Comments about some species abundance patterns: classic, neutral, and niche partitioning models

Conselho Nacional de Desenvolvimento Científico e Tecnológico (CNPq)

Niche occupancy and the relative role of micro-habitat and diet in resource partitioning among pond dwelling tadpoles.

We determined microhabitat and diet niche for tadpoles from two ponds in an agricultural landscape. Additionally, we verified the intraspecific variation in resource use, and if diet and microhabitat use were correlated. Tadpoles found in the two ponds differed in microhabitat use, because in the larger pond they explored deeper places far from the margin. There were three groups with high microhabitat niche overlap. In both ponds, plant cover was the best descriptor to explain interspecific variation in microhabitat use. Tadpoles of all species ingested mainly Bacillariophyceae and Trachellomonas however the diet differed intraspecifically in the species from the two ponds. Ten items in the temporary pond and 15 items in the permanent one were ingested by all species; however, the relative abundance of each item differed. Diet similarity was not correlated to similarity in microhabitat use. In this study, diet was as important as microhabitat use to explain resource partitioning.

Taxonomic diversity, niche width and similarity in the use of plant resources by bees (Hymenoptera: Anthophila) in a cerrado area

Fundação de Amparo à Pesquisa do Estado de São Paulo (FAPESP)

Niche-specific association of Aeromonas ribotypes from human and environmental origin

A total of 88 Aeromonas isolates from distinct locations and sources (39 from extraintestinal infections, 31 from diarrhoeic, ten from non-diarrhoeic faeces, all human, and eight from fresh water) were subjected to phenospecies identification, serotyping, ribotyping and detection of some virulence markers. The strains belonged to four different phenospecies marked by 19 O serogroups and 38 ribotypes. No strong correlation between these parameters was found, and no group, as defined by the typing methods, could be characterized with a particular set of virulence markers. There was a clear association of ribotypes with the source of the strains. Cluster analysis allowed the identification of a complex of ribotypes belonging to distinct but related sources, including clinical and environmental isolates. These results suggest that ribotyping may be an epidemiological tool suitable for the study of Aeromonas infections.

Boas práticas de fabricação (BPF) aplicadas nas etapas de beneficiamento de um packing house de laranjas: estudo de caso

Pós-graduação em Agronomia (Energia na Agricultura) - FCA

Diet and niche breadth and overlap in fish communities within the area affected by an Amazonian reservoir (Amapá, Brazil)

Nós investigamos a amplitude e a sobreposição de nicho de espécies de peixes que ocorrem em quatro ambientes afetados pelo reservatório Coaracy Nunes, no Estado brasileiro do Amapá. Amostras sazonais de peixes foram coletadas usando uma configuração padrão com malhadeiras, tarrafas, linhas e armadilhas. Quinhentos e quarenta conteúdos estomacais, representando 47 espécies de peixes, foram analisados e quantificados. Amplitude e sobreposição de nichos foram estimadas usando os índices de Levin e Pianka, respectivamente, enquanto a competição interespecífica foi avaliada usando (RA3) modelo nulo. ANOVA e o teste de Kruskal¬Wallis foram usados para avaliar, respectivamente, as diferenças de amplitude e sobreposição de nichos entre áreas. Os dados indicaram que a maioria das espécies de peixes pertence às guildas de psicívoros, onívoros e detritívoros. Estas espécies provavelmente colonizaram os ambientes devido à disponibilidade de adequados recursos alimentares e às favoráveis condições físicas criadas pelo represamento do rio. De maneira geral, poucas espécies têm nichos amplos, mas muitas delas são altamente especializadas. Variação sazonal de recursos tem pouco efeito no comportamento alimentar da maioria das espécies nas áreas de estudo. Os modelos nulos indicaram que competição não foi um fator determinante na estrutura da comunidade.

