Benthic foraminifera of surface samples and sediment cores off Senegal and Gambia, West Africa

Water depth zonation of fifty nine benthonic foraminiferal species in marine sediment surfaces has been described. Some species are combined to groups which mark particular depth zones: an upper and lower shelf-fauna, an upper and lower slope fauna, and a shelf-slope fauna. Dependence on latitude could be ascertained for Textularia panamensis, and submergence effects for Hyalinea balthica.

Absolute abundances of benthic foraminifers and stable isotopes from the Alvin dives 3709-3712

The presence of gas hydrates on the Blake Ridge diapir, northeastern Atlantic Ocean, offers an opportunity to study the impact of methane seepage on the ecology and geochemistry of benthic foraminifera in the late Holocene. Three push cores, covering a time span of ~ 1000 yrs, were retrieved from three distinct microhabitats at the top of the diapir at a water depth of ~ 2150 m: (i) sediments away from seepage (control core), (ii) sediments overlain by clusters of methanotrophic and thiotrophic bivalves, and (iii) chemoautotrophic microbial mats. The foraminiferal assemblages at the two seep sites are marked by a reduction in benthic foraminiferal species diversity, coupled with a near-absence of agglutinated species. However, an opportunistic population rise in CH4- or H2S-tolerant calcareous species (e.g., Globocassidulina subglobosa and Cassidulina laevigata) that utilize the abundant trophic resources at the seeps has led to an increase in the overall assemblage density there. The delta18O and delta13C values of three species of benthic foraminifera - Gyroidinoides laevigatus, Globocassidulina subglobosa, and Uvigerina peregrina - and the planktonic species Globorotalia menardii were acquired from all three cores. The benthic species from methane seeps yield delta13C values of 0.1 to - 4.2 (per mil VPDB), that are distinctly more 13C-depleted relative to the delta13C of 0.4 to - 1.0 (per mil VPDB) at the control (off seep) site. The species from a mussel-bed site exhibit more negative delta13C values than those from microbial mats, possibly reflecting different food sources and higher rate of anaerobic oxidation of methane. The positive delta13C values in the paired planktonic species suggest that authigenic carbonate precipitation did not overprint the observed 13C depletions. Hence the probable cause of negative delta13C of benthic foraminifera is primary calcification from Dissolved Inorganic Carbon (DIC) containing mixed carbon fractions from (a) highly 13C-depleted, microbially-oxidized methane and (b) a seawater source.

Benthic foraminifera in surface sediments of the Persian Gulf

During "Meteor"cruise 1965 the author collected 134 samples of surface sediments from the Iranian part of the Persian Gulf. Benthic Foraminifera populations have been analysed for determining their depth zonation. These data are supposed to allow detailed depth interpretation of Pleistocene sediments found in cores. In addition, the ecological information might be usefull to reconstruct the depositional environment of fossil sediments in similar shallow epicontinental seas. The investigation is published in two parts: the present part 1 contains the catalogue of species with short discussions of taxonomic problems, notes on the distribution within the Persian Gulf and 11 plates, partly with scanning electron micrographs. The results of the statistical analysis are given in data tables which include number of species, percentages of 2 (and 5) ranked species, standing crop and foraminiferal numbers. The author used "species groups" to avoid ambiguities with species requiring additional taxonomic studies. However, species numbers within these units are estimated to yield applicable diversity information. - A total of 52 species and 7 "species groups" were separated, 2 new species were described.

Distribution of molluscs on the Atlantic continental shelf off Southern Spanish Sahara, West Africa

Two hundred and seventy five mollusc species from the continental shelf off Southern Spanish Sahara (depth: 32-60 m) were identified. Their distribution pattern is strongly influenced by the nature of the bottom (firm substrate, shelter, stability of sediment) rather than other factors at that depth interval. This faunal assemblage shows great affinity to the Mediterranean and Lusitanian faunas, and comprises only few (22 %) exclusively Senegalese and species living south of Senegal.

Benthic foraminifera in the Arctic Ocean

We examine the quantitative composition of benthic foraminiferal assemblages of Rose Bengal-stained surface samples from 37 stations in the Laptev Sea, and combine this data set with an existing data set along a transect from Spitsbergen to the central Arctic Ocean. Foraminiferal test accumulation rates, diversity, faunal composition and statistically defined foraminiferal associations are analysed for living (Rose Bengal-stained) and dead foraminifers. We compare the results of several benthic foraminiferal diversity indices and statistically defined foraminiferal associations, including Fisher's alpha and Shannon-Wiener diversity indices, Q-mode principal component analysis and correspondence analysis. Diversity and faunal density (standing stock) of living benthic foraminifers are positively correlated to trophic resources. In contrast, the accumulation rate of dead foraminifers (BFAR) shows fluctuating values depending on test disintegration processes. Foraminiferal associations defined by Q-mode principal component analysis and correspondence analysis are comparable. The factor values of the correspondence analysis allow a quantitative correlation between the foraminiferal fauna and the local carbon flux, which may be used as a tool to estimate changes in primary productivity.

