Plasmid DNA partitioning and separation using poly(ethylene glycol)/poly(acrylate)/salt aqueous two-phase systems

Phase diagrams of poly(ethylene glycol)/polyacrylate/Na2SO4 systems have been investigated with respect to polymer size and pH. Plasmid DNA from Escherichia coil can depending on pH and polymer molecular weight be directed to a poly(ethylene glycol) or to a polyacrylate-rich phase in an aqueous two-phase system formed by these polymers. Bovine serum albumin (BSA) and E. coil homogenate proteins can be directed opposite to the plasmid partitioning in these systems. Two bioseparation processes have been developed where in the final step the pDNA is partitioned to a salt-rich phase giving a total process yield of 60-70%. In one of them the pDNA is partitioned between the polyacrylate and PEG-phases in order to remove proteins. In a more simplified process the plasmid is partitioned to a PEG-phase and back-extracted into a Na2SO4-rich phase. The novel polyacrylate/PEG system allows a strong change of the partitioning between the phases with relatively small changes in composition or pH. (C) 2012 Elsevier B.V. All rights reserved.

Protein partitioning in poly(ethylene glycol)/sodium polyacrylate aqueous two-phase systems

The partition of hemoglobin, lysozyme and glucose-6-phospate dehydrogenase (G6PDH) in a novel inexpensive aqueous two-phase system (ATPS) composed by poly(ethylene glycol) (PEG) and sodium polyacrylate (NaPA) has been studied. The effect of NaCl and Na2SO4, pH and PEG molecular size on the partitioning has been studied. At high pH (above 9), hemoglobin partitions strongly to the PEG-phase. Although some precipitation of hemoglobin occurs, high recovery values are obtained particularly for lysozyme and G6PDH. The partitioning forces are dominated by the hydrophobic and electrochemical (salt) effects, since the positively charged lysozyme and negatively charged G6PDH partitions to the non-charged PEG and the strongly negatively charged polyacrylate enriched phase, respectively. (c) 2007 Elsevier B.V. All rights reserved.

Recursive renormalization of the singlet one-pion-exchange plus point-like interactions

The subtracted kernel approach is shown to be a powerful method to be implemented recursively in scattering equations with regular plus point-like interactions. The advantages of the method allows one to recursively renormalize the potentials, with higher derivatives of the Dirac-delta, improving previous results. The applicability of the method is verified in the calculation of the 1 So nucleon-nucleon phase-shifts, when considering a potential with one-pion-exchange plus a contact interaction and its derivatives. The S-1(0) renormalization parameters are fitted to the data. The method can in principle be extended to any derivative order of the contact interaction, to higher partial waves and to coupled channels. (c) 2005 Elsevier B.V. All rights reserved.

Food partitioning between breeding White-tailed Kites (Elanus leucurus; Aves; Accipitridae) and Barn Owls (Tyto alba; Aves; Tytonidae) in southern Brazil

Fundação de Amparo à Pesquisa do Estado de São Paulo (FAPESP)

The effects of bacterial leaching on metal partitioning in sewage sludge

The partitioning of Mn, Al, Zn, Cu and Ti ions in municipal sewage sludge was investigated before and after bioleaching processes effectuated by Acidithiobacillus ferrooxidans and Acidithiobacillus thiooxidans. Oxidation reduction potential increase and pH decrease were obtained as a result of bacterial activity. A less pronounced and constant decrease was obtained with A. ferrooxidans, whereas A. thiooxidans presented a lag phase before a steep pH decrease. Metal solubilization was accomplished in experimental systems supplemented with energy source, Fe2+ for A. ferrooxidans and S-0 for A. thiooxidans. Solubilization efficiency differed for each metal except for Al, and was relatively similar for either organism. Metal partitioning was conducted using five-step sequential extraction procedure before and after the bioleaching. The results indicated that Zn and Mn ions were mostly associated with the organic fraction, whereas Cu, Al and Ti ions with the sulphide/ residue fraction. The bioleaching process caused prompt solubilization of metals mostly associated with the more labile fractions (exchangeable, adsorbed and organically bound metals), whereas those associated to the less labile ones (EDTA and sulphide/residue fractions) were exchanged towards more labile fractions.

