Climate and infectious disease: Use of remote sensing for detection of Vibrio cholerae by indirect measurement

It has long been known that cholera outbreaks can be initiated when Vibrio cholerae, the bacterium that causes cholera, is present in drinking water in sufficient numbers to constitute an infective dose, if ingested by humans. Outbreaks associated with drinking or bathing in unpurified river or brackish water may directly or indirectly depend on such conditions as water temperature, nutrient concentration, and plankton production that may be favorable for growth and reproduction of the bacterium. Although these environmental parameters have routinely been measured by using water samples collected aboard research ships, the available data sets are sparse and infrequent. Furthermore, shipboard data acquisition is both expensive and time-consuming. Interpolation to regional scales can also be problematic. Although the bacterium, V. cholerae, cannot be sensed directly, remotely sensed data can be used to infer its presence. In the study reported here, satellite data were used to monitor the timing and spread of cholera. Public domain remote sensing data for the Bay of Bengal were compared directly with cholera case data collected in Bangladesh from 1992–1995. The remote sensing data included sea surface temperature and sea surface height. It was discovered that sea surface temperature shows an annual cycle similar to the cholera case data. Sea surface height may be an indicator of incursion of plankton-laden water inland, e.g., tidal rivers, because it was also found to be correlated with cholera outbreaks. The extensive studies accomplished during the past 25 years, confirming the hypothesis that V. cholerae is autochthonous to the aquatic environment and is a commensal of zooplankton, i.e., copepods, when combined with the findings of the satellite data analyses, provide strong evidence that cholera epidemics are climate-linked.

Análise da composição, abundância e distribuição da comunidade fitoplanctônica nos reservatórios do sistema em cascata do Médio e Baixo rio Tietê/SP

Com a finalidade de atender a demanda energética, muitos reservatórios foram construídos no Brasil e, notadamente na região Sudeste, as construções das barragens não somente atenderam aos usos múltiplos (geração de energia, irrigação, lazer e abastecimento público), como também foram elementos propulsores da economia regional, contribuindo para a expansão das atividades industriais e rurais, bem como, um desordenado crescimento urbano. Em conseqüência da falta de planejamento, áreas naturais foram desmatadas, sendo substituídas por formas de plantio inadequadas e por projetos de especulação imobiliária não condizentes com a sustentabilidade ambiental. No decorrer das últimas décadas, os impactos aumentaram em magnitude e extensão, ocasionando sérios problemas aos recursos hídricos, culminando em conflitos pelo uso da água. Dentro deste contexto, destaca-se o rio Tietê, o qual percorre importantes cidades e extensas áreas rurais no Estado de São Paulo, sendo que, neste longo percurso, recebe a contribuição de diversos tributários (poluídos ou não) e efluentes urbanos, industriais e aqueles derivados de fontes não pontuais, além do processo de fragmentação que foi instalado a partir da construção de inúmeras barragens. De forma conjunta, todos os fatores promoveram alterações significativas no sistema e, procurando avaliar a situação atual dos reservatórios, desenvolveu-se uma pesquisa direcionada à análise da composição, densidade e distribuição da comunidade fitoplanctônica e sua relação com as variáveis limnológicas, climatológicas e hidrodinâmicas dos reservatórios da Barra Bonita, Bariri, Ibitinga, Promissão, Nova Avanhandava, Três Irmãos, além dos rios Tietê e Piracicaba e parte do rio Paraná (reservatório de Jupiá e a Jusante do reservatório de Ilha Solteira). Para tanto, foram realizadas coletas nos meses de fevereiro, maio, julho e outubro de 2000 e os resultados obtidos demonstram uma elevada concentração de nutrientes, com redução na seqüência dos reservatórios, além da variabilidade temporal, com efeito significativo da precipitação no transporte de materiais, promovendo alterações no estado trófico de cada sistema. A disponibilidade de nutrientes, transparência da água, vazão e tempo de residência, associados aos fatores climatológicos, foram elementos importantes no estabelecimento das populações, influenciando a composição, densidade e distribuição da comunidade fitoplanctônica, a qual apresentou maior dominância das classes Cyanophyceae e Chlorophyceae, com maior contribuição em densidade e riqueza de espécies, respectivamente.