Communities and microhabitats of living benthic foraminifera from the tropical East Atlantic

Living (Rose Bengal stained) benthic foraminifera were collected with a multicorer from six stations between 2°N and 12°S off West Africa. The foraminiferal communities in the investigated area reflect the direct influence of different productivity regimes, and are characterized by spatially and seasonally varying upwelling activity. At five stations, foraminiferal abundance coincides well with the gradient of surface productivity. However, at one station off the Congo River, the influence of strong fresh water discharge is documented. Although this station lies directly in the center of an upwelling area, foraminiferal standing stocks are surprisingly low. It is suggested that the Congo discharge may induce a fractionation of the organic matter into small and light particles of low nutritional content, by contrast to the relatively fast-sinking aggregates found in the centers of high productivity areas. Quality and quantity of the organic matter seem to influence the distribution of microhabitats as well. The flux of organic carbon to the sea-floor controls the sequence of degradation of organic matter in sediment and the position of different redox fronts. The vertical foraminiferal stratification within sediment closely parallels the distribution of oxygen and nitrate in porewater, and reflects different nutritive strategies and adaptation to different types of organic matter. The epifauna and shallow infauna colonize oxygenated sediments where labile organic matter is available. The intermediate infauna (M. barleeanum) is linked to the zone of nitrate reduction in sediments where epifaunal and shallow infaunal species are not competitive anymore, and must feed on bacterial biomass or on metabolizable nutritious particles produced by bacterial degradation of more refractory organic matter. The deep infauna shows its maximum distribution in anoxic sediments, where no easily metabolizable organic matter is available.

CgDN24: A gene involved in hyphal development in the fungal phytopathogen Colletotrichum gloeosporioides

A cDNA corresponding to a transcript induced in culture by N starvation, was identified in Colletotrichum gloeosporioides by a differential hybridisation strategy. The cDNA comprised 905 bp and predicted a 215 aa protein; the gene encoding the cDNA was termed CgDN24. No function for CgDN24 could be predicted by database homology searches using the cDNA sequence and no homologues were found in the sequenced fungal genomes. Transcripts of CgDN24 were detected in infected leaves of Stylosanthes guianensis at stages of infection that corresponded with symptom development. The CgDN24 gene was disrupted by homologous recombination and this led to reduced radial growth rates and the production of hyphae with a hyperbranching phenotype. Normal sporutation was observed, and following conidia inoculation of S. guianensis, normal disease development was obtained. These results demonstrate that CgDN24 is necessary for normal hyphal development in axenic culture but dispensable for phytopathogenicity. (c) 2005 Elsevier GmbH. Alt rights reserved.

Data compilation on the biological response to ocean acidification: environmental and experimental context of data sets and related literature

The exponential growth of studies on the biological response to ocean acidification over the last few decades has generated a large amount of data. To facilitate data comparison, a data compilation hosted at the data publisher PANGAEA was initiated in 2008 and is updated on a regular basis (doi:10.1594/PANGAEA.149999). By January 2015, a total of 581 data sets (over 4 000 000 data points) from 539 papers had been archived. Here we present the developments of this data compilation five years since its first description by Nisumaa et al. (2010). Most of study sites from which data archived are still in the Northern Hemisphere and the number of archived data from studies from the Southern Hemisphere and polar oceans are still relatively low. Data from 60 studies that investigated the response of a mix of organisms or natural communities were all added after 2010, indicating a welcomed shift from the study of individual organisms to communities and ecosystems. The initial imbalance of considerably more data archived on calcification and primary production than on other processes has improved. There is also a clear tendency towards more data archived from multifactorial studies after 2010. For easier and more effective access to ocean acidification data, the ocean acidification community is strongly encouraged to contribute to the data archiving effort, and help develop standard vocabularies describing the variables and define best practices for archiving ocean acidification data.

Benthic foraminifera analysed in Skagerrak and Kattegat sediments

a) In der horizontalen Verbreitung sind die vorwiegend kalkschaligen Benthos-Foraminiferen im Untersuchungsgebiet auf zwei Faciesbereiche verteilt: 1. Eine sandige Facies mit stärkeren Temperatur- und Salzgehaltschwankungen; Wasseroberfläche t = 2O-17°C, Salzgehalt nie über 32 per mil, Meerestiefe 30 bis 92 m. 2. Schlick-Facies mit zum Teil feinsandigen Beimengungen. Temperatur- und Salzgehaltschwankungen sind geringer; Wasseroberfläche t = ca. 4O-15° C, Salzgehalt bis 34 per mil, Meerestiefe 135-548 m. b) Einige Stoßröhren-Proben (Station 18, 21, 27, 28) zeigen in ihrer vertikalen Verbreitung auffallende Faunenunterschiede. c) Im Profil des Lotkerns wechseln in der Foraminiferenfauna Bolivinen- und Cassidulinen-Nonioninen-Provinzen miteinander ab. Die Profile der beiden tiefsten Stoßröhren-Kerne (Station 23, 26; s. Tab. I) stimmen in ihrer Mikrofauna mit der des oberen Teils des Lotkerns (s. Tab. 4) überein. d) Die unter b und C angefuührten Faunenwechsel werden auf langperiodische Klimaerwärmungen im skandinavischen Raum und den damit verbundenen Anstieg des Meeresspiegels zurückgeführt. e) Der Lotkern kann mit Hilfe von Untersuchungsergebnissen aus seiner näheren Umgebung (Bohuslän, Oslofjord) nur bedingt in ein stratigraphisches, durch Megafossilien belegtes Schema eingefügt werden, da er nach unten durch die Mikrofauna keine echte Begrenzung aufweist. Durch die Einwanderung mehrerer Foraminiferenarten mit boreal-lusitanischer Verbreitung in die Untersuchungsgebiete wird der Lotkern in die Isocardia-Absätze (Atlanticum-oberes Subboreal) eingegliedert. f) Aus einer Tabelle von PRATJE(1940) kann entnommen werden, daß dieser Zeitabschnitt nach DE GEER etwa um 5000 v.Chr. beginnt. Danach beträgt die geringste Sedimentation, die in dem Kerngebiet nach dieser Zeitrechnung möglich ist, bei einer Eindringtiefe des Lots von 10 m ungefähr 1,40 m pro Jahrtausend. Wahrscheinlich wird dieses Maß etwas größer sein.