Use of a semantically grained database system for distribution and control within design environments

This paper presents a technique to share the data stored in an object-oriented database aimed at designing environments. This technique shares data between two related databases, called the Original and Product databases, and is composed of three processes: data separation, evolution and integration. Whenever a block of data needs to be shared, it is spread into both databases, resulting in a block on the original database, and another into the Product database, with special links between them controlled by the Object Manager. These blocks do not need to be maintained identical during the evolution phase of the sharing process. Six types of links were defined, and by choosing one, the designer control the evolution and reintegration of the block in both databases. This process uses the composite object concept as the unit of control. The presented concepts can be applied to any data model with support to composite objects.

Detecting Loci under Recent Positive Selection in Dairy and Beef Cattle by Combining Different Genome-Wide Scan Methods

As the methodologies available for the detection of positive selection from genomic data vary in terms of assumptions and execution, weak correlations are expected among them. However, if there is any given signal that is consistently supported across different methodologies, it is strong evidence that the locus has been under past selection. In this paper, a straightforward frequentist approach based on the Stouffer Method to combine P-values across different tests for evidence of recent positive selection in common variations, as well as strategies for extracting biological information from the detected signals, were described and applied to high density single nucleotide polymorphism (SNP) data generated from dairy and beef cattle (taurine and indicine). The ancestral Bovinae allele state of over 440,000 SNP is also reported. Using this combination of methods, highly significant (P<3.17×10-7) population-specific sweeps pointing out to candidate genes and pathways that may be involved in beef and dairy production were identified. The most significant signal was found in the Cornichon homolog 3 gene (CNIH3) in Brown Swiss (P = 3.82×10-12), and may be involved in the regulation of pre-ovulatory luteinizing hormone surge. Other putative pathways under selection are the glucolysis/gluconeogenesis, transcription machinery and chemokine/cytokine activity in Angus; calpain-calpastatin system and ribosome biogenesis in Brown Swiss; and gangliosides deposition in milk fat globules in Gyr. The composite method, combined with the strategies applied to retrieve functional information, may be a useful tool for surveying genome-wide selective sweeps and providing insights in to the source of selection.

Pangea - Arquitetura semântica para a integração de dados e modelos geoespaciais na Web

Coordenação de Aperfeiçoamento de Pessoal de Nível Superior (CAPES)

Espacialização do biovolume de plantas aquáticas submersas a partir da integração de dados obtidos por sensores remotos

Coordenação de Aperfeiçoamento de Pessoal de Nível Superior (CAPES)

Associação de polimorfismos de nucleotídeo único com características de crescimento e reprodutivas em bovinos Canchim

Pós-graduação em Genética e Melhoramento Animal - FCAV

Associação e seleção genômica para características relacionadas à eficiência reprodutiva de fêmeas da raça Nelore

Pós-graduação em Zootecnia - FCAV

Imageamento da porosidade através de perfis geofísicos de poço

O imageamento da porosidade é uma representação gráfica da distribuição lateral da porosidade da rocha, estimada a partir de dados de perfis geofísicos de poço. Apresenta-se aqui uma metodologia para produzir esta imagem geológica, totalmente independente da intervenção do intérprete, através de um algoritmo, dito, interpretativo baseado em dois tipos de redes neurais artificiais. A primeira parte do algoritmo baseia-se em uma rede neural com camada competitiva e é construído para realizar uma interpretação automática do clássico gráfico o P_b - Φ_N, produzindo um zoneamento do perfil e a estimativa da porosidade. A segunda parte baseia-se em uma rede neural com função de base radial, projetado para realizar uma integração espacial dos dados, a qual pode ser dividida em duas etapas. A primeira etapa refere-se à correlação de perfis de poço e a segunda à produção de uma estimativa da distribuição lateral da porosidade. Esta metodologia ajudará o intérprete na definição do modelo geológico do reservatório e, talvez o mais importante, o ajudará a desenvolver de um modo mais eficiente as estratégias para o desenvolvimento dos campos de óleo e gás. Os resultados ou as imagens da porosidade são bastante similares às seções geológicas convencionais, especialmente em um ambiente deposicional simples dominado por clásticos, onde um mapa de cores, escalonado em unidades de porosidade aparente para as argilas e efetiva para os arenitos, mostra a variação da porosidade e a disposição geométrica das camadas geológicas ao longo da seção. Esta metodologia é aplicada em dados reais da Formação Lagunillas, na Bacia do Lago Maracaibo, Venezuela.

