Soil organic carbon stocks in estuarine and marine mangrove ecosystems are driven by nutrient colimitation of P and N

Mangroves play an important role in carbon sequestration, but soil organic carbon (SOC) stocks differ between marine and estuarine mangroves, suggesting differing processes and drivers of SOC accumulation. Here, we compared undegraded and degraded marine and estuarine mangroves in a regional approach across the Indonesian archipelago for their SOC stocks and evaluated possible drivers imposed by nutrient limitations along the land-to-sea gradients. SOC stocks in natural marine mangroves (271–572 Mg ha-1 m-1 were much higher than under estuarine mangroves (100–315 Mg ha-1 m-1 with a further decrease caused by degradation to 80–132 Mg ha-1 m-1. Soils differed in C/N ratio (marine: 29–64; estuarine: 9–28), δ15N (marine: 0.6 to 0.7‰; estuarine: 2.5 to 7.2‰), and plant-available P (marine: 2.3–6.3 mg kg-1; estuarine: 0.16–1.8 mg kg-1). We found N and P supply of sea-oriented mangroves primarily met by dominating symbiotic N2 fixation from air and P import from sea, while mangroves on the landward gradient increasingly covered their demand in N and P from allochthonous sources and SOM recycling. Pioneer plants favored by degradation further increased nutrient recycling from soil resulting in smaller SOC stocks in the topsoil. These processes explained the differences in SOC stocks along the land-to-sea gradient in each mangrove type as well as the SOC stock differences observed between estuarine and marine mangrove ecosystems. This first large-scale evaluation of drivers of SOC stocks under mangroves thus suggests a continuum in mangrove functioning across scales and ecotypes and additionally provides viable proxies for carbon stock estimations in PES or REDD schemes.

A survey on diversity and distribution of crabs in inter tidal and sub tidal shore of the Sistan and Baloochestan Province (Oman sea)

This project was done for identifying and survey on distribution and diversity of true crabs in inter tidal and sub tidal zones of the Gulf of Oman (Sistan and Baluchistan province) during two year from 2009 to 2010. Specimens of inter tidal zones were carried out at 10 stations and 8 stations from sub tidal. The specimens were collected by hand and dip-net from inter tidal and by trawl net from sub tidal regions, preserved in 70% alcohol and carried to the laboratory. A total of 37 species belonged to 17 families from inter tidal and 23 species belonged to 9 families from sub tidal were identified. Of which 54 species were identified up to species level. 2 species from Matutidae, 1 species from Eriphiidae, Menippidae, Pseudoziidae, Plagusidae, Varunidae, Camptandriidae, Dromiidae and Dorippidae, 2 species from Oziidae, 3 species from Epialtidae, 2 species from Majidae, 4 species from Pilumnidae, 12 species from Portunidae, 6 species from Xanthidae, 2 species from Grapsidae, 3 species from Dotillidae, 3 species from Macrophthalmidae, 3 species from Ocypodidae, 3 species from Calappidae, 2 species from Parthenopidae and 1 species from Galenidae were identified. All specimens are deposited in the Zoological Museum, University of Tehran (ZUTC). The results of the present study revealed that family Portunidae with 6 species from inter tidal and 9 species from sub tidal regions have the highest species richness among the 22 families. Maximum similarity (Sorenson's Index) was obtained among the stations Breis, Lipar, Pozm and Gordim, and minimum was obtained among the stations Chazire-Kharchang with Pasabandar, Beris, Lipar, Daria-Bozorg, Pozm and Gordim in intertidal regions. In sub tidal regions maximum similarity (Sorenson's Index) was obtained among the stations Pasa bandar with Berisand minimum was obtained among the stations Govatr with Ramin and Gordim, Ramin with Pozm. Also maximum species richness was observed at Tiss in inter tidal and Chabahar in sub tidal stations, whereas minimum was obtained at Beris, Pozm, Gordim and Lipar in inter tidal and Govatr and Pozm in sub tidal stations. Family Ocypodidae in inter tidal and Portunidae in sub tidal regions have the highest distribution. In all of the species length and Breadth of carapace showed significant relation.

