Molecular epidemiology of HIV-1 in Rio Grande, RS, Brazil

We conducted a molecular epidemiological study to investigate HIV-1 strains in Rio Grande, southern Brazil, searching for an association with transmission mode and risk behavior. Patients (185) identified at an AIDS treatment reference Hospital, from 1994 to 1997, were included; from which 107 blood samples were obtained. Nested PCR was realized once for each sample; for amplified samples (69) HIV subtypes were classified using the heteroduplex mobility assay. Subtypes identified were B (75%), C (22%) and F (3%). All infections with C were diagnosed after 1994. Comparing patients with B and C, no differences were detected regarding demographic, clinical and laboratory characteristics; survival analysis did not reveal differences in HIV to AIDS evolution. A higher proportion of injecting drug users, IDU (not significant, p<.07) was found among those with C. This suggests that C may have been introduced in this area through IDU, and is being spread, probably by their sexual partners, to persons with other risk practices.

Canine rabies epidemiology in Araçatuba and neighborhood, Northwestern São Paulo State - Brazil

Epidemiological characteristics of canine rabies in the northwest region of São Paulo State (Araçatuba region), Brazil, from 1993 to 1997 are presented. Out of 1,984 dogs, a total of 351 (17.7%) were positive for rabies diagnosis; 89% (312/351) of these occurred in urban areas and 85% (266/312) of the urban positive cases were among owned dogs. The mean age of the rabid dogs was 34 months and 61% were male. Aggressive behavior was observed in 77% of rabid dogs, followed by lack of coordination and paralysis (42%) and 48% of these dogs were responsible biting people or other animals. Information about vaccination status was obtained from 182 records and 51% of rabid dogs were non-vaccinated. The number of unvaccinated rabid dogs indicates a low vaccination index and this factor added to the high dog/man ratio must have contributed to the canine rabies epizootic observed in the studied area.

Autoimmune hemolytic anemia in HCV/HIV coinfected patients during treatment with pegylated alpha-2a interferon plus ribavirin

Two cases of autoimmune hemolytic anemia that occurred during the treatment of chronic hepatitis C with pegylated alpha-2a interferon and ribavirin, in HIV coinfected patients, are presented and described. The late occurrence (after six months of therapy) of this severe hemolytic anemia leads to the recommendation that hemoglobin levels should be monitored throughout the treatment period, even among patients who presented stable hemoglobin levels in the preceding months.

Estudo da Prevalência da Malária na Mulher Grávida Submetida ao Tratamento Intermitente e Preventivo com Sulfadoxina e Pirimetamina e sua Associação com Anemia

A malária é causada por parasitas de género Plasmodium e transmitida por mosquitos fêmea do género Anopheles. A doença é endémica em regiões tropicais e intertropicais e constituí uma das maiores causas de morbilidade e mortalidade principalmente no continente Africano. Segundo os dados da OMS ocorrem anualmente 300 a 500 milhões de casos clínicos e um milhão de mortes. Durante a gravidez, a malária é frequente e mais grave, com maior incidência nos países da África subsaariana. As mulheres grávidas têm maior risco de contrair a doença e muitas vezes em formas mais graves com associação à anemia. O objectivo deste estudo foi caracterizar a ocorrência dos casos de malária em mulheres grávidas submetidas ao tratamento intermitente preventivo (TIP) com a Sulfadoxina/ Pirimetamina (SP) nas Províncias de Benguela e Huíla. Neste estudo constatamos que todas as grávidas que participaram tinham tido episódios de malária antes da gravidez quer na província de Benguela tal como na província da Huíla. No total, 633 mulheres grávidas foram analisadas e apresentavam um valor de hemoglobina abaixo dos 14g/dl. A prevalência de malária em grávidas sujeitas a TIP foi significativamente menor (p< 0.01) do que nas grávidas que não a fizeram, respectivamente 4,5% e 10,0%, conforme esperado e descrito anteriormente por outros autores. Todos os casos de malária detectados corresponderam a Plasmodium falciparum, não se tendo verificado nenhuma infecção mista, de acordo com os métodos utilizados. O valor médio da hemoglobina nas grávidas foi inferior ao esperado em grávidas seguidas em consulta pré-natal, e existe uma diferença significativa entre os valores encontrados na Província de Benguela e da Huíla (significativamente mais elevados nesta última). O teste rápido Paracheck-pf detectou a presença de Plasmodium falciparum em maior número do que a microscopia óptica. Por constrangimentos logísticos, o número de amostras submetidas a teste molecular (PCR) não foi suficiente para se tirarem conclusões.