Estado nutricional de cultivares de cana-de-açúcar em função da aplicação de calcário e gesso no solo

As áreas destinadas à cultura de cana-de-açúcar estão concentradas em áreas de Cerrado, que são solos ácidos, com elevada saturação por alumínio e baixa saturação por bases. Para correção destas características, faz-se o uso de corretivos e fertilizantes no momento da implantação da cultura. Embora a toxidez por alumínio seja uma das mais sérias limitações ao crescimento de plantas em solos ácidos, há uma carência de estudos relacionando-a com a cultura de cana-de-açúcar. Com base nisto, o objeto deste trabalho foi avaliar o efeito da aplicação de calcário e gesso sobre o estado nutricional de quatro cultivares de cana-de-açúcar, distintas quanto à exigência nutricional, na fase de perfilhamento da cultura. Para tanto, desenvolveu-se experimento em casa de vegetação com vasos contendo 4 kg de amostra de solo, com saturação por alumínio de 29%, como substrato, com os seguintes tratamentos: 1) aplicação de calcário, 2) aplicação de gesso, e 3) controle, sem adição de calcário e gesso. Os cultivares utilizados foram: IACSP95-5000, IACSP94-2094, SP80-3280 e IAC95-3028. Após adição dos tratamentos, as amostras de solo foram incubadas por 45 dias. Para os materiais vegetais, mini-toletes de gema única das cultivares foram pré-brotados, crescidos por 90 dias e transplantados para os vasos, para os respectivos tratamentos. As plantas foram adubadas com macro e micronutrientes e cultivadas por 60 dias. Os tratamentos foram caracterizados quanto aos atributos químicos para avaliação da fertilidade após a incubação e após a coleta das plantas. Nas plantas, foram feitas avaliações de: clorofila, flavonoides, índice de balanço do nitrogênio (NBI), concentração de alumínio e dos nutrientes e produção de matéria seca de folha, colmo e raiz. Enquanto o tratamento gesso não diferiu do controle, o tratamento calcário foi efetivo para correção da reação da amostra de solo, com elevação dos valores de pH e saturação por bases, e redução da saturação por alumínio e acidez total, além do aumento nos teores de Ca e Mg. A adubação NPK+micro foi efetiva para aumentar os teores de P e K dos substratos de todos os tratamentos. Nas plantas, para todos os cultivares, os índices de clorofila, flavonoides e NBI foram mais adequados no tratamento calcário, em relação ao controle e ao gesso. A produção de matéria seca total e das partes das plantas, de modo geral, foi maior para a IACSP95-5000, intermediaria para a IACSP35-3028 e menor para a IACSP94-2094 e SP80-3280. Quanto aos tratamentos, não houve efeito do calcário e gesso sobre a produção de matéria seca de folha, contudo, houve aumento de produção de matéria seca de colmo e raiz pelo calcário, na cultivar IACSP95-5000. Independente do tratamento, as cultivares apresentaram concentração de alumínio superior a 5000 mg kg-1 nas raízes e inferiores a 360 e 160 mg kg-1 nas folhas e colmos, respectivamente, evidenciando que o Al foi acúmulo nas raízes das plantas. De modo geral, as concentrações de macro e micronutrientes variaram com os tratamentos e cultivares, porém sem valores altos e baixos extremos. Concluiu-se que a cultivar IACSP95-5000 tem maior potencial de produção em resposta à aplicação de calcário e que a saturação de alumínio de 29% não apresenta efeito negativo sobre a produção de matéria seca, exceto da cultivar IACSP95-5000, e estado nutricional das cultivares de cana-de-açúcar