Biological leaching of Mn, Al, Zn, Cu and Ti in an anaerobic sewage sludge effectuated by Thiobacillus ferrooxidans and its effect on metal partitioning

The chemical fractionation and bioleaching of Mn, At, Zn, Cu and Ti in municipal sewage sludge were investigated using Thiobacillus ferrooxidans as leaching microorganism. As a result of the bacterial activity, ORP increase and pH reduction were observed. Metal solubilization was accomplished only in experimental systems supplemented with energy source (Fe(II)). The solubilization efficiency approached similar to80% for Mn and Zn, 24% for Cu, 10% for At and 0.2% for Ti. The chemical fractionation of Mn, At, Zn, Cu and Ti was investigated using a five-step sequential extraction procedure employing KNO3. KF, Na4P2O7, EDTA and HNO3. The results show that the bioleaching process affected the partitioning of Mn and Zn, increasing its percentage of elution in the KNO3 fraction while reducing it in the KF, Na4P2O7 and EDTA fractions. No significant effect was detected on the partitioning of Cu and Al. However, quantitatively the metals Mn, Zn, Cu and At were extracted with higher efficiency after the bacterial activity. Titanium was unaffected by the bioleaching process in both qualitative and quantitative aspects. (C) 2002 Elsevier B.V. Ltd. All rights reserved.

POTASSIUM ABSORPTION AND PARTITIONING IN COTTON AS AFFECTED BY PERIODS OF POTASSIUM-DEFICIENCY

Cotton (Gossypium hirsutum var. Latifolium) was grown in nutrient media, at two K levels: 58.5 mg/K and 11.7 mg/K. Potassium deficiency (11.7 mg K/g of K) was imposed upon cotton plants at different stages of plant development. A sequence of increasing sensitivity to K deficiency among cotton plant parts was observed: leaves < bolls < roots < stems. When K deficiency symptoms are clearly visible in the leaves, all the other plant parts are already affected. Bolls are a very important component in K partitioning within the cotton plant, but K is required most by the bur itself and is not translocated to seeds or fibers. Cotton could overcome a 30 day deficiency late in the season without significant losses in lint and seed cotton yields.

Partitioning of the glucoamylase activity at the cell surfaces in cultures of Saccharomyces

Glucoamylases have been used with alpha-amylases for the industrial conversion of starch into glucose. However, little is known about the properties of this glycosylated protein retained in the cell wall of Saccharomyces as well as its role in the saccharification and fermentation of amylaceous substrates, notably in high cell density processes. In most of the strains assayed, decreases in biomass formation were followed by increases in glucoamylase secretion (expressed as U/mg(biomass) in 1 ml of culture) when glucose was exchanged for starch as carbon source or the growth temperature was raised from 30 to 35 degrees C. Despite the losses in viability, significant increases in the activity of the wall fraction occurred when cultures of thermotolerant yeasts propagated at 30 degrees C or washed cells resuspended in buffer solution were heated to 60 degrees C for 60-80 min prior to amylolytic assays. Thus, intact cells of thermotolerant yeasts can be used as colloidal biocatalysts in starch degradation processes. (C) 2005 Published by Elsevier Ltd.

Food resources partitioning among sciaenid fishes (Perciformes, Sciaenidae) of the Flamengo bay, Ubatuba, southeastern Brazil

The determination of the diet and feeding habits is one of the principal aspects of the study on fish biology, as feeding is a basic process and its study is necessary for the understanding of the populations' dynamic and ecology. The Sciaenidae family has a significant occurrence in the bay's demersal ichthyofauna, constituting an important fishing resource. The goal of this work was to analyze how the partitioning of available food resources takes place among the ten sciaenid species which live in the Flamengo Bay. One single survey, consisting of three trawls, was carried out with a fishing boat equipped with two otter-trawl. Diet analysis showed that all species are exclusively carnivore, using several items as food, but crustaceans are the main food ingested. The use of the ''Proportional Overlap Index'' showed possible overlapping between six couples of species but in the majority of cases, morphologic differences between these species, such as the mouth position, probably determine different foraging strategies.

