Aristarchos RISE2: A Wide-Field Fast Imager for Exoplanet Transit Timing

The detection of exoplanets is currently of great topical interest in astronomy. The Rapid Imager for Surveys of Exoplanets 2 (RISE2) camera will be built for exoplanet studies and in particular for detection of transit timing variations (TTV) induced by the presence of a third body in the system. It will be identical to RISE which has been running successfully on the 2m Liverpool Telescope since 2008 but modified for the 2.3m ARISTARCHOS telescope. For TTV work the RISE/LT combination is regularly producing timings with accuracy <10 seconds making it the best suited instrument for this work. Furthermore, RISE2/AT has the added benefit of being located at a significantly different longitude to the LT/RISE on La Palma, hence extending the transit coverage.

Transit Observations of the Hot Jupiter HD 189733b at X-Ray Wavelengths

We present new X-ray observations obtained with Chandra ACIS-S of the HD 189733 system, consisting of a K-type star orbited by a transiting Hot Jupiter and an M-type stellar companion. We report a detection of the planetary transit in soft X-rays with a significantly deeper transit depth than observed in the optical. The X-ray data favor a transit depth of 6%-8%, versus a broadband optical transit depth of 2.41%. While we are able to exclude several possible stellar origins for this deep transit, additional observations will be necessary to fully exclude the possibility that coronal inhomogeneities influence the result. From the available data, we interpret the deep X-ray transit to be caused by a thin outer planetary atmosphere which is transparent at optical wavelengths, but dense enough to be opaque to X-rays. The X-ray radius appears to be larger than the radius observed at far-UV wavelengths, most likely due to high temperatures in the outer atmosphere at which hydrogen is mostly ionized. We furthermore detect the stellar companion HD 189733B in X-rays for the first time with an X-ray luminosity of log LX = 26.67 erg s-1. We show that the magnetic activity level of the companion is at odds with the activity level observed for the planet-hosting primary. The discrepancy may be caused by tidal interaction between the Hot Jupiter and its host star.

Analysis of RNA-seq data from the interaction of Coffea spp. - Colletotrichum kahawae

Tese de mestrado em Bioinformática e Biologia Computacional (Bioinformática), apresentada à Universidade de Lisboa, através da Faculdade de Ciências, 2014

Spatial distribution of plastic pollutants in a transit from Puget Sound to outside Nootka Sound Canada

Senior thesis written for Oceanography 445

An accessibility planning tool for network transit oriented development : SNAP

In the academic debate regarding the influences between urban form, built environment and travel patterns, a specific idea that has taken hold is that more compact urban development around railway stations, often referred to as Transit Oriented Development (TOD), contributes to the control of vehicle travel and to more sustainable metropolitan systems. According to this general principle this work proposes a GIS accessibility tool for the design of polycentric transit oriented scenario: SNAP - Station Network Accessibility Planning tool. In the first part the state of the art on Transit Oriented Development policies in Europe is presented with a focus on three study cases. In the second part the SNAP tool is described, with remarks to the approach, the methodology and the used indicators. Furthermore the paper discusses an application to the metropolitan area of Naples.

A Block Corridor

Main corridor in Mackenzie Chown A Block.

A minor theory of the transit of materiality into discourse, Via Campesina.

In this thesis I explore how the material properties of plant seed enter the political discourses of the international peasant coalition the Via Campesina and coalition member the National Fanners Union of Canada (NFU), querying how this process might be employed as a resource for a transformative eco-social politics. I employ several post-structural theoretical constructs, configuring them together as a "minor theory". This minor theory provides the basis for a "minor" reading of three sets of Via Campesina and NFU texts. The aim of these readings is to track the movement of seed from a local agricultural concern to a transitive political one, across both the material and discursive registers. In surfacing the presence of the seed's physical properties in the three texts, I highlight the distinctions between the constraining seed of corporate industrial agriculture, and the social and agroecological opportunities resulting from what I call a "Seed Event".