Planktonic foraminifera of sediment trap samples

Biweekly sediment trap samples and concurrent hydrographic measurements collected between March 2005 and October 2008 from the Cariaco Basin, Venezuela, are used to assess the relationship between [CO3]2- and the area densities (ho A) of two species of planktonic foraminifera (Globigerinoides ruber (pink) and Globigerinoides sacculifer). Calcification temperatures were calculated for each sample using species-appropriate oxygen isotope (d18O) temperature equations that were then compared to monthly temperature profiles taken at the study site in order to determine calcification depth. Ambient [CO3]2- was determined for these calcification depths using alkalinity, pH, temperature, salinity, and nutrient concentration measurements taken during monthly hydrographic cruises. The rho A, which is representative of calcification efficiency, is determined by dividing individual foraminiferal shell weights (±0.43 µg) by their associated silhouette areas and taking the sample average. The results of this study show a strong correlation between rho A and ambient [CO3]2- for both G. ruber and G. sacculifer (R**2 = 0.89 and 0.86, respectively), confirming that [CO3]2- has a pronounced effect on the calcification of these species. Though the rho A for both species reveal a highly significant (p < 0.001) relationship with ambient [CO3]2-, linear regression reveals that the extent to which [CO3]2- influences foraminiferal calcification is species specific. Hierarchical regression analyses indicate that other environmental parameters (temperature and [PO4]3-) do not confound the use of G. ruber and G. sacculifer rho A as a predictor for [CO3]2-. This study suggests that G. ruber and G. sacculifer rho A can be used as reliable proxies for past surface ocean [CO3]2?-

(Table 2) Dinoflagellate cysts in surface sediment samples of METEOR cruises M20/2, M23/1, M34/2 and M34/2

The organic walled cyst content of 41 surface sediment samples from the south-eastern South Atlantic Ocean have been studied to create a dataset that can be used for palaeoceanographic reconstructions. In order to obtain insight into which environmental factors influence the distribution of individual cyst species, the cyst associations have been compared with oceanographic characteristics of the overlying water masses, i.e. temperature, salinity, density and stratification gradients. The associations and relationships have been established by visual examination of the dataset and the multivariate ordination techniques, Detrended Correspondence Analysis and Canonical Correspondence Analysis. Special attention has been given to the factors of transport and preservation of the cysts. Five associations have been recognised as being characteristic of (1) areas influenced by coastal upwelling and/or river outflow, (2) open ocean, (3) Agulhas Current and southern Benguela Current, (4) Benguela Current and (5) Walvis Bay, shelf break area. The factors dominant in influencing either directly or indirectly the cyst distributions appear to be the stratification in the upper 50 m of the water column, nutrient concentration and seasonality. Variations in sea surface temperatures and salinities have only minor effect on cyst distribution.

Modelling the effects of inflow parameters on lake water quality

A one-dimensional lake water quality model which includes water temperature, phytoplankton, phosphorus as phosphate, nitrogen as ammonia, nitrogen as nitrate and dissolved oxygen concentrations, previously calibrated for Lake Calhoun (USA) is applied to Uokiri Lake (Japan) for the year 1994. The model simulated phytoplankton and nutrient concentrations in the lake from July to November. Most of the water quality parameters are found to be the same as for Lake Calhoun. To predict probable lake water quality deterioration from algal blooming due to increased nutrient influx from river inflow, the model was run for several inflow water conditions. Effects of inflow nutrient concentration, inflow volume, inflow water temperatures are presented separately. The effect of each factor is considered in isolation although in reality more than one factor can change simultaneously. From the results it is clear that inflow nutrient concentration, inflow volume and inflow water temperature show very regular and reasonable impacts on lake water quality.

