Foldons, protein structural modules, and exons.

Foldons, which are kinetically competent, quasi-independently folding units of a protein, may be defined using energy landscape analysis. Foldons can be identified by maxima in a scan of the ratio of a contiguous segment's energetic stability gap to the energy variance of that segment's molten globule states, reflecting the requirement of minimal frustration. The predicted foldons are compared with the exons and structural modules for 16 of the 30 proteins studied. Statistical analysis indicates a strong correlation between the energetically determined foldons and Go's geometrically defined structural modules, but there are marked sequence-dependent effects. There is only a weak correlation of foldons to exons. For gammaII-crystallin, myoglobin, barnase, alpha-lactalbumin, and cytochrome c the foldons and some noncontiguous clusters of foldons compare well with intermediates observed in experiment.

Irrigation canals in a semi-arid agricultural landscape surrounded by wetlands: Their role as a habitat for birds during the breeding season

Traditional water supply systems in semi-arid agrarian ecosystems, mainly irrigation canals, contribute to the diversity of the landscape and influence the composition of species. To evaluate their effect on bird communities in the breeding season, we selected a rural area in southeastern Spain, where an intricate and extensive network of irrigation canals and cultivated areas is located between two wetlands declared as Natural Parks. Birds were counted at representative points distributed throughout the canal network at which we recorded several variables related to the physical features, the vertical and horizontal structure of associated vegetation, reed development (Phragmites australis) and land use in the neighboring areas. We detected 37 bird species, most of which were also breeding in the wetlands nearby. We used Hierarchical Partitioning analyses to identify the variables most strongly related to the probability of the presence of selected species and species richness. Vegetation cover and height close to the canals, together with reed development, were the most important types of variables explaining species presence and richness. We found that current management practices for reeds in canals are not well-suited for biodiversity conservation. We therefore propose alternatives that could be implemented in the area in cooperation with stakeholders.

Chemical composition of zeolites in sandstones at DSDP Sites 445 and 446

Andesitic volcaniclastic sandstones of Middle Eocene age recovered from DSDP Sites 445 and 446, a back-arc basin, contain clinoptilolite, heulandite and analcite as a pore-filling cement. Clinoptilolite and heulandite at Sites 445 and 446 contain different chemical composition from other deep-sea clinoptilolites and heulandites. The dominant cation of both clinoptilolite and heulandite is Na+ ion activity in pore water was greater at the time of their formation. Volcanic glass has acted as a precursor for both clinoptilolite and heulandite at Sites 445 and 446. Biogenic silica is also suggested as a precursor. High Na+ ion activity in pore water also helped to transform clinoptilolite and heulandite to analcite downhole. The necessary Na+ ions for this clinoptilolite, heulandite and analcite at Sites 445 and 446 might have been provided by hydrothermal circulation of seawater through more permeable sandstones deposited during early stages of back-arc basin rifting.

Structure and chemistry of TECHNO encrustations

Using as a starting point the results giving 'traditional' growth rates as determined by the decrease of radioelements (part I) and the hypothesis of rapid formation, the different mineralogical, structure and chemical characteristics of the sample have been studied to try to understand the possible mode of formation of this encrustation. A rapid formation would account for (1) the very peculiar structure of the sample composed of oriented botryoids and the bundle-like structure of the outermost oxide layer; (2) the fact that this sample represents a substitution of a preexisting hyaloclastite; (3) the different chemical gradients, mainly iron, thorium and uranium; (4) the fact that this sample which cannot have been maintained at the sediment-water interface by bioturbation is not covered by a great thickness of sediments. On the other hand, an unsolved problem remains: Why different radionuclides used for dating give growth rates of the same order of magnitude and different 'exposition ages'.