Seasonality and geographical occurrence of West Nile fever and distribution of Asian tiger mosquito

The importance and risk of emerging mosquito borne diseases is going to increase in the European temperate areas due to climate change. The present and upcoming climates of Transdanubia seem to be suitable for the main vector of Chikungunya virus, the Asian tiger mosquito, Aedes albopictus Skuse (syn. Stegomyia albopicta). West Nile fever is recently endemic in Hungary. We used climate envelope modeling to predict the recent and future potential distribution/occurrence areas of the vector and the disease. We found that climate can be sufficient to explain the recently observed area of A. albopictus, while in the case of West Nile fever, the migration routes of reservoir birds, the run of the floodplains, and the position of lakes are also important determinants of the observed occurrence.

(Table I-II) Station details and isopoda abundance of samples taken during POLARSTERN cruise ANT-XV/3 to the eastern Weddell Sea and King George Island

Abundance, diversity, and distribution of suprabenthic Isopoda caught from a water layer between 0.27 to 0.60 m above the seafloor were analysed. The samples were taken during the ANT XV/3 cruise on RV Polarstern by means of an epibenthic sledge along two transects in the southern Weddell Sea (Vestkapp and Halley Bay) and another one east of King George Island. At each of these three bathymetric transects, five to six stations were sampled between 200 and 2000 m. In total, 4258 specimens of isopods were sampled at 14 stations standardized to 1000 m2 hauls. 114 species were identified from 49 genera and 23 higher taxa (families and suborders) of Isopoda. Most of them belonged to the suborder Asellota. Dominant families are Munnopsididae (Eurycopinae, Ilyarachninae), Joeropsidae, Munnidae, Paramunnidae, Ischnomesidae and Desmosomatidae. No striking differences were found between areas (Vestkapp, Halley Bay, Kapp Norvegia, and Bransfield Strait). Overall isopod abundances were highest at the shallowest station; species richness was slightly higher above 1000 m depth.

Prevalence of haemosporidians in a Neotropical endemic bird area

Haemosporidians are vector-transmitted intracellular parasites that occur in many bird species worldwide and may have important implications for wild bird populations. Surveys of haemosporidians have traditionally focused on Europe and North America, and only recently have they been carried out in the Neotropics, where the prevalence and impacts of the disease have been less studied and are not well understood. In this study we carried out a survey in the endemic bird area of the Sierra Nevada de Santa Marta (SNSM), an isolated coastal massif in northern Colombia that contains a large number of biomes and that is experiencing high rates of habitat loss. We sampled birds from 25 species at 2 different altitudes (1640 and 2100 m asl) and determined avian haemosporidian infection by polymerase chain reaction and sequencing a portion of the cytochrome b (cyt b) gene of the parasite. From the sampled birds, 32.1% were infected by at least 1 of 12 unique cyt b lineages of haemosporidian genera: Plasmodium, Leucocytozoon, Haemoproteus, and subgenus Parahaemoproteus. We found a higher prevalence of avian haemosporidians at low altitudes (1640 m asl). All endemic bird species we sampled had at least one individual infected with avian haemosporidians. We also found evidence of higher overall prevalence among endemic rather than nonendemic birds, suggesting higher susceptibility in endemic birds. Overall, our findings suggest a high haemosporidian species richness in the bird community of the SNSM. Considering the rate of habitat loss that this area is experiencing, it is important to understand how avian haemosporidians affect bird populations; furthermore, more exhaustive sampling is required to fully comprehend the extent of avian haemosporidian infection in the area.

Magnetic susceptibility and particle size for the Shilou red clay section on the eastern Chinese Loess Plateau