Effect of sea water level rise on sandy beach profile

Study of batch profile evolution and scouring effect due to the wave and current impacts in the coastal zone has been one of the most important issues in coastal engineering research projects during the past decades .to construct the coastal protective structures such piers, breakwaters and seawalls, it is necessary to estimate the scouring depth and bed level changes in the vicinity of such structures. Furthermore, the time - dependent changes in the equilibrium profile of the surf zone can be of great importance in designing coastal structures. Because of the importance of coastal engineering study in Iran due to the existence of two important coastal area located in the north and south parts of the country, and due to the lack of classified data in this respect (particularly the effect of sea level rise on coastal morphology) in the present study, based on the available data of Bandar Anzali region, an analysis of the coastal zone behavior is made. Bed level elevations are measured and compared with the theoretical equilibrium profile. It is shown that the behavior of the coastal zone in the region is consistent with the dean (equilibrium profile . In the next stage, following extensive investigations, the bed level changes due to a rise in sea level at different locations in the surf zone are estimated. Finally based on the results obtained for profile evolution due to sea level rise, the conclusion is made for design of coastal structures located in the study area. The results obtained from the present study indicate that the sea level rise can have a significant effect on beach profile and resulting erosion in the study area. The results are graphically presented with can be used for design purposes and establishing a data base for the coastal zone in the study region. It is believed that the present work can be regarded as a contribution to the existing knowledge of coast process in the study area and referred to as a basis for the future coastal research projects.

On the effect of Arabian Sea and Indian Ocean sea surface temperature anomaly on the monsoon rainfall of south-east of Iran

Southeast region of the country has hot and dry weather which causes to happen heavy rainfall in short time period of warm seasons and to occur river flooding. These precipitations are influenced by monsoon system of India ocean. In these thesis, It was tried to evaluate the relation between thermal anomaly of sea surface in India ocean and Arab sea which effects on southeast monsoon precipitations of Iran, For evaluation of this happening in southeast, data were collected from 7 synoptic observation stations of Bandar Abbas, Minab, Kerman , Bam, Chabahar, Iranshahr, Zahedan and 17 rain gauge stations during June to September of each year from 1980 to 2010. Rainy days were determine and then some information about synoptic circulation models, maps of average pressure of sea surface, geopotential height of 700hP surface, geopotential height of 500hP surface, temperature of 850 hPa surface, humidity of 700 hPa surface, vertical velocity of 700 hPa surface, vertical velocity of 500 hP and humidity of 2 meters height for 6 systems were extracted from NCEP/NCAR website for evaluation. By evaluation of these systems it was determined that the monsoon low pressure system tab brings needed humidity of these precipitations to this region from India ocean and Arab sea with a vast circulation. It is seen that warm air pool locates on Iran and cold air pool locates on west of India at 800 hPa surface. In a rainy day this warm air transfers to high latitudes and influences the temperature trough of southeast cold air pool of the country. In the middle surfaces of 700 and 500 hPa, the connection between low height system above India and low height system above the higher latitudes causes the low height system above India to be strength and developed. By evaluation of humidity at 2 meters height and 700 hPa surface we observe that humidity Increases in the southeast region. With penetrating of the low height system of India above the 700 and 500 hPa surfaces of southeast of Iran, the value of negative omega (Rising vertical velocity) is increased. In the second pace, it was shown the evaluation of how the correlation between sea surface temperature anomaly in India Ocean and Arab sea influences southeast monsoon precipitation of Iran. For this purpose the data of water surface temperature anomaly of Arab sea and India ocean, the data of precipitation anomaly of 7 synoptic stations , mentioned above, and correlation coefficient among the data of precipitation anomaly and water surface temperature anomaly of Arab Sea, east and west of India ocean were calculated. In conclusion it was shown that the maximum correlation coefficient of precipitation anomaly had belonged to India Ocean in June and no meaningful correlation was resulted in July among precipitation anomaly and sea surface temperature anomaly for three regions, which were evaluated.

Spójność multimodalnego przekazu reporterskiego w krótkiej relacji telewizyjnej "na żywo"

Wydział Neofilologii

Support vector machines to detect physiological patterns for EEG and EMG-based human-computer interaction:a review

Support Vector Machines (SVMs) are widely used classifiers for detecting physiological patterns in Human-Computer Interaction (HCI). Their success is due to their versatility, robustness and large availability of free dedicated toolboxes. Frequently in the literature, insufficient details about the SVM implementation and/or parameters selection are reported, making it impossible to reproduce study analysis and results. In order to perform an optimized classification and report a proper description of the results, it is necessary to have a comprehensive critical overview of the application of SVM. The aim of this paper is to provide a review of the usage of SVM in the determination of brain and muscle patterns for HCI, by focusing on electroencephalography (EEG) and electromyography (EMG) techniques. In particular, an overview of the basic principles of SVM theory is outlined, together with a description of several relevant literature implementations. Furthermore, details concerning reviewed papers are listed in tables, and statistics of SVM use in the literature are presented. Suitability of SVM for HCI is discussed and critical comparisons with other classifiers are reported.

Analysis and detection of partial discharges in an electric motor of a hybrid supercar.