Diatom abundance in surface sediments of the northern North Pacific

In order to map the modern distribution of diatoms and to establish a reliable reference data set for paleoenvironmental reconstruction in the northern North Pacific, a new data set including the relative abundance of diatom species preserved in a total of 422 surface sediments was generated, which covers a broad range of environmental variables characteristic of the subarctic North Pacific, the Sea of Okhotsk and the Bering Sea between 30° and 70°N. The biogeographic distribution patterns as well as the preferences in sea surface temperature of 38 diatom species and species groups are documented. A Q-mode factor analysis yields a three-factor model representing assemblages associated with the Arctic, Subarctic and Subtropical water mass, indicating a close relationship between the diatom composition and the sea surface temperatures. The relative abundance pattern of 38 diatom species and species groups was statistically compared with nine environmental variables, i.e. the summer sea surface temperature and salinity, annual surface nutrient concentration (nitrate, phosphate, silicate), summer and winter mixed layer depth and summer and winter sea ice concentrations. Canonical Correspondence Analysis (CCA) indicates 32 species and species groups have strong correspondence with the pattern of summer sea surface temperature. In addition, the total diatom flux data compiled from ten sediment traps reveal that the seasonal signals preserved in the surface sediments are mostly from spring through autumn. This close relationship between diatom composition and the summer sea surface temperature will be useful in deriving a transfer function in the subarctic North Pacific for the quantitative paleoceanographic and paleoenvironmental studies. The relative abundance of the sea-ice indicator diatoms Fragilariopsis cylindrus and F. oceanica of >20% in the diatom composition is used to represent the winter sea ice edge in the Bering Sea. The northern boundary of the distribution of F. doliolus in the open ocean is suggested to be an indicator of the Subarctic Front, while the abundance of Chaetoceros resting spores may indicate iron input from nearby continents and shelves and induced productivity events in the study area.

(Table T1) Initial water quality conditions for bioassay experiments during Nathaniel B. Palmer cruise NBP09-01 in the Amundsen Sea

Nutrient addition experiments were performed during the austral summer in the Amundsen Sea (Southern Ocean) to investigate the availability of organically bound iron (Fe) to the phytoplankton communities, as well as assess their response to Fe amendment. Changes in autotrophic biomass, pigment concentration, maximum photochemical efficiency of photosystem II, and nutrient concentration were recorded in response to the addition of dissolved free Fe (DFe) and Fe bound to different model ligands. Analysis of pigment concentrations indicated that the autotrophic community was dominated by the prymnesiophyte Phaeocystis antarctica throughout most of the Amundsen Sea, although diatoms dominated in two experiments conducted in the marginal ice zone. Few significant differences in bulk community biomass (particulate organic carbon, nitrogen, and chlorophyll a) were observed, relative to the controls, in treatments with Fe added alone or bound to the ligand phytic acid. In contrast, when Fe was bound to the ligand desferrioxamine B (DFB), decreases in the bulk biomass indices were observed. The concentration of the diatom accessory pigment fucoxanthin showed little response to Fe additions, while the concentration of the P. antarctica-specific pigment, 19'-hexanoyloxyfucoxanthin (19'-hex), decreased when Fe was added alone or bound to the model ligands. Lastly, differences in the nitrate:phosphate (NO3- :PO4**3-) utilization ratio were observed between the Fe-amended treatments, with Fe bound to DFB resulting in the lowest NO3- :PO4**3- uptake ratios (~ 10) and the remaining Fe treatments having higher NO3- :PO4**3- uptake ratios (~ 17). The data are discussed with respect to glacial inputs of Fe in the Amundsen Sea and the bioavailability of Fe. We suggest that the previously observed high NO3- :PO4**3- utilization ratio of P. antarctica is a consequence of its production of dissolved organic matter that acts as ligands and increases the bioavailability of Fe, thereby stimulating the uptake of NO3-.

Seawater carbonate chemistry and growth rate during experiments with coral Acropora cervicornis, 2005

The growth rate of Acropora cervicornis branch tips maintained in the laboratory was measured before, during, and after exposure to elevated nitrate (5 and 10 µM NO3-), phosphate (2 and 4 µM P-PO43) and/or pCO2 (CO2 ~700 to 800 µatm). The effect of increased pCO2 was greater than that of nutrient enrichment alone. High concentrations of nitrate or phosphate resulted in significant decreases in growth rate, in both the presence and absence of increased pCO2. The effect of nitrate and phosphate enrichment combined was additive or antagonistic relative to nutrient concentration and pCO2 level. Growth rate recovery was greater after exposure to increased nutrients or CO2 compared to increased nutrients and CO2. If these results accurately predict coral response in the natural environment, it is reasonable to speculate that the survival and reef-building potential of this species will be significantly negatively impacted by continued coastal nutrification and projected pCO2 increases.