Insights into the epidemiology of drug-resistant Streptococcus pneumoniae and closely-related streptococci in the era of conjugate vaccines

In Portugal, the introduction of the seven-valent pneumococcal conjugate vaccine (PCV7) has led to significant changes in the population structure of Streptococcus pneumoniae. However, the levels of antimicrobial resistance have not decreased and have been a matter of concern. (...)

Antimicrobial resistance and investigation of the molecular epidemiology of Listeria monocytogenes in dairy products

INTRODUCTION: Listeria monocytogenes is a ubiquitous microorganism in nature and is responsible for listeriosis, an infectious disease caused by consumption of contaminated food. METHODS: Molecular characterization was performed on 19 strains of Listeria monocytogenes (serovars 1/2a, 1/2b, 4b and 4c), isolated from dairy products in Rio Grande do Sul, Brazil. The molecular techniques applied were random amplification of polymorphic DNA and restriction enzyme analysis. In addition to the molecular analysis, the antimicrobial resistance profile was determined. RESULTS: The strains studied showed a low degree of diversity. In relation to the antimicrobial resistance profile of those microorganisms from the samples analyzed, all of them were susceptible to the antimicrobials tested. CONCLUSIONS: The molecular techniques that were used presented good discriminatory power for the strains studied. Furthermore, all of the samples that were analyzed were susceptible to the antimicrobials tested.

Epidemiology of extended spectrum β-lactamase producing Enterobacter bacteremia in a brazilian hospital

INTRODUCTION: Enterobacter can be included in the group of extended spectrum β-lactamases (EBSL)-producing bacteria, though few studies exist evaluating risk factors associated with this microorganism. A retrospective cohort study was conducted to determine risk factors associated with ESBL-producing-Enterobacter and mortality METHODS: A retrospective cohort study with 58 bacteremia caused by ESBL-producing-Enterobacter (28 cases) and non-ESBL (30 cases) RESULTS: Risk factors associated with ESBL-Enterobacter were trauma, length of hospitalization, admission to the intensive care unit, urinary catheter and elective surgery (p< 0.05). The survival curves were similar for ESBL and non-ESBL CONCLUSIONS: ESBL-producing-Enterobacter bacteremia is prevalent and the survival curve was similar to non-ESBL-producing strains.

Molecular epidemiology and virulence factors in Streptococcus agalactiae

Fundação para a Ciência e a Tecnologia (FCT) - PhD Project (SFRH/BD/48231/2008: PTDC/SAU-MII/105114/2008 and DAAD scholarship/2010)

Trauma and envenoming caused by stingrays and other fish in a fishing community in Pontal do Paranapanema, state of São Paulo, Brazil: epidemiology, clinical aspects, and therapeutic and preventive measures

INTRODUCTION: Accidents caused by fish are common in inland fishing communities in Brazil, being work-related injuries in the majority of cases. These populations have no information on the mechanisms of trauma or envenoming. METHODS: Through a questionnaire administered to fishermen, we obtained clinical and epidemiological data on accidents in Rosana, Pontal do Paranapanema, State of São Paulo, Brazil. These data were analyzed and converted into an easily understood prevention and treatment program for the colony. RESULTS: Thirty-nine fishermen replied to the survey. All of the patients had been hurt by fish. Of those mentioned, the yellow catfish (Pimelodus maculatus) was the main fish species associated with injuries, but others also caused trauma to the fishermen. Six fishermen had been envenomed by stingrays. Pain and ulcers were the main symptoms and were described as intolerable. Approximately half of those injured were treated using traditional folk remedies. CONCLUSIONS: The fishermen suffered multiple accidents with catfish, which are venomous and cause intense pain, as well as trauma due to other fish, such as surubins, traíras, freshwater croakers, and piranhas. Approximately 16% of those interviewed presented with envenomation from stingrays. Our data and previous experience in the area led to the creation of a pamphlet with clear language that can effectively help fishermen in the region, an area in need of health services and disease prevention. This initiative also applies to the whole La Plata River basin, which has similar fauna.

