Also the avarage rate of chlorophyll a in these two areas measured 58,38 and 40.45 j.un /ht respectivly. Depending on results of correlation cofficient in "Abkenar" region we had Cyanobacters , water and air temperature , Chlorophyll a and total amount of Phosphat as a poitive correlation with transparency while Amonium and Nitrat showed , a negative correlation , EC and finally dissolved oxygen showed a very low rate of correlation coffiocient. To perform this research 5 genus of Cyanobacteres horn "Anzali" lagoon have been isolated and cultured in a laboratorial conditions Later by using Mouse Bioassay method one of these genus identified as a toxic algae. Levels of LD50 with intra peritoneal injection of toxin on mouse in 24 hours was 660 mg/kg and Levels of LC50 by using Bioassay method on Artemia and Daphnia has been shown 618 and 1000 mg kg respectively. Also the physiological effects of were investigated. algae on two types of Cypronides family called Cyprinus carpi° and Hypophrthabnichthys Resultes of blood analyses of Cypronides who were feeded by toxic algae showed a significant decline (P < 0.05) in white and red blood cells and their hematocrites. Levels of LDH , SGOT and SGPT in their blood serum had a significant increase in porportion to control group (P < 0.05) but there was no evidance a differences in Total Protein levels. Pathological studies show damage and destruction of hepato pancreas and kidney of these fishes. Signs and symptoms of intoxication caused by Cyanobacter called Planktohrix agardlltii in mouse and fish show heptotoxic character. This toxin belongs to cyclicpeptides of microcystines group.

Genome mapping in aquatic animals: Progress and future perspectives

The genome of aquatic animals is poorly understood and information from different taxonomic groups is sketchy. While there have been intensive genomic studies on some fish models, investigations on other fishes and invertebrates have been scarce. Yet there are recently some coordinated studies on genome mapping in a number of aquaculture animals of economic importance. This review summarizes information available on genome mapping of the important fish models and aquaculture animals. The future perspectives of this field of studies are discussed.

Validation and in situ application of an automated dissolved nickel monitor for estuarine studies

The validation of a fully automated dissolved Ni monitor for in situ estuarine studies is presented, based on adsorptive cathodic stripping voltammetry (AdCSV). Dissolved Ni concentrations were determined following on-line filtration and UV digestion, and addition of an AdCSV ligand (dimethyl glyoxime) and pH buffer (N-2-hydroxyethylpiperazine-N′-2-ethanesulphonic acid). The technique is capable of up to six fully quantified Ni measurements per hour. The automated in situ methodology was applied successfully during two surveys on the Tamar estuary (south west Britain). The strongly varying sample matrix encountered in the estuarine system did not present analytical interferences, and each sample was quantified using internal standard additions. Up to 37 Ni measurements were performed during each survey, which involved 13 h of continuous sampling and analysis. The high resolution data from the winter and summer tidal cycle studies allowed a thorough interpretation of the biogeochemical processes in the studied estuarine system.

Interference effects in the extraction of trace metals from estuarine waters

We have found that a commonly used complexation and solvent extraction technique (using mixed dithiocarbamates/Freon/HNO3) does not always extract Cd, Co, Cu and Ni from estuarine samples with the same efficiency as from Milli-Q water. For samples collected from the Derwent Estuary (Australia), the reduced extraction efficiency only occurred for unfiltered samples, but low extraction efficiencies were also observed for a (filtered) riverine certified reference material (SLRS-3) suggesting that the effect may be widespread. We have not been able to identify the reason for the low extraction efficiency and, although it is strongly correlated with the presence of high concentrations of suspended solids, dissolved organic matter and particulate iron, we have no experimental evidence to directly link any of these parameters to the effect. It is possible that similar effects may occur in other techniques which rely on a preconcentration step prior to analysis and that some literature values of heavy metals in estuarine waters may be low. We propose a modification of the standard complexation/solvent extraction method which overcomes these difficulties without adding significantly to the time taken for analyses.

Diversity and spatial distribution of sediment ammonia-oxidizing crenarchaeota in response to estuarine and environmental gradients in the Changjiang Estuary and East China Sea

Ammonia-oxidizing archaea (AOA) have recently been found to be potentially important in nitrogen cycling in a variety of environments, such as terrestrial soils, wastewater treatment reactors, marine waters and sediments, and especially in estuaries, where high input of anthropogenic nitrogen is often experienced. The sedimentary AOA diversity, community structure and spatial distribution in the Changjiang Estuary and the adjacent East China Sea were studied. Multivariate statistical analysis indicated that the archaeal amoA genotype communities could be clustered according to sampling transects, and the station located in an estuarine mixing zone harboured a distinct AOA community. The distribution of AOA communities correlated significantly with the gradients of surface-water salinity and sediment sorting coefficient. The spatial distribution of putative soil-related AOA in certain sampling stations indicated a strong impact of the Changjiang freshwater discharge on the marine benthic microbial ecosystem. Besides freshwater, nutrients, organic matter and suspended particles, the Changjiang Diluted Water might also contribute to the transport of terrestrial archaea into the seawater and sediments along its flow path.