Distribution of diatoms, coccolithophores and planktic foraminifera in the Arabian Sea

The distribution of diatoms, coccolithophores and planktic foraminifers mirrored the hydrographic and trophic conditions of the surface ocean (0-100 m) across the upwelling area off the Oman coast to the central Arabian Sea during May/June 1997 and July/August 1995. The number of diatoms was increased in waters with local temperature minimum and enhanced nutrient concentration (nitrate, phosphate, silicate) caused by upwelling. Vegetative cells of Chaetoceros dominated the diatom assemblage in the coastal upwelling area. Towards the more nutrient depleted and stratified surface waters to the southeast, the number of diatoms decreased, coccolithophore and planktic foraminiferal numbers increased, and floral and faunal composition changed. In particular, the transition between the eutrophic upwelling region off Oman and the oligotrophic central Arabian Sea was marked by moderate nutrient concentration, and high coccolithophore and foraminifer numbers. Florisphaera profunda, previously often referred as a 'lower-photic-zone-species', was frequent in water depths as shallow as 20 m, and at high nutrient concentration up to 14 µmol NO3/l and 1.2 µmol PO4/. To the oligotrophic southeast of the divergence, cell densities of coccolithophores declined and Umbellosphaera irregularis prevailed throughout the water column down to 100 m depth. In general, total coccolithophore numbers were limited by nutrient threshold concentration, with low numbers (<10*10**3 cells/l) at high [NO3] and [PO4], and high numbers (>70*10**3 cells/l) at low [NO3] and [PO4]. The components of the complex microplankton succession, diatoms, coccoliths and planktic foraminifers (and possibly others), should ideally be used as a combined paleoceanographic proxy. Consequently, models on plankton ecology should be resolved at least for the seasonality, to account for the bias of paleoceanographic transfer calculations.

Bioremediation of piggery effluents using Scenedesmus Obliquus microalga [Resumo]

Effluents from intensive pig farms present high nutrient concentration, mainly ammonium, contributing to water eutrophication and pollution. Microalgae ability to deplete inorganic nutrients makes them an efficient effluent bioremediation tool. Scenedesmus obliquus was grown in piggery effluent (without any pretreatment) diluted with tap water at 5%v/v (187±25mg/L N-NH4+) and compared with growth in synthetic Bristol media. A 21-days trial was performed in 1L bubble-column reactors illuminated by fluorescent and LED lamps(3klux). Microalgae growth was monitored through OD540nm, dry weight and Chlorophyll content and also by flow cytometry in terms of autofluorescence read in FL3 channel (>670 nm), cell size (FSC), internal complexity (SSC) and cell membrane integrity (PI). S. obliquus cells have grown slower in pig effluent (mmax=0.13-19d-1) than in Bristol media (mmax=0.46-0.50d-1) although after 15 days the biomass productivity observed for the pig waste cultivation, operated under LED (0.127gL-1d-1) was similar to those attained for the Bristol media after 8 and 12 days (0.130 and 0.129 gL-1d-1 using Fluorescent and LED lights, respectively). The Chlorophyll content was correlated to FL3 autofluorescence, with R2>0.97 for Bristol and R2>0.92 for pig waste cultures. Regarding cell size and complexity, Bristol cultures did not show significant differences along time, while cells grown on pig waste increased, attaining FSC and SSC values similar to those observed for Bristol cultures. However, pig waste led to higher percentage of cells with permeabilised membrane (up to 18%) than Bristol cultures (7%). For pig waste experiments, ammonium removal rates were 95% with final values within legal limits. S. obliquus cultivations proved to be an efficient system for direct piggery effluent bioremediation, attaining biomass productivities similar to those obtained in synthetic media. Using LED lighting enables to reduce the energy consumption while maintaining microalgae growth and bioremediation performance. Scale-up to an outdoor 150L photobioreactor is underway.