Molecular epidemiology of hepatitis B virus among the indigenous population of the Curuçá and Itaquaí Rivers, Javari Valley, State of Amazonas, Brazil

INTRODUCTION: Hepatitis B virus (HBV) infection is one of the most serious public health problems in the world. In Brazil, HBV endemicity is heterogeneous, with the highest disease prevalence in the North region. METHODS: A total of 180 samples were analyzed and subjected to polymerase chain reaction (PCR) and semi-nested PCR of the HBV S-gene, with the aim of determining the prevalence of HBV-DNA (deoxyribonucleic acid) in indigenous groups inhabiting the areas near the Curuçá and Itaquaí Rivers in the Javari Valley, State of Amazonas, Brazil. RESULTS: The prevalence of the HBV-DNA S-gene was 51.1% (92/180). The analysis found 18 of 49 (36.7%) samples from the Marubo tribe, 68 of 125 (54.4%) from the Kanamary, and 6 of 6 (100%) from other ethnic groups to be PCR positive. There was no statistically significant difference in gender at 5% (p=0.889). Indigenous people with positive PCR for HBV-DNA had a lower median age (p<0.001) of 23 years. There was no statistical difference found in relation to sources of contamination or clinical aspects with the PCR results, except for fever (p<0.001). The high prevalence of HBV-DNA of 75% (15/20) in pregnant women (p=0.009) demonstrates an association with vertical transmission. CONCLUSIONS: The results confirm the high prevalence of HBV-DNA in the Javari Valley, making it important to devise strategies for control and more effective prevention in combating the spread of HBV.

Epidemiology of malaria in the municipality of Cruzeiro do Sul, State of Acre, Brazil, in 2010: uses of a control chart at the local level

INTRODUCTION: This study describes the uses of a control chart in the malaria surveillance at the local level, signaling whether there is a need to intensify or adapt control measures. METHODS: The districts of Cruzeiro do Sul (n=14), State of Acre, Brazil, were classified into three groups: I) those with an incidence lower than expected; II) those with an incidence within the expected range; and III) those with an epidemic. RESULTS: Thirteen of the fourteen districts had outbreaks of malaria at some point in 2010, and six districts showed persistent malaria epidemic throughout the year. CONCLUSIONS: The control chart may help the malaria control at the local level.

Prevalência de parasitas intestinais em crianças a frequentar a escola primária no Bairro Lucrécia, no Lubango, Angola, e sua relação com o estado nutricional e anemia

Introdução: Os parasitas intestinais são responsáveis por morbilidade em crianças de todo mundo, em especial nos países de baixa renda. Os estudos têm vindo a demonstrar o seu impacto negativo no estado nutricional e o seu contributo na etiologia da anemia. Pretendeu-se determinar a prevalência de parasitas intestinais em crianças dos 5 aos 12 anos de idade, a frequentar a escola primária no Bairro Lucrécia, no Lubango, Angola, e explorar a sua relação com o estado nutricional e anemia. Material e Métodos: Foi efectuado um estudo observacional, transversal e analítico, cuja colheita de dados se realizou entre Setembro e Outubro de 2010. A amostra foi constituída por 328 crianças. Realizou-se a detecção microscópica de parasitas intestinais e identificação molecular dos parasitas Entamoeba histolytica e Entamoeba dispar. O estado nutricional foi avaliado através dos z-scores do peso para a idade, da estatura para a idade e do IMC para a idade. A concentração de hemoglobina foi determinada através de um hemoglobinómetro portátil. Resultados: A prevalência de parasitas intestinais patogénicos foi de 44,2%, destacando-se Ascaris lumbricoides com 22,0%, Giardia lamblia com 20,1% e Hymenolepis nana com 8,8%. Na microscopia foi encontrada uma prevalência de Entamoeba histolytica/dispar de 13,7%, tendo sido posteriormente identificada, por diagnóstico molecular, uma prevalência de 13,1% para E. dispar e 0,3% para E. histolytica. A prevalência de baixo peso, subnutrição crónica e subnutrição aguda foi de, respectivamente, 36,1%, 41,5% e 30,2%. A probabilidade das crianças terem subnutrição crónica ou subnutrição aguda aumentou com o facto de terem 10 anos ou mais. As crianças co-infectadas por protozoários e helmintas apresentaram uma maior probabilidade de terem subnutrição crónica. A prevalência de anemia foi de 21,6%, encontrando-se a mesma significativamente associada à infecção por H. nana. A probabilidade das crianças estarem anémicas aumentou com o facto de terem menos de 10 anos. Adicionalmente nas crianças desparasitadas com albendazol ou mebendazol há 2 meses e meio ou menos verificou-se uma maior prevalência de infecção por G. lamblia (28,6%) em comparação com as desparasitadas há mais de 2 meses e meio (13,7%), tendo sido essa diferença estatisticamente significativa. Discussão e Conclusões: Emergiu deste estudo a importância da co-infecção com helmintas e protozoários no aumento da probabilidade das crianças terem subnutrição crónica e foi encontrada uma associação estatisticamente significativa entre a infecção por H. nana e a anemia. Será importante desenhar futuros estudos que investiguem o poder patogénico do H. nana e o modo como é efectuada a desparasitação com albendazol ou mebendazol, pois ao ser eficaz contra a infecção por A. lumbricoides, poderá aumentar a susceptibilidade à infecção por G. lamblia.

