Variation in habitat choice and delayed reproduction: Adaptive queuing strategies or individual quality differences?

In most species, some individuals delay reproduction or occupy inferior breeding positions. The queue hypothesis tries to explain both patterns by proposing that individuals strategically delay breeding (queue) to acquire better breeding or social positions. In 1995, Ens, Weissing, and Drent addressed evolutionarily stable queuing strategies in situations with habitat heterogeneity. However, their model did not consider the non - mutually exclusive individual quality hypothesis, which suggests that some individuals delay breeding or occupy inferior breeding positions because they are poor competitors. Here we extend their model with individual differences in competitive abilities, which are probably plentiful in nature. We show that including even the smallest competitive asymmetries will result in individuals using queuing strategies completely different from those in models that assume equal competitors. Subsequently, we investigate how well our models can explain settlement patterns in the wild, using a long-term study on oystercatchers. This long-lived shorebird exhibits strong variation in age of first reproduction and territory quality. We show that only models that include competitive asymmetries can explain why oystercatchers' settlement patterns depend on natal origin. We conclude that predictions from queuing models are very sensitive to assumptions about competitive asymmetries, while detecting such differences in the wild is often problematic.

Habitat Choice and Female Preference in a Polymorphic Stickleback Population

Background: A small pond, c. 90 years old, near Bern, Switzerland contains a population of threespine stickleback (Gasterosteus aculeatus) with two distinct male phenotypes. Males of one type are large, and red, and nest in the shallow littoral zone. The males of the other are small and orange, and nest offshore at slightly greater depth. The females in this population are phenotypically highly variable but cannot easily be assigned to either male type. Question: Is the existence of two sympatric male morphs maintained by substrate-associated male nest site choice and facilitated by female mate preferences? Organisms: Male stickleback caught individually at their breeding sites. Females caught with minnow traps. Methods: In experimental tanks, we simulated the slope and substrate of the two nesting habitats. We then placed individual males in a tank and observed in which habitat the male would build his nest. In a simultaneous two-stimulus choice design, we gave females the choice between a large, red male and a small, orange one. We measured female morphology and used linear mixed effect models to determine whether female preference correlated with female morphology. Results: Both red and orange males preferred nesting in the habitat that simulated the slightly deeper offshore condition. This is the habitat occupied by the small, orange males in the pond itself. The proportion of females that chose a small orange male was similar to that which chose a large red male. Several aspects of female phenotype correlated with the male type that a female preferred.

Turning Passive Detection Systems into Field Experiments: An Application Using Wetland Fishes and Enclosures to Track Fine-Scale Movement and Habitat Choice

Understanding habitat selection and movement remains a key question in behavioral ecology. Yet, obtaining a sufficiently high spatiotemporal resolution of the movement paths of organisms remains a major challenge, despite recent technological advances. Observing fine-scale movement and habitat choice decisions in the field can prove to be difficult and expensive, particularly in expansive habitats such as wetlands. We describe the application of passive integrated transponder (PIT) systems to field enclosures for tracking detailed fish behaviors in an experimental setting. PIT systems have been applied to habitats with clear passageways, at fixed locations or in controlled laboratory and mesocosm settings, but their use in unconfined habitats and field-based experimental setups remains limited. In an Everglades enclosure, we continuously tracked the movement and habitat use of PIT-tagged centrarchids across three habitats of varying depth and complexity using multiple flatbed antennas for 14 days. Fish used all three habitats, with marked species-specific diel movement patterns across habitats, and short-lived movements that would be likely missed by other tracking techniques. Findings suggest that the application of PIT systems to field enclosures can be an insightful approach for gaining continuous, undisturbed and detailed movement data in unconfined habitats, and for experimentally manipulating both internal and external drivers of these behaviors.

Interaction between breeding habitat and elevation affects prevalence but not infection intensity of Batrachochytrium dendrobatidis in Brazilian anuran assemblages

Conselho Nacional de Desenvolvimento Científico e Tecnológico (CNPq)

The bullhead Cottus gobio , a versatile and successful fish

A series of studies on the ecology of the bullhead, Cottus gobio is described. Habitat choice, growth rate and longevity, population density, biomass and production, reproduction, life history and feeding is compared at 8 sites in England and 1 site in Wales. Evidence suggests that in Cottus gobio the prevailing environmental conditions result in considerable modifications in longevity, growth rate and egg production. It also indicates that the advantages of fast growth and high reproductive effort in favourable habitats are offset, at least partially by increases in mortality.

