人猿超科和旧大陆猴7种高等灵长类FKN全基因序列的测定及进化分析

测定人猿超科(人、黑猩猩、大猩猩、红毛猩猩和长臂猿)和旧大陆猴(猕猴和叶猴)7种高等灵长类FKN全基因序列,探讨其系统进化分析.用简并引物PCR(Degenerated PCR)法分别扩增FKN的3个外显子,其产物经琼脂糖凝胶回收、纯化后测序,然后用BioEdit软件剪切拼接FKN基因全序列,用DNAStar比对后比较基因和氨基酸序列同源性,Mega软件重构FKN基因进化树,应用Datamonkey分析FKN的负选择位点.序列分析发现人猿超科较旧大陆猴FKN基因除了有散在的点突变外,还有一明显的30 bp的核苷酸缺失突变;人FKN基因序列与黑猩猩、大猩猩、红毛猩猩、长臂猿、猕猴和叶猴的同源性分别是99.2%、98.4%、98.1%、96.5%%、95.95和93.8%,由此推导的氨基酸序列同源性分别是98.5%、98.0%、97.7%、94.7%、93.7%和90.5%;FKN基因进化树表明人与黑猩猩关系更近,FKN基因进化和通常认为的物种进化一致;Datamonkey分析结果显示FKN存在3个负选择位点53Q.84D、239N.成功获得人、黑猩猩、大猩猩、红毛猩猩、长臂猿、猕猴和叶猴7种高等灵长类物种FKN全基因序列,为后续探讨FKN在高等灵长类物种进化过程中免疫学功能演变及其结构与功能的关系奠定基础. 作 者： 洪晓武 张亚平 储以微 高海峰 蒋正刚 熊思东 HONG Xiao-Wu ZHANG Ya-Ping CHU Yi-Wei GAO Hai-Feng JIANG Zheng-Gang XIONG Si-Dong 作者单位： 洪晓武,储以微,高海峰,蒋正刚,熊思东,HONG Xiao-Wu,CHU Yi-Wei,GAO Hai-Feng,JIANG Zheng-Gang,XIONG Si-Dong(复旦大学上海医学院免疫学系,免疫生物学研究所,上海,200032) 张亚平,ZHANG Ya-Ping(中国科学院昆明动物研究所细胞与分子进化开放实验室,昆明,650223) 刊 名： 遗传 ISTIC PKU 英文刊名： HEREDITAS 年，卷(期)： 2008 30(5) 分类号： Q94 关键词： 人猿超科 旧大陆猴 FKN 测序 进化分析 机标分类号： R5 S86 机标关键词： 大陆灵长类全基因序列测定系统进化分析phylogenetic analysis基因进化树黑猩猩序列同源性长臂猿物种进化猕猴红毛负选择氨基酸琼脂糖凝胶基因全序列序列分析位点软件重构 基金项目： 国家自然科学基金，复旦大学校科研和教改项目 DOI：

DNA拓扑异构酶Ⅱ与ⅠA的进化分析

DNA拓扑异构酶与断开DNA链和改变其拓扑结构有关。先前的研究认为,拓扑异构酶TypeⅡB是由TypeⅡA通过基因的复制、重组和缺失所造成。然而,本研究结果则显示,TypeⅠA与TypeⅡB的进化关系较近,而TypeⅡA与TypeⅡB的关系较远。因此,TypeⅡB可能是由TypeⅠA演化而来,或者说,TypeⅡB是TypeⅠA在古细菌中的特化形式;TypeⅡB可能是由TypeⅡA通过形成TypeⅠA后演化而成的,而不是由TypeⅡA直接通过基因的复制、重组和缺失所造成。在由TypeⅡA演化成为TypeⅠA,最后演化为TypeⅡB的过程中,DNA拓扑异构酶的催化机制也发生了变化从需要金属离子的协助,演化到了不需要镁离子的存在协助其催化。

从基于结构定义的序列模体识别蛋白质的超家族

以进化上相距较远的蛋白质酷氨酸磷酸酶I和II为例，通过结构比较和基于结构的序列比对及共同保守区域残基替换模式的分析，定义了基于结构的序列模体。利用这种新的模体对SWISS-PROT和TrEMBL蛋白质序列库进行搜索，可特异性地同时识别磷酸酶I和II，其识别正确率可达98.4%。而在此之前，尚未见可同时识别磷酸酶I和II序列模体的报道。

Effects of dietary vitamin E on the growth and breeding performance of Ompok pabda

A 90 day feeding trail was conducted to investigate the effect of vitamin E on the growth and breeding performance of Ompok pabda. A total of 84 healthy female brood fish (41.10±0.44g) were divided into 4 treatments i.e. treatment T1 T2, T3 and T4 having three replications each. The fish were fed twice a day with a standard feed (40% protein) having 4 doses of vitamin E viz. 0 (served as control), 50, 100 and 150mg vitamin E/kg feed. At the end of the feeding trial, the brood fish were induced to breed with PG extract to observe the effect of vitamin Eon feed. After rearing for 90 days with the experimental feeds, it was found that weight gain and specific growth rate of brood fish fed with 100mg vitamin E/kg feed (treatment T3) was the highest (14.78±0.38g and 2.99±0.11) while 150mg vitamin E/kg feed (treatment T4) fed fish gave the poorest result (2.97±0.89g and 1.21±0.32). There was no significant difference in terms of length gain of brood fish among the different treatments. The brood fish were induced to breed with equal dose of PG extract (18 and 12mg PG/kg body weight for female and male respectively) to observe the dietary effect of vitamin E on breeding performance. The highest ovulation, fertilization and hatching rate of eggs were found to be 81.48±6.41%, 84.04±3.53% and 68.59±5.03% respectively in the brood fish of treatment T1 while the poorest (33.33±00%, 52.35±5.02% and 45.70±7.24% respectively) were found in the brood fish under treatment T4. The results suggest that inclusion of 100mg vitamin E/kg feed is best for enhancing the breeding performance of O. pabda brood fish indicating that vitamin E content has a positive impact on reproduction of fish. The present results also imply that inclusion of higher level of vitamin E exerts an antagonistic effect in terms of growth and breeding performance of this species.