Dinâmica evolutiva dos clusters de pequenos RNAs nucleares (RNAsn) nos cariótipos de espécies de gafanhotos com ênfase em Acrididae

Conselho Nacional de Desenvolvimento Científico e Tecnológico (CNPq)

Genome-Wide Association for Growth Traits in Canchim Beef Cattle

Conselho Nacional de Desenvolvimento Científico e Tecnológico (CNPq)

Caracterização do grau de impermeabilização relativa das vertentes de uma bacia hidrográfica urbanizada: o exemplo do Córrego da Servidão - Rio Claro (SP)

The expansion and growth of towns affect the hydrology of watersheds included in the urban environment, impacting mainly the slopes and river channels. This interference can be in soil waterproofing, the runoff of rainwater, the extinction of surface drainage, the dynamics of flooding processes, etc. For studies concerning the hydrological behavior of watersheds, Remote Sensing techniques have been used to support the acquisition and analysis of data and also to generate new information from the integration of these data. In this context, the study aimed to characterize scenarios and conduct comparative analysis of urban occupation of parts of watershed the Córrego da Servidão, in Rio Claro (SP) and analyze the degree of waterproofing on the ground. With the support of the soil categories of waterproofing listed in Soil Conservation Service (S.C.S / USDA) this analysis was conducted, considering the scenarios of 1958 and 2006, through processes of interpretative analysis of panchromatic and color images aerofotogramétricas. The analysis, data integration and mapping of the watershed area were conducted in an environment of a Geographic Information System (GIS). Maps were obtained to characterize land cover in the watershed, showing the evolution of urban occupation, as well as indicating the densely built and waterproofed

Modelo petrofísico 3D do Arenito Namorado no Campo de Namorado - Bacia de Campos, RJ

The Namorado Oil Field represents the beginning of the oil exploration in Brazil, in the 70s, and it is still a subject of researches because the importance of this turbidite sandstone in the brazilian oil production. The Namorado’s production level was denominated “Namorado sandstone”, it is composed by turbidite sandstone deposited during the Albian-Cenomanian. In order to define the structural geometry of the main reservoir, geological and geophysical tools like RECON and Geographix (Prizm – Seisvision) softwares were used, and its application was focused on geological facies analysis, for that propose well logs, seismic interpretation and petrophysical calculations were applied. Along this work 15 vertical wells were used and the facies reservoirs were mapped of along the oil field; it is important to mentioned that the all the facies were calibrated by the correlation rock vs log profile, and 12 reservoir-levels (NA-1, NA-2, NA-3, NA-4, NA-5, NA-6, NA-7, NA-8, NA-9, NA-10, NA-11 e NA-12) were recognized and interpreted. Stratigraphic sections (NE-SW and NW-SE) were also built based on stratigraphic well correlation of each interpreted level, and seismic interpretation (pseudo-3D seismic data) on the southeastern portion of the oil field. As results it was interpreted on two- and three-dimensional maps that the deposition reservoir’s levels are hight controlled by normal faults systems. This research also shows attribute maps interpretation and its relationship with the selection of the reservoir attribute represented on it. Finally the data integration of stratigraphic, geophysical and petrophysical calculations lets us the possibility of obtain a detail geological/petrophysical 3D model of the main reservoir levels of “Namorado sandstone” inside the oil/gás field

Mapeamento geológico no alvo Morro do Corcunda - Greenstone Belt Pilar de Goiás (Santa Terezinha-GO)

The following work refers to a geologic mapping in the Morro do Corcunda target, located between the cities of Pilar of Goiás and Santa Terezinha in the northwest portion of the State of Goiás. This mapping was carried through in 1:10,000 scale and covers an area of approximately 60km2. Collections of samples had been carried through for laborarorial analysis, and from those twenty-three thin scetions have been produced in order to describe the main lithologies that occur in the area. It was possible to observe anomalous gold targets in the region through chip samples carried through during the stage of field work. The gathered field data and the ones that have been made available by the company Yamana Gold Incorporation were congregated, and a data integration was carried through. This integration made possible the correlation of the litologies found in field with the Greenstone Belt Pilar de Goiás sequence and the structural evolution of the area.

Utilizações de informações genômicas para o melhoramento genético de características de crescimento em bovinos da raça Nelore

Pós-graduação em Genética e Melhoramento Animal - FCAV

Evidence of Bos javanicus x Bos indicus hybridization and major QTLs for birth weight in Indonesian Peranakan Ongole cattle

Fundação de Amparo à Pesquisa do Estado de São Paulo (FAPESP)

The genomes of two key bumblebee species with primitive eusocial organization

Fundação de Amparo à Pesquisa do Estado de São Paulo (FAPESP)