Distribuição das assembleias de girinos associadas a riachos da Reserva Ecológica de Guapiaçu, Cachoeiras de Macacú, Rio de Janeiro, Brasil

Os girinos são organismos diversos e abundantes nos pequenos riachos de cabeceira de florestas tropicais e constituem importantes componentes da diversidade biológica, da trófica e funcional dos sistemas aquáticos. Diferentes características estruturais e limnológicas dos ambientes aquáticos influenciam a organização das assembleias de girinos. Embora o estágio larvar dos anuros seja o mais vulnerável de seu ciclo de vida, sujeito a elevadas taxas de mortalidade, as pesquisas sobre girinos na região neotropical ainda são pouco representativas diante da elevada diversidade de anfíbios desta região e ferramentas que permitam a sua identificação ainda são escassas. Nesta tese, dividida em três capítulos, apresento uma compilação das informações relacionadas aos principais fatores que afetam as assembleias de girinos na região tropical (Capítulo 1), a caracterização morfológica dos girinos encontrados nos riachos durante o estudo e uma proposta de chave dicotômica de identificação (Capítulo 2) e avalio a importância relativa da posição geográfica e da variação temporal de fatores ambientais locais sobre as assembleias de girinos, assim como a correlação entre as espécies de girinos e as variáveis ambientais de 10 riachos, ao longo de 15 meses, nas florestas da REGUA (Capítulo 3). Há pelo menos oito tendências relacionadas à distribuição das assembleias de girinos: (1) o tamanho dos riachos e a diversidade de microhabitats são importantes características abióticas influenciando a riqueza e a composição de espécies; (2) em poças, o gradiente de permanência (e.g., hidroperíodo) e a heterogeneidade do habitat são os principais fatores moldando as assembleias de girinos; (3) a composição de espécies parece ser um parâmetro das assembleias mais relevante do que a riqueza de espécies e deve ser primeiramente considerado durante o planejamento de ações conservacionistas de anuros associados a poças e riachos; (4) a predação parece ser a interação biótica mais importante na estruturação das assembleias de girinos, com predadores vertebrados (e.g. peixes) sendo mais vorazes em habitats permanentes e predadores invertebrados (e.g. larvas de odonata) sendo mais vorazes em ambientes temporários; (5) os girinos podem exercer um efeito regulatório, predando ovos e girinos recém eclodidos; (6) o uso do microhabitat varia em função da escolha do habitat reprodutivo pelos adultos, presença de predadores, filogenia, estágio de desenvolvimento e heterogeneidade do habitat; (7) os fatores históricos restringem os habitats reprodutivos que uma espécie utiliza, impondo restrições comportamentais e fisiológicas; (8) a variação temporal nos fatores bióticos (e.g., fatores de risco), abióticos (e.g., distribuição de chuvas), e no padrão de reprodução das espécies pode interferir na estrutura das assembleias de girinos tropicais. A variação temporal na heterogeneidade ambiental dos riachos da REGUA resultou na previsibilidade das assembleias locais de girinos, sendo que os parâmetros ambientais explicaram 23% da variação na sua composição. Os parâmetros espaciais explicaram uma porção menor da variação nas assembleias (16%), enquanto uma porção relativamente elevada da variação temporal da heterogeneidade ambiental foi espacialmente estruturada (18%). As variáveis abióticas que apresentaram as maiores correlação com a composição das assembleias de girinos foram a proporção de folhiço e de rochas no fundo do riacho, e secundariamente a profundidade, a condutividade e a temperatura. O gradiente gerado pela proporção de folhiço e de rochas representou a transição entre riachos permanentes e intermitentes. Este gradiente proporcionou o turnover de espécies, o qual também seguiu um gradiente de condutividade, temperatura, profundidade, e em menor extensão, de hidroperíodo e largura, que estiveram fortemente associado ao grau de permanência dos riachos. Estes resultados corroboram tanto a hipótese do controle ambiental, como do controle biótico de comunidades e indicam que a variação temporal da heterogeneidade ambiental e a variação na posição geográfica são importantes para a estruturação local de assembleias de girinos da REGUA. Os resultados também permitiram distinguir entre assembleias de girinos exclusivas de riachos permanentes, exclusivas de riachos intermitentes e aquelas registradas nos dois tipos de riachos. Os resultados deste capítulo são relevantes para compreender em que extensão os efeitos da variação temporal na heterogeneidade ambiental e de processos espaciais afetam localmente a estruturação de assembleias de girinos.