CRESCIMENTO INICIAL DE ACÁCIA-NEGRA COM VERMICOMPOSTOS DE DIFERENTES RESÍDUOS AGROINDUSTRIAIS

A utilização de vermicompostos de diferentes resíduos agroindustriais na produção de mudas de acácianegra pode ser uma alternativa de reutilização de resíduos e aumentar a produção de mudas. Assim, os objetivos deste trabalho foram avaliar o crescimento e a concentração de nutrientes em mudas de acácianegra, cultivadas em substratos com diferentes vermicompostos de resíduos orgânicos agroindustriais. Instalou-se em casa de vegetação 11 diferentes tratamentos: T1) vermicomposto de esterco bovino (EB); T2) vermicomposto de esterco ovino (EO); T3) vermicomposto de lodo de parbolização de arroz (LP); T4) tratamento controle (sem adubação); T5) tratamento controle com adução mineral (NPK); T6) mistura de EB e LP; T7) mistura de EO e LP; T8) mistura de EB e vermicomposto de resíduos de alimentos (RA); T9) mistura de EO e RA; T10) mistura de EB e vermicomposto de resíduos de frutas (RF); T11) mistura de EO e RF. Após 180 dias de cultivo em recipiente com capacidade de cinco litros, foram analisadas a massa seca e a concentração de nutrientes na parte aérea da acácia-negra, e a concentração de nutrientes no solo, após o cultivo. A adição do esterco bovino, bem como a mistura de esterco bovino e resíduos alimentícios favoreceram o incremento de matéria seca das plantas de acácia-negra. Os resultados mostraram que as concentrações de nutrientes nas plantas, com exceção de Fe e Mn, variaram com adição de vermicompostos no solo. Os tratamentos T3 e T6 elevaram as concentrações em P, N, Zn de Cu nas folhas de acácia-negra. Além disso, a adição dos vermicompostos ao solo aumentou a disponibilidade de nutrientes para as plantas, mesmo após o cultivo, especialmente com relação ao fósforo, potássio e magnésio, sendo uma alternativa viável e eficaz na produção de mudas, podendo substituir a utilização de adubação mineral.

CRESCIMENTO INICIAL E CONCENTRAÇÃO DE NUTRIENTES EM CLONES DE Eucalyptus urophylla x Eucalyptus grandis SOB INTERFERÊNCIA DE PLANTAS DANINHAS

A presença de plantas daninhas em plantios de eucalipto, especialmente nos dois primeiros anos, pode acarretar grandes prejuízos à produtividade, pois reduz a eficiência de aproveitamento dos recursos de crescimento pela cultura. Assim, objetivou-se com este trabalho avaliar os efeitos da interferência de plantas daninhas sobre o crescimento inicial de dois clones de Eucalyptus urophylla x Eucalyptus grandis e a concentração foliar de nutrientes na cultura e nas plantas daninhas. O experimento foi instalado em esquema fatorial 2 x 5 + 7, sendo dois clones de híbridos de Eucalyptus urophylla x Eucalyptus grandis, identificados como CNB001 e CNB016, em competição com cinco plantas daninhas Urochloa decumbens (capim-braquiária), Ipomoea nil (corda-de-viola), Commelina diffusa (trapoeraba), Spermacoce latifolia (erva-quente) e Panicum maximum (capim-colonião). Adicionalmente, foram cultivados os dois clones de eucalipto e as cinco plantas daninhas em monocultivo como padrão de comparação, no delineamento inteiramente casualizado, com quatro repetições. Foram avaliados eucalipto através da altura de plantas, o diâmetro do coleto, o número de ramos, a área foliar, a matéria seca e, o teor foliar de nutrientes do eucalipto, bem como o teor de nutrientes nas folhas das plantas daninhas. O clone CNB001 apresentou crescimento inicial superior ao clone CNB016, no entanto, livre da interferência de plantas daninhas, verificaram-se teores foliares semelhantes para a maioria dos nutrientes em ambos os genótipos. O clone CNB016 mostrou maior sensibilidade à interferência negativa das plantas daninhas que o clone CNB001, sendo seu crescimento inicial mais afetado por Ipomoea nil e a concentração de nutrientes reduzida pelas espécies Panicum maximum, Urochloa decumbens e Commelina diffusa. Panicum maximum apresentou maior interferência com o clone CNB001, enquanto Ipomoea nil pouco influenciou o crescimento e o teor de nutrientes deste híbrido. As plantas daninhas apresentaram elevada capacidade de extrair nutrientes do solo, mesmo em convivência com os clones de Eucalyptus urophylla x Eucalyptus grandis. A interferência imposta à cultura é dependente da espécie infestante e do genótipo de eucalipto.