The objective of this thesis was the development of a new detection method of partial discharge (PD) activity in the stator of an electrical hybrid supercar fed by a silicon carbide converter, for which detection with common methods make it very difficult to separate PD pulses from switching noise. This work focused on the analysis and detection of partial discharges making use of an antenna, a peak detector, and an oscilloscope capable of capturing the electromagnetic pulses emitted during PD activity. Validation of the proposed method was done by comparing the partial discharge inception voltage (PDIV) detected by this system with the one obtained from an optical method of proven accuracy, with different rise times and samples. Further development of this method, if proved successful on a full stator, can help increasing the overall reliability of the car, potentially allowing for real time detection of PD activity and predictive maintenance before failure of the insulation system in a hybrid vehicle.

A machine learning based method to detect genomic imbalances exploiting X chromosome exome reads

Whole Exome Sequencing (WES) is rapidly becoming the first-tier test in clinics, both thanks to its declining costs and the development of new platforms that help clinicians in the analysis and interpretation of SNV and InDels. However, we still know very little on how CNV detection could increase WES diagnostic yield. A plethora of exome CNV callers have been published over the years, all showing good performances towards specific CNV classes and sizes, suggesting that the combination of multiple tools is needed to obtain an overall good detection performance. Here we present TrainX, a ML-based method for calling heterozygous CNVs in WES data using EXCAVATOR2 Normalized Read Counts. We select males and females’ non pseudo-autosomal chromosome X alignments to construct our dataset and train our model, make predictions on autosomes target regions and use HMM to call CNVs. We compared TrainX against a set of CNV tools differing for the detection method (GATK4 gCNV, ExomeDepth, DECoN, CNVkit and EXCAVATOR2) and found that our algorithm outperformed them in terms of stability, as we identified both deletions and duplications with good scores (0.87 and 0.82 F1-scores respectively) and for sizes reaching the minimum resolution of 2 target regions. We also evaluated the method robustness using a set of WES and SNP array data (n=251), part of the Italian cohort of Epi25 collaborative, and were able to retrieve all clinical CNVs previously identified by the SNP array. TrainX showed good accuracy in detecting heterozygous CNVs of different sizes, making it a promising tool to use in a diagnostic setting.

Integrating structural variant calling, annotation and prioritization into whole genome analysis workflows: a practical application in the molecular diagnosis of neurodevelopmental disorders

Background: WGS is increasingly used as a first-line diagnostic test for patients with rare genetic diseases such as neurodevelopmental disorders (NDD). Clinical applications require a robust infrastructure to support processing, storage and analysis of WGS data. The identification and interpretation of SVs from WGS data also needs to be improved. Finally, there is a need for a prioritization system that enables downstream clinical analysis and facilitates data interpretation. Here, we present the results of a clinical application of WGS in a cohort of patients with NDD. Methods: We developed highly portable workflows for processing WGS data, including alignment, quality control, and variant calling of SNVs and SVs. A benchmark analysis of state-of-the-art SV detection tools was performed to select the most accurate combination for SV calling. A gene-based prioritization system was also implemented to support variant interpretation. Results: Using a benchmark analysis, we selected the most accurate combination of tools to improve SV detection from WGS data and build a dedicated pipeline. Our workflows were used to process WGS data from 77 NDD patient-parent families. The prioritization system supported downstream analysis and enabled molecular diagnosis in 32% of patients, 25% of which were SVs and suggested a potential diagnosis in 20% of patients, requiring further investigation to achieve diagnostic certainty. Conclusion: Our data suggest that the integration of SNVs and SVs is a main factor that increases diagnostic yield by WGS and show that the adoption of a dedicated pipeline improves the process of variant detection and interpretation.

Caratterizzazione e miglioramento del sistema isolante per macchine elettriche per autotrazione

La forte espansione del mercato della mobilità elettrica degli ultimi anni ha portato sotto i riflettori nuove esigenze, tecnologie e problematiche per il Power Train di questi veicoli. L’attenzione all’affidabilità del motore elettrico è ormai al pari di quella verso prestazioni, efficienza e costi. Al fine di garantire una vita utile al motore congrua con quella del veicolo, che si attesta tra mediamente tra i 5 e i 10 anni, è necessario conoscere attentamente quali sono le criticità del sistema isolante (EIS) della macchina. All’interno di questo ambito, questa tesi si è concentrata sull’analisi dei diversi componenti che costituiscono l’EIS dello statore di un motore elettrico impiegato in una super car ibrida. Il primo passo è stato caratterizzare i sottocomponenti dello statore, a partire dai fili (Litz Wires) con cui sono realizzati i suoi avvolgimenti. I tempi di endurance dei fili sotto attività di scarica parziale (PD) nell'ordine dei minuti hanno dimostrato la necessità di operare in assenza di scariche. Per questo motivo è stato studiato l'andamento del PDIV sotto diverse forme d'onda e per provini invecchiati termicamente. Lo studio è stato poi esteso allo statore completo, sottoponendo l’EIS a cicli di invecchiamento, al fine di diagnosticare, attraverso prove elettriche, se le sue prestazioni restano accettabili per l’interezza della vita prevista dall’applicazione. In conclusione, sono state trattate le problematiche della qualifica dell’EIS completo di un motore elettrico. È stata proposta una soluzione per realizzare un sistema idoneo a sottoporre lo statore da invecchiare a stress elettrico e termico contemporaneamente. Gli studi effettuati in merito hanno dimostrato la fattibilità ed i benefici di questo sistema, permettendo di rispecchiare al meglio le condizioni di servizio della macchina, con l’obiettivo di perfezionare le attuali procedure di qualifica.