Epidemiology of the viral hepatitis B and C in female prisoners of Metropolitan Regional Prison Complex in the State of Goiás, Central Brazil

INTRODUCTION: Little information regarding hepatitis B virus (HBV) and hepatitis C virus (HCV) infections among Brazilian female prisoners exists. This study investigated the prevalence and risk factors associated with HBV and HCV infections and identified viral genotypes among female prisoners in Goiás, Central Brazil. METHODS: Women incarcerated in the largest prison in the State of Goiás were invited to participate in the study. All female prisoners were interviewed and tested for the detection of hepatitis B surface antigen (HBsAg), antibodies against HBsAg (anti-HBs), against hepatitis B core antigen (anti-HBc), and antibody against HCV (anti-HCV) by ELISA. HBsAg and anti-HCV positive samples were tested for HBV DNA and HCV RNA and genotyped, respectively. RESULTS: Participants (n=148; 98.6%) completed the study with an overall HBV prevalence of 18.9%. Age >30 years, a low education level, sex with a sexually transmitted diseases carrier, and a male sexual partner serving in the same penitentiary were associated with HBV infections. Only 24% of the women were anti-HBs positive suggesting previous HBV vaccination. Nine female prisoners (6.1%) were anti-HCV positive. Age >40 years, injecting drug use and length of incarceration were statistically associated with anti-HCV antibodies. Five samples were HCV RNA positive and classified as genotypes 1 (subtypes 1a; n=3 and 1b; n=1) and 3 (subtype 3a; n=1). The HBsAg-reactive sample was HBV DNA positive and genotype A. CONCLUSIONS: These findings highlight the necessity of public policies to control hepatitis B and C infections and emphasize the importance of hepatitis B vaccination in prison environments.

Epidemiology of hepatitis B virus infection among recyclable waste collectors in central Brazil

Introduction: The collection of recyclable waste materials is a widespread activity among the urban poor. Today, this occupation attracts an increasingly large number of individuals. Despite its economic and environmental importance, this activity is associated with unsafe and unhealthy working conditions. The aim of this study was to investigate the seroepidemiological profile of hepatitis B virus (HBV) infection in a population of recyclable waste collectors in central Brazil. Methods: Recyclable waste collectors from all 15 recycling cooperatives in Goiânia City were invited to participate in the study. The participants (n = 431) were interviewed and screened for hepatitis B surface antigen (HBsAg) and antibodies against HBsAg (anti-HBs) and hepatitis B core antigen (anti-HBc) by enzyme-linked immunosorbent assay (ELISA). HBsAg- and anti-HBc-positive samples were tested for HBV DNA and genotyped. Results: The overall prevalence of HBV infection (HBsAg- and/or anti-HBc-positive) was 12.8%. An age over 40 years and illicit drug use were associated with HBV infection. HBV DNA was detected in 2/3 HBsAg-positive samples and in 1/52 anti-HBc-positive/HBsAg-negative samples (an occult HBV infection rate of 1.9%), in which the genotypes/subgenotypes A/A1, D/D3 and F/F2 were identified. Only 12.3% of the recyclable waste collectors had serological evidence of previous HBV vaccination. Conclusions: These findings highlight the vulnerability of recyclable waste collectors to HBV infection and reinforce the importance of public health policies that address the health and safety of this socially vulnerable population.

Viral epidemiology of respiratory infections among children at a tertiary hospital in Southern Brazil

Introduction This study reports the pediatric epidemiology of respiratory syncytial virus (RSV), influenza (IF), parainfluenza (PIV), and adenovirus (ADV) at Hospital de Clínicas de Porto Alegre. Methods Cases of infection, hospitalizations in intensive care units (ICUs), nosocomial infections, and lethality rates were collected from 2007 to 2010. Results RSV accounted for most nosocomial infections. Intensive care units admission rates for ADV and RSV infections were highest in 2007 and 2010. During 2008-2009, H1N1 and ADV had the highest ICU admission rates. ADV had the highest fatality rate during 2007-2009. Conclusions Each virus exhibited distinct behavior, causing hospitalization, outbreaks, or lethality.