The Chinese Loess Plateau red clay sequences display a continuous alternation of sedimentary cycles that represent recurrent climatic fluctuations from 2.58 Ma to the Miocene. Deciphering such a record can provide us with vital information on global and Asian climatic variations. Lack of fossils and failure of absolute dating methods made magnetostratigraphy a leading method to build age models for the red clay sequences. Here we test the magnetostratigraphic age model against cyclostratigraphy. For this purpose we investigate the climate cyclicity recorded in magnetic susceptibility and sedimentary grain size in a red clay section previously dated 11Myr old with magnetostratigraphy alone. Magnetostratigraphy dating based on only visual correlation could potentially lead to erroneous age model. In this study the correlation is executed through the iteration procedure until it is supported by cyclostratigraphy; i.e., Milankovitch cycles are resolved in the best possible manner. Our new age model provides an age of 5.2Ma for the Shilou profile. Based on the new age model, wavelet analysis reveals the well-preserved 400 kyr and possible 100 kyr eccentricity cycles on the eastern Chinese Loess Plateau. Further, paleomonsoon evolution during 2.58-5.2Ma is reconstructed and divided into three intervals (2.58-3.6Ma, 3.6-4.5Ma, and 4.5-5.2Ma). The upper part, the youngest stage, is characterized by a relatively intensified summer monsoon, the middle stage reflects an intensification of the winter monsoon and aridification in Asia, and the earliest stage indicates that summer and winter monsoon cycles may have rapidly altered. The use of cyclostratigraphy along withmagnetostratigraphy gives us an effectivemethod of dating red clay sequences, and our results imply that many presently published age models for the red clay deposits should be perhaps re-evaluated.

Fossil associations from the middle and upper Eocene strata of the Pamplona Basin and surrounding areas (Navarre, western Pyrenees)

Fossil associations from the middle and upper Eocene (Bartonian and Priabonian) sedimentary succession of the Pamplona Basin are described. This succession was accumulated in the western part of the South Pyrenean peripheral foreland basin and extends from deep-marine turbiditic (Ezkaba Sandstone Formation) to deltaic (Pamplona Marl, Ardanatz Sandstone and Ilundain Marl formations) and marginal marine deposits (Gendulain Formation). The micropalaeontological content is high. It is dominated by foraminifera, and common ostracods and other microfossils are also present. The fossil ichnoasssemblages include at least 23 ichnogenera and 28 ichnospecies indicative of Nereites, Cruziana, Glossifungites and ?Scoyenia-Mermia ichnofacies. Body macrofossils of 78 taxa corresponding to macroforaminifera, sponges, corals, bryozoans, brachiopods, annelids, molluscs, arthropods, echinoderms and vertebrates have been identified. Both the number of ichnotaxa and of species (e. g. bryozoans, molluscs and condrichthyans) may be considerably higher. Body fossil assemblages are comparable to those from the Eocene of the Nord Pyrenean area (Basque Coast), and also to those from the Eocene of the west-central and eastern part of South Pyrenean area (Aragon and Catalonia). At the European scale, the molluscs assemblages seem endemic from the Pyrenean area, although several Tethyan (Italy and Alps) and Northern elements (Paris basin and Normandy) have been recorded. Palaeontological data of studied sedimentary units fit well with the shallowing process that throughout the middle and late Eocene occurs in the area, according to the sedimentological and stratigraphical data.

A metagenomic comparison of endemic viruses from broiler chickens with runting stunting syndrome and from normal birds

Runting-stunting syndrome (RSS) in broiler chickens is an enteric disease that causes significant economic losses to poultry producers worldwide due to elevated feed conversion ratios, decreased body weight during growth, and excessive culling. Of specific interest are the viral agents associated with RSS which have been difficult to fully characterise to date. Past research into the aetiology of RSS has implicated a wide variety of RNA and DNA viruses however, to date, no individual virus has been identified as the main agent of RSS and the current opinion is that it may be caused by a community of viruses, collectively known as the virome. This paper attempts to characterise the viral pathogens associated with 2 – 3 week old RSS-affected and unaffected broiler chickens using next-generation sequencing and comparative metagenomics. Analysis of the viromes identified a total of 20 DNA & RNA viral families, along with 2 unidentified categories, comprised of 31 distinct viral genera and 7 unclassified genera. The most abundant viral families identified in this study were the Astroviridae, Caliciviridae, Picornaviridae, Parvoviridae, Coronaviridae, Siphoviridae, and Myoviridae. This study has identified historically significant viruses associated with the disease such as chicken astrovirus, avian nephritis virus, chicken parvovirus, and chicken calicivirus along with relatively novel viruses such as chicken megrivirus and sicinivirus 1 and will help expand the knowledge related to enteric disease in broiler chickens, provide insights into the viral constituents of a healthy avian gut, and identify a variety of enteric viruses and viral communities appropriate for further study.