Boosting microbial fuel cell performance by combining with an external supercapacitor

Microbial Fuel Cells (MFC) technology finds space as a promising technology as a green alternative power-generating device, by the possibility to convert organic matter directly into electricity by microbially catalysed reactions, especially for the potential of the simultaneous treatment of wastewaters. Despite the studies that were carried out over the decades, MFCs still provide insufficient power and current densities in order to be commercially attractive in the energy market. Scientific community today pursues two main strategies in order to increase the overall performance output of the MFC. The first is to support the cells with an external supercapacitor (SC), which is able to accept and deliver charge much faster than normal capacitors, thanks to the use of an electrostatic double-layer capacitance, in combination with pseudocapacitance. The second is to implement directly the SC into the MFC, by using carbon electrodes with high surface area, similar to the SC. Both strategies are eventually supported by the use of charge boosters, respect to the application of the MFC. Galvanostatic measures for the MFC and SCs are performed at different currents, alone and by integration of both devices. The SCs used have a capacitance respectively of 1F, 3F and 6F. Subsequently, a stack of MFCs is assembled and paired to a 3F SC, in order to power an ambient diffuser, able to spray at intervals with a can and a controller. In conclusion, the use of a SC in parallel to the MFCs increases the overall performance of the system. The SC remove the discharge current limit of the MFC and increases the energy and power delivered by the system, allowing it to power for a certain time the ambient diffuser successfully. The key factor highlighted by the final experiment was the insufficient charging time of the SC, resulting finally in a voltage that is inadequate to power the device. Further studies are therefore necessary to improve the performance of the MFCs.

Generazione efficiente di molteplici scenari di compromissione cyber ai fini di test e formazione

Questo lavoro si propone di implementare tre scenari di compromissione informatica tramite l'ausilio della strumentazione fornita da Ansible e Docker. Dopo una prima parte teorica di presentazione delle più recenti vulnerabilità/compromissioni informatiche, si passa all'illustrazione degli strumenti e dell'architettura degli scenari, anche tramite l'ausilio di codice. Tramite la funzione UNIX time si effettua l'analisi di diverse tecniche di distribuzione, dimostrando come l'automazione abbia effettivi e seri vantaggi rispetto ad una continua implementazione manuale, principalmente da un punto di vista temporale e computazionale.

Metodo innovativo per la misura delle scariche parziali sullo statore di un veicolo ibrido

L’affidabilità e la diagnostica sono tematiche che hanno sempre ricoperto un ruolo di fondamentale importanza in ambito elettrico. Il frenetico sviluppo che sta vivendo il settore della trazione elettrica dovuto alle restrizioni introdotte dall’UE sulle emissioni di CO2 ha ulteriormente incrementato la necessità di avere componenti sempre più performanti e affidabili. Questa tesi si concentra su una delle problematiche che interessano un motore elettrico: le scariche parziali. L’obiettivo di questo progetto è proporre un metodo innovativo per la rilevazione di scariche parziali che sfrutta le emissioni elettromagnetiche prodotte dalle scariche stesse. La novità rispetto ai tradizionali metodi è la possibilità di eseguire misure anche mentre il motore è in funzione. Il caso di riferimento è quello di un banco motore ma il metodo proposto, se correttamente validato potrà essere impiegato a bordo veicolo in un contesto di normale funzionamento. I principali dispositivi che compongono il sistema di misura presentato sono: un’antenna log-periodica con banda di lavoro 500MHz a 3GHz, un rilevatore di picco LTC5564 adatto per lavorare a radio frequenze ed un oscilloscopio USB. L’antenna rileva le onde elettromagnetiche prodotte dalle scariche parziali. Il rilevatore di picco, dispositivo la cui uscita è proporzionale all’ampiezza del segnale d’ingresso, fornisce un segnale con spettro in frequenza ridotto rispetto all’originale. L’ oscilloscopio digitale (Picoscope), più economico rispetto ai tradizionali oscilloscopi, consente infine l’acquisizione dei segnali. Le principali “tappe” dello sviluppo del nuovo sistema sono state: la caratterizzazione delle onde elettromagnetiche emesse dalle scariche parziali; il miglioramento del rapporto segnale/rumore; la programmazione di un’interfaccia utente.