Personal soundtracks on public transit : personal listening devices and socio-spatial negotiations of students' bus journeys

One way of exploring the power of sound in the experience and constitution of space is through the phenomenon of personal listening devices (PLDs) in public environments. In this thesis, I draw from in-depth interviews with eleven Brock University students in S1. Catharines, Ontario, to show how PLDs (such as MP3 players like the iPod) are used to create personalized soundscapes and mediate their public transit journeys. I discuss how my interview participants experience the space-time of public transit, and show how PLDs are used to mediate these experiences in acoustic and non-acoustic ways. PLD use demonstrates that acoustic and environmental experiences are co-constitutive, which highlights a kinaesthetic quality of the transit-space. My empirical findings show that PLDs transform space, particularly by overlapping public and private appropriations of the bus. I use these empirical findings to discuss the PLD phenomenon in the theoretical context of spatiality, and more specifically, acoustic space. J develop the ontological notion of acoustic space, stating that space shares many of the properties of sound, and argue that sound is a rich epistemological tool for understanding and explaining our everyday experiences.

Models and algorithms for transit network planning.

Tesis (Doctor en Ingeniería con Especialidad en Ingeniería de Sistemas) UANL, 2012.

Développement d’outils pour l’analyse de données de ChIP-seq et l’identification des facteurs de transcription

La méthode ChIP-seq est une technologie combinant la technique de chromatine immunoprecipitation avec le séquençage haut-débit et permettant l’analyse in vivo des facteurs de transcription à grande échelle. Le traitement des grandes quantités de données ainsi générées nécessite des moyens informatiques performants et de nombreux outils ont vu le jour récemment. Reste cependant que cette multiplication des logiciels réalisant chacun une étape de l’analyse engendre des problèmes de compatibilité et complique les analyses. Il existe ainsi un besoin important pour une suite de logiciels performante et flexible permettant l’identification des motifs. Nous proposons ici un ensemble complet d’analyse de données ChIP-seq disponible librement dans R et composé de trois modules PICS, rGADEM et MotIV. A travers l’analyse de quatre jeux de données des facteurs de transcription CTCF, STAT1, FOXA1 et ER nous avons démontré l’efficacité de notre ensemble d’analyse et mis en avant les fonctionnalités novatrices de celui-ci, notamment concernant le traitement des résultats par MotIV conduisant à la découverte de motifs non détectés par les autres algorithmes.

Décliner la frontière : transit et contagion de la violence dans la fiction sacrificielle de Bernard-Marie Koltès

Ce mémoire de maîtrise traite de quatre pièces de l’auteur français Bernard-Marie Koltès. Résolument axé sur l’étude du texte écrit, il vise dans un premier temps l’analyse d’un ensemble de désajustements et d’une culture de l’équivoque dans le traitement du lieu, du temps et de l’identité. Le premier but de ces analyses est l’approfondissement de certaines avenues déjà investies par la critique (marginalité des lieux et des personnages, présence constante de la violence et de la mort, etc.), dans la recherche d’une signification globale à un ensemble de pratiques textuelles liées à la notion de limite ou de frontière. Opérant un changement de perspective, la seconde partie de l’étude s’attarde à la violence ainsi qu’aux modalités et implications de sa mise en texte dans une étude croisée de l’acte créateur et de la pratique de lecture. À partir de la théorie du sacrifice élaborée par René Girard dans La violence et le sacré, et faisant dialoguer certains textes importants d’auteurs divers (Aristote, Nietzsche, Artaud, Foucault, Derrida et Adorno), l’analyse vise à inscrire la littérarité du texte koltésien dans une entreprise plus vaste ayant à voir avec la violence, sa régulation et sa diffusion. Au carrefour des études théâtrales, de la littérature et de la philosophie, cette réflexion cherche à concevoir le théâtre de Koltès (particulièrement Roberto Zucco) comme un sacrifice rituel, afin de mieux en comprendre le rapport au réel et certaines de ses particularités du point de vue du mécanisme cathartique.

Assessing the impact of the Canadian tax credit for public transit passes.

Rapport de recherche présenté à la Faculté des arts et des sciences en vue de l'obtention du grade de Maîtrise en sciences économiques.