Peripheral communities of the Eastern Lau Spreading Center and Valu Fa Ridge: community composition, temporal change and comparison to near-vent communities

Western Pacific hydrothermal vents will soon be subjected to deep-sea mining and peripheral sites are considered the most practical targets. The limited information on community dynamics and temporal change in these communities makes it difficult to anticipate the impact of mining activities and recovery trajectories. We studied community composition of peripheral communities along a cline in hydrothermal chemistry on the Eastern Lau Spreading Center and Valu Fa Ridge (ELSC-VFR) and also studied patterns of temporal change. Peripheral communities located in the northern vent fields of the ELSC-VFR are significantly different from those in the southern vent fields. Higher abundances of zoanthids and anemones were found in northern peripheral sites and the symbiont-containing mussel Bathymodiolus brevior, brisingid seastars and polynoids were only present in the northern peripheral sites. By contrast, certain faunal groups were seen only in the southern peripheral sites, such as lollipop sponges, pycnogonids and ophiuroids. Taxonomic richness of the peripheral communities was similar to that of active vent communities, due to the presence of non-vent endemic species that balanced the absence of species found in areas of active venting. The communities present at waning active sites resemble those of peripheral sites, indicating that peripheral species can colonize previously active vent sites in addition to settling in the periphery of areas of venting. Growth and mortality were observed in a number of the normally slow-growing cladorhizid stick sponges, indicating that these animals may exhibit life history strategies in the vicinity of vents that differ from those previously recorded. A novel facultative association between polynoids and anemones is proposed based on their correlated distributions.

Hydrothermal-vent alvinellid polychaete dispersal in the eastern Pacific .1. Influence of vent site distribution, bottom currents, and biological patterns

Deep-sea hydrothermal-vent habitats are typically linear, discontinuous, and short-lived. Some of the vent fauna such as the endemic polychaete family Alvinellidae are thought to lack a planktotrophic larval stage and therefore not to broadcast-release their offspring. The genetic evidence points to exchanges on a scale that seems to contradict this type of reproductive pattern. However, the rift valley may topographically rectify the bottom currents, thereby facilitating the dispersal of propagules between active vent sites separated in some cases by 10s of kilometers or more along the ridge axis. A propagule flux model based on a matrix of intersite distances, long-term current-meter data, and information on the biology and ecology of Alvinellidae was developed to test this hypothesis. Calculations of the number of migrants exchanged between two populations per generation (N-m) allowed comparisons with estimates obtained from genetic studies. N, displays a logarithmic decrease with increasing dispersal duration and reaches the critical value of 1 after 8 d when the propagule Aux model was run in standard conditions. At most, propagule traveling time cannot reasonably exceed 15-30 d, according to the model, whereas reported distances between sites would require longer lasting dispersal abilities. Two nonexclusive explanations are proposed. First, some aspects of the biology of Alvinellidae have been overlooked and long-distance dispersal does occur. Second, such dispersal never occurs in Alvinellidae, but the spatial-temporal dynamics of vent sites over geological timescales allows short-range dispersal processes to maintain gene flow.

Underwater survey of ichthyofauna of eastern Atlantic seamounts: Gettysburg and Ormond (Gorringe Bank)

Gettysburg and Ormond are seamounts belonging to the Gorringe Bank, which is located on the Europen-African plate boundary. Given the importance of these oceanic features for understanding marine biodiversity patterns, two surveys were carried out in 1998 (Gettysburg) and 1999 (Ormond) using diving, photography and video for species identification and abundance evaluation. Of the 9 fish species found at Gettysburg and 11 at Ormond, 6 were common to both sites and these included the dominant species: the oceanic and commercially important, Seriola rivoliana, and the coastal, typically Atlantic-Mediterranean Coris julis and Anthias anthias. The strong representation of coastal, demersal and Atlantic-Mediterranean species in the Gorringe Bank region and the presence of Abudefduf luridus, an endemic Macaronesian species, at Gettysburg suggests that the upper part of these seamounts may have acted and still act as “stepping stones” for the dispersal of coastal species.