绵羊大肠阻塞病理模型血浆及组织中内皮素-1含量的变化

选择绵羊建立反刍动物大肠阻塞病理模型,对手术前、后静脉血浆及死亡后心脏、肝脏、脾脏、肺脏、肾脏、胰脏和肠组织中内皮素-1(ET-1)含量进行测定,探讨了该模型血浆及组织中ET-1含量的变化和临床意义。结果表明:模型组和对照组手术前血浆ET-1含量分别为(57.81±2.95)ng/L和(62.72±3.17)ng/L,手术后含量分别为(41.87±8.06)ng/L和(60.74±4.68)ng/L,模型组术后ET--1含量明显下降(P<0.05);每30min间隔采血,模型组术前、术后第2天和第4天ET--1含量依次降低,差异极显著(P<0.01);模型组心、肺、肾组织中的ET-1含量分别为(273.28±53.7)、(270.65±98.6)、(249.32±20.8)ng/L,分别比对照组心脏(105.73±32.2)ng/L、肺脏((34.34±6.73)ng/L、肾脏(50.43±12.89)ng/L明显升高(P<0.01)。这些变化可能与肠阻塞的发生、发展有密切关系。

黑藻对水体和沉积物理化性质的改善和营养元素的去除作用

通过人工模拟实验,研究了不同种植密度(50、100和150株/m2)的黑藻(Hydrilla verticillata)对富营养湖泊水体和沉积物理化性质的改善和营养元素的去除作用。结果表明:种植黑藻能显著提高水体溶解氧(DO)和沉积物的氧化还原电位(Eh),DO由3.95mg/L提高到10.42mg/L;沉积物Eh提高了58.6—109.4mV。黑藻的生长有效地降低了水体和沉积物中的氮、磷含量,水体中TP降低了38.9%—57.1%;NH4+-N的含量降低了90.2%;沉积物中TN的含量比试验前中期降低了

淡水噬藻体及其他溶藻因子的分布与感染力

研究了不同时空条件下噬藻体的分布与效力的变化.2001年8~11月共采集了18个水样,对14种藻进行直接感染,从其中的5个水样中分离到了噬藻体(蓝藻病毒),它们主要来源于降温以前富营养化池塘的水样,同时分离得到了4株溶藻细菌.在接受直接感染的14种藻中,聚球藻、组囊藻、微囊藻、织线藻、鱼腥藻7120、衣藻及小球藻为敏感种类,而螺旋藻、念珠藻、鞘丝藻、颤藻、鱼腥藻595、鱼腥藻1444、栅藻则为不敏感种类,敏感种类中织线藻受到噬藻体的感染,聚球藻、微囊藻和织线藻受到溶藻细菌的溶解.从富营养化的池塘采集的水样

尼卡地平血药浓度测定及其人体药代动力学

目的　建立人血浆中尼卡地平 (Nic)浓度测定的毛细管柱气相色谱法 ,并以此法研究健康受试者 poNic缓释胶囊后的药代动力学。方法　样品经甲苯提取 ,过无水硫酸钠小柱后 ,用HP 12 5m× 0 32mmID毛细管柱分离 ,采用无分流进样方式 ,以巴尼地平作为内标 ,63 Ni电子捕获检测器检测。结果　该法在 0 5～ 10 0ng·mL-1浓度范围内呈线性关系 ,最低定量浓度为 0 5ng·mL-1,日内、日间RSD分别小于 4%和 7% ,低、中、高浓度 (0 5 ,10 ,5 0ng·mL-1)

Autonomous rigid body attitude synchronization

Control laws to synchronize attitudes in a swarm of fully actuated rigid bodies, in the absence of a common reference attitude or hierarchy in the swarm, are proposed in [Smith, T. R., Hanssmann, H., & Leonard, N.E. (2001). Orientation control of multiple underwater vehicles with symmetry-breaking potentials. In Proc. 40th IEEE conf. decision and control (pp. 4598-4603); Nair, S., Leonard, N. E. (2007). Stable synchronization of rigid body networks. Networks and Heterogeneous Media, 2(4), 595-624]. The present paper studies two separate extensions with the same energy shaping approach: (i) locally synchronizing the rigid bodies' attitudes, but without restricting their final motion and (ii) relaxing the communication topology from undirected, fixed and connected to directed, varying and uniformly connected. The specific strategies that must be developed for these extensions illustrate the limitations of attitude control with reduced information. © 2008 Elsevier Ltd.

Resonant excitation and imaging of nonequilibrium exciton spins in single core-shell GaAs-AlGaAs nanowires.

Nonequilibrium spin distributions in single GaAs/AlGaAs core-shell nanowires are excited using resonant polarized excitation at 10 K. At all excitation energies, we observe strong photoluminescence polarization due to suppressed radiative recombination of excitons with dipoles aligned perpendicular to the nanowire. Excitation resonances are observed at 1- or 2-LO phonon energies above the exciton ground states. Using rate equation modeling, we show that, at the lowest energies, strongly nonequilibrium spin distributions are present and we estimate their spin relaxation rate.