Two species of swimming crabs of the genus Achelous (Crustacea, Brachyura): environmental requirements determining the niche

Fundação de Amparo à Pesquisa do Estado de São Paulo (FAPESP)

The influence of niche and neutral processes on a neotropical anuran metacommunity

Fundação de Amparo à Pesquisa do Estado de São Paulo (FAPESP)

Do woody and herbaceous species compete for soil water across topographic gradients? Evidence for niche partitioning in a Neotropical savanna

Savannas are characterized by sparsely distributed woody species within a continuous herbaceous cover, composed mainly by grasses and small eudicot herbs. This vegetation structure is variable across the landscape, with shifts from open grassland to savanna woodland determined by factors that control tree density. These shifts often appear coupled with environmental variations, such as topographic gradients. Here we investigated whether herbaceous and woody savanna species differ in their use of soil water along a topographic gradient of about 110 m, spanning several vegetation physiognomies generally associated with Neotropical savannas. We measured the delta H-2 and delta O-18 signatures of plants, soils, groundwater and rainfall, determining the depth of plant water uptake and examining variations in water uptake patterns along the gradient. We found that woody species use water from deeper soil layers compared to herbaceous species, regardless of their position in the topographic gradient. However, the presence of a shallow water table restricted plant water uptake to the superficial soil layers at lower portions of the gradient. We confirmed that woody and herbaceous species are plastic with respect to their water use strategy, which determines niche partitioning across topographic gradients. Abiotic factors such as groundwater level, affect water uptake patterns independently of plant growth form, reinforcing vegetation gradients by exerting divergent selective pressures across topographic gradients. (C) 2013 SAAB. Published by Elsevier B.V. All rights reserved.

The community-level effect of light on germination timing in relation to seed mass: a source of regeneration niche differentiation

Within a community, species may germinate at different times so as to mitigate competition and to take advantage of different aspects of the seasonal environment (temporal niche differentiation). We illustrated a hypothesis of the combined effects of abiotic and biotic competitive factors on germination timing and the subsequent upscale effects on community assembly. We estimated the germination timing (GT) for 476 angiosperm species of the eastern Tibetan Plateau grasslands under two light treatments in the field: high (i.e. natural) light and low light. We also measured the shift in germination timing (SGT) across treatments for all species. Furthermore, we used phylogenetic comparative methods to test if GT and SGT were associated with seed mass, an important factor in competitive interactions. We found a significant positive correlation between GT and seed mass in both light treatments. Additionally, small seeds (early germinating seeds) tended to germinate later and large seeds (late germinating seeds) tended to germinate earlier under low light vs high light conditions. Low light availability can reduce temporal niche differentiation by increasing the overlap in germination time between small and large seeds. In turn, reduced temporal niche differentiation may increase competition in the process of community assembly.

Niche Specialization and Conservation Biology of Cicindela nevadica lincolniana

As with many organisms across the globe, Cicindela nevadica lincolniana is threatened with extinction. Understanding ecological factors that contribute to extinction vulnerability and what methods aid in the recovery of those species is essential in developing successful conservation programs. Here we examine behavioral mechanisms for niche partitioning along with improving techniques for captive rearing protocol and increasing public awareness about the conservation of this local insect. Ovipositional selectivity was examined for Cicindela nevadica lincolniana, Cicindela circumpicta, Cicindela togata, Cicindela punctulata, and Cicindela fulgida. Models reflect that these species of co-occurring tiger beetles select different ranges of salinity in which to oviposit thereby reducing the potential for interspecific competition. In a second study, thermoregulatory niche partitioning was examined for the same complex of tiger beetle species. Time spent in the sun, on different substrates, and engaging in various behaviors associated with thermoregulation were significantly different during different parts of the day and between species. I continued along a previous line of study to develop a viable captive rearing program. So far fourteen adult Cicindela nevadica lincolniana have been successfully reared in captivity. Overwintering mortality has been determined as a key factor in the mortality of this species in captivity. Finally, I examined the potential for using the visual arts to promote the conservation of Cicindela nevadica lincolniana and associated saline wetlands. The results from surveys conducted at the exhibit suggest that art exhibits can have a strong positive impact on members of the community.

An algorithm for the strip packing problem using collision free region and exact fitting placement

The irregular shape packing problem is approached. The container has a fixed width and an open dimension to be minimized. The proposed algorithm constructively creates the solution using an ordered list of items and a placement heuristic. Simulated annealing is the adopted metaheuristic to solve the optimization problem. A two-level algorithm is used to minimize the open dimension of the container. To ensure feasible layouts, the concept of collision free region is used. A collision free region represents all possible translations for an item to be placed and may be degenerated. For a moving item, the proposed placement heuristic detects the presence of exact fits (when the item is fully constrained by its surroundings) and exact slides (when the item position is constrained in all but one direction). The relevance of these positions is analyzed and a new placement heuristic is proposed. Computational comparisons on benchmark problems show that the proposed algorithm generated highly competitive solutions. Moreover, our algorithm updated some best known results. (C) 2012 Elsevier Ltd. All rights reserved.