Magnesium levels in nutrient solution and common bean (Phaseolus vulgaris L cv Carioca) development. Evaluation of the growth relations and assimilate partitioning

The effect of magnesium levels in nutrient solution upon relation between shoot and root, leaf weight ratio and assimilate partitioning of common bean (Phaseolus vulgaris L. cv Carioca) was studied. Bean plants (3 per pot) were grown in 6 l pots containing Hoagland & Arnon n. 2 solution modified to obtain 2.4, 24.3, 48.6, 72.9 and 97.2 ppm of magnesium. The experimental design was a completely randomized factorial replicated 3 times with 5 levels of magnesium and 5 samplings wich were done forthnightly. Therefore, it may be suggested that the 48.6 ppm of magnesium level proposed by Hoagland & Amen (1950) is the best choice for the common bean, according to the conditions of this experiment. Magnesium concentrations over 48.6 ppm didn't show significant alterations of the evaluated parameters. Nutrient solution with 2.4 ppm of magnesium content provides higher efficiency to the common bean plants during almost all its cycle, except the final of the reproductive phase. These results suggest that magnesium concentration increased to 48.6 ppm, in the cycle final perhaps could increase the productivity.

Resource partitioning among epigaeic and hypogaeic ants (Hymenoptera: Formicidae) of a Brazilian cocoa plantation

Patterns of dietary and foraging strata utilization by the ground ant community of a Brazilian cocoa planatation were examined using sugar, meat and flour baits on the surface as well as buried. A total of 49 ant species was recorded, including 10 species of Pheidole. Strong dominance was exercised by Solenopsis geminata at both surface and subterranean strata, and at all food resources. The dissimilarity matrix of the epigaeic ant fauna was much greater than that for the hypogaeic species. At least four guilds were identified: the fungus-growing ants, epigaeic nectivores, epigaeic carnivores, and hypogaeic foragers. Niche breadth reduction, leading to the formation of guilds, permits the coexistence of many species in the this ground ant community from a tropical cocoa plantation. -Authors

A recursive approach to space resection using straight lines

An approach using straight lines as features to solve the photogrammetric space resection problem is presented. An explicit mathematical model relating straight lines, in both object and image space, is used. Based on this model, Kalman Filtering is applied to solve the space resection problem. The recursive property of the filter is used in an iterative process which uses the sequentially estimated camera location parameters to feedback to the feature extraction process in the image. This feedback process leads to a gradual reduction of the image space for feature searching, and consequently eliminates the bottleneck due to the high computational cost of the image segmentation phase. It also enables feature extraction and the determination of feature correspondence in image and object space in an automatic way, i.e., without operator interference. Results obtained from simulated and real data show that highly accurate space resection parameters are obtained as well as a progressive processing time reduction. The obtained accuracy, the automatic correspondence process, and the short related processing time show that the proposed approach can be used in many real-time machine vision systems, making possible the implementation of applications not feasible until now.

Transpressional tectonics and strain partitioning during oblique collision between three plates in the Precambrian of southeast Brazil

This paper is part of the special publication Continental transpressional and transtensional tectonics (eds R.E. Holdsworth, R.A. Strachan and J.F. Dewey). Two orogenic belts have been recognized in south- east Brazil, which are interpreted to have been formed as a product of diachronous collisions between three continental plates. Wide crustal-scale shear belts have developed both between and inboard of the collided and amalgamated plate borders. These shear belts record frontal, oblique or lateral displacements during oblique plate convergence and A-type subduction. The overall structural style of each belt depends on the angle subtended between the plate boundary and the convergence vector. The E-W branch between the Sao Paulo and Brasilia plates the Campo do Meio strike-slip shear belt, has undergone dominantly sinistral wrench dominated transpression along a set of folds and shear zones dipping southwards. The NE-SW branch between the Sao Paulo and Vitoria plates, the Paraiba do Sul strike-slip shear belt, has undergone a partitioned dextral transpression, whereas the north-south branch between the Brasilia and Vitoria plates is essentially a frontal thrust system with only a weak component of dextral strike-slip. These complex structural patterns, formed at deep to mid-crustal levels, reflect temporal and spatial partitioning at all scales between flattening and non- coaxial deformation, and down-dip and strike-slip shearing, in tangential as well as in transcurrent structural domains. Additionally, this area demonstrates that regional flower structures, lateral extrusion and other secondary deformations across the yz sections of transpressional belts are important in accommodating shortening in obliquely convergent orogens.