The spatial pattern of the small fish community in the Biandantang Lake - a small shallow lake along the middle reach of the Yangtze River, China

The spatial pattern of the small fish community was studied seasonally in 1996 in the Biandantang Lake. Based on plant cover, the lake was divided into five habitats, arranged in the order by plant structure complexity from complex to simple: Vallisneria spiralis habitat (V habitat), Vallisneria spiralis-Myriophyllum spicatum habitat (V-M habitat), Myriophyllum spicatum habitat (M habitat), Nelunbo nucefera habitat (N habitat), and no vegetation habitat (NV habitat). A modified popnet was used for quantitative sampling of small fishes. A total of 16 fish species were collected; Hypseleotris swinhonis, Ctenogobius giurinus, Pseudorasbora parva, Carassius auratus and Paracheilognathus imberis were the five numerically dominant species. In both summer and autumn, the total density of small fishes was about 10 ind m(-2). Generally, Ctenogobius giurinus, a sedatory, benthic fish, was distributed more or less evenly among the five habitats, while the other four species had lower densities in the N habitat and NV habitat, which had the simplest structures. The distribution of the small fish species showed seasonal variations. In winter, most species concentrated in the V habitat, which had the most complex structure. In spring, the fish had low densities in the N and NV habitat, and were more or less evenly distributed in the other habitats. In summer, the fish had a low density in the NV habitat, and were evenly distributed in the other habitats. In autumn, the fish had higher densities in the V-M and M habitats than in the others. Generally, spatial overlaps between the dominant species were higher in winter than in the other seasons. It was suggested that the variations in the importance of predation risk and resource competition in habitat choice determined the seasonal changes of spatial patterns in the small fishes in the Biandantang Lake.

A generalized functional response for predators that switch between multiple prey species

We develop a theory for the food intake of a predator that can switch between multiple prey species. The theory addresses empirical observations of prey switching and is based on the behavioural assumption that a predator tends to continue feeding on prey that are similar to the prey it has consumed last, in terms of, e.g., their morphology, defences, location, habitat choice, or behaviour. From a predator's dietary history and the assumed similarity relationship among prey species, we derive a general closed-form multi-species functional response for describing predators switching between multiple prey species. Our theory includes the Holling type II functional response as a special case and makes consistent predictions when populations of equivalent prey are aggregated or split. An analysis of the derived functional response enables us to highlight the following five main findings. (1) Prey switching leads to an approximate power-law relationship between ratios of prey abundance and prey intake, consistent with experimental data. (2) In agreement with empirical observations, the theory predicts an upper limit of 2 for the exponent of such power laws. (3) Our theory predicts deviations from power-law switching at very low and very high prey-abundance ratios. (4) The theory can predict the diet composition of a predator feeding on multiple prey species from diet observations for predators feeding only on pairs of prey species. (5) Predators foraging on more prey species will show less pronounced prey switching than predators foraging on fewer prey species, thus providing a natural explanation for the known difficulties of observing prey switching in the field. (C) 2013 Elsevier Ltd. All rights reserved.

Linking pesticide exposure and spatial dynamics: An individual-based model of wood mouse (Apodemus sylvaticus) populations in agricultural landscapes

The wood mouse is a common and abundant species in agricultural landscape and is a focal species in pesticide risk assessment. Empirical studies on the ecology of the wood mouse have provided sufficient information for the species to be modelled mechanistically. An individual-based model was constructed to explicitly represent the locations and movement patterns of individual mice. This together with the schedule of pesticide application allows prediction of the risk to the population from pesticide exposure. The model included life-history traits of wood mice as well as typical landscape dynamics in agricultural farmland in the UK. The model obtains a good fit to the available population data and is fit for risk assessment purposes. It can help identify spatio-temporal situations with the largest potential risk of exposure and enables extrapolation from individual-level endpoints to population-level effects. Largest risk of exposure to pesticides was found when good crop growth in the “sink” fields coincided with high “source” population densities in the hedgerows. Keywords: Population dynamics, Pesticides, Ecological risk assessment, Habitat choice, Agent-based model, NetLogo

Abundance and distribution of juvenile pink shrimps Farfantepenaeus spp. in a mangrove estuary and adjacent bay on the northern shore of São Paulo State, southeastern Brazil

Fundação de Amparo à Pesquisa do Estado de São Paulo (FAPESP)

Absence of consistent genetic differentiation among several morphs of Actinia (Actiniaria: Actiniidae) occurring in the portuguese coast

Actinia equina, the beadlet sea anemone, is a very labile species, displaying variable colour patterns, broad habitat choice and diverse modes of reproduction. Historically, studies using genetic markers such as allozymes and differences in habitat choice lead several authors to propose that different colour morphs could represent different species. One of the species defined was A. fragacea. In this paper, the relationships between brown, red and green colour morphs of A. equina and A. fragacea were studied, using two DNA fragments (one mitochondrial and one nuclear). Individuals were sampled from three different areas in Portugal separated by a maximum distance of 500 km. This is the first study applying direct sequencing of selected gene fragments to approach the validity of Actinia morphs as different genetic entities. The results show that, at least in the Portuguese coast, these colour morphs do not correspond to the two valid species recognized in the literature. The existence of cryptic species is discussed.