Análise morfométrica das estruturas maxilo-mandibulares de indivíduos pré-colombianos e contemporâneos da Costa Central do Peru

O objetivo deste trabalho foi avaliar morfometricamente as modificações ocorridas ao longo de 500 anos nas estruturas maxilo-mandibulares de indivíduos da Costa Central do Peru. Foram utilizadas telerradiografias laterais de 30 crânios secos, sem deformidades esqueléticas e em normoclusão, do período Pré-colombiano (grupo Pré-colombiano) e de 30 peruanos nativos contemporâneos, com características esqueléticas e oclusais semelhantes, provenientes da mesma região geográfica (grupo Contemporâneo). Estas telerradiografias foram digitalizadas e 14 pontos cefalométricos foram marcados e utilizados como marcos anatômicos homólogos para a análise morfométrica. O tamanho do centróide, a forma e a alometria foram comparados entre os grupos para a amostra total, para homens e para mulheres, pelos testes de one-way ANOVA, função discriminante e regressão multivariada, respectivamente. As mesmas avaliações foram realizadas para homens e mulheres do mesmo grupo. O tamanho do centróide foi significativamente maior para o grupo Contemporâneo tanto para a amostra total, quanto para homens e mulheres, demonstrando que as estruturas maxilo-mandibulares dos indivíduos contemporâneos é maior do que de seus ancestrais. Quando homens e mulheres foram comparados intra-grupos o tamanho do centróide foi significativamente maior para os homens do grupo Contemporâneo, com a mesma tendência para os homens pré-colombianos, porém sem significância estatística. Observou-se diferenças significativas entre os grupos para a forma das estruturas maxilo-mandibulares indicando que ao longo do tempo houve um deslocamento posterior da região da pré-maxila e um deslocamento considerável para cima e para trás da apófise coronóide, uma abertura do ângulo na região goníaca e um alongamento no sentido vertical da região da sínfise mandibular. Essas mudanças morfológicas foram mais evidentes nas mulheres do que nos homens, parecendo haver maior efeito das tendências seculares nas mulheres. Não houve diferenças morfológicas entre homens e mulheres quando comparados intra-grupos, demonstrando que os resultados observados não foram influenciados pelo dimorfismo sexual. As diferenças de tamanho existentes intra-grupos foram responsáveis por apenas 6% das diferenças de forma, e portanto não há efeito causal do tamanho sobre as diferenças de forma observadas entre os grupos. Pode-se concluir que as diferenças morfológicas das estruturas maxilo-mandibulares encontradas neste estudo sugerem mudanças nas condições ambientais da população da Costa Central do Peru ao longo de 500 anos e podem contribuir para o melhor esclarecimento dos fatores etiológicos das más oclusões.

Morphometrical, biochemical and molecular tools for assessing biodiversity. An example in Plebeia remota (Holmberg, 1903) (Apidae, Meliponini)

We see today many efforts to quantify biodiversity in different biomes. It is very important then to develop and to apply other methodologies that allow us to assess biodiversity. Here we present an example of application of three tools with this goal. We analyzed two populations of Plebeia remota from two distinct biomes that already showed several differences in morphology and behavior. Based on these differences, it has been suggested that the populations of Cunha and Prudentopolis do not represent a single species. In order to verify the existence or absence of gene flow between these two groups, we characterized the patterns of mtDNA through RFLP, the patterns of wing venation through geometric morphometry, and the cuticular hydrocarbons through gas chromatography-mass spectrometry. We used bees collected in these two locations and also from colonies which have being kept for around 9 years at Sao Paulo University. We found six different haplotypes in these specimens, of which three of them occurred exclusively in the population of Cunha and three only in the Prudentopolis population. The fact that the populations do not share haplotypes suggests no maternal gene flow between them. The two populations were differentiated by the pattern of the wing veins. They also had different mixtures of cuticle hydrocarbons. Furthermore it was shown that the colonies kept at the university did not hybridize. These two groups may constitute different species. We also show here the importance of using other methodologies than traditional taxonomy to assess and understand biodiversity, especially in bees.

Diversificação evolutiva de gobídeos no litoral brasileiro: padrões citogenéticos e ecomorfológicos

The fishes of the order Perciformes are characterized as an important model for understanding the genetic structure of marine populations, because besides they present examples of conservation chromosomal, also they present the karyotype diversification for some groups. Gobiidae family is the most specious in the marine environment. Among its representatives, many species are part of a cryptic fauna little noticed and studied, a wide distribution with behavioral and reproductive characteristics, that make them conducive to the action of biogeographical barriers. Morphologically this family presents reduced body structures through simplification and regressions. Despite their importance in evolutionary inferences, cytogenetics data are incipient facing their species diversity, especially with western Atlantic species. In order to estimate the evolutionary diversity in Gobiidae, it were developed cytogenetic analysis and the standards body, through geometric morphometrics in five species on the Brazilian coast, Coryphopterus glaucofraenum, Bathygobius mystacium, B. soporator, Ctenogobius smaragdus e C. Boleosoma. The data show significant karyotype and morphological diversity among the species. The pericentric inversions and mergers play an important role in chromosomal evolution of this family, causing karyotypic structural and numerical differences in all species. Karyotypic and morphological comparisons among geographic samples of B. soporator from the coast of Maranhão, Rio Grande do Norte and Bahia showed cytogenetics patterns commons, but different morphological patterns. A sample from the Atol das Rocas revealed conspicuous morphological and karyotypic differentiation of another continental populations, confirming the presence of a new island species. The approaches done reveal diversification consistent with characteristics of a group of low vagile and largely able to environmental selection due from peculiar ecological requirements

Variação morfológica de Imantodes cenchoa (Linnaeus, 1758) (Serpentes, Dipsadidae) na América do Sul, com a descrição de duas novas espécies

Imantodes compreende um grupo de serpentes primariamente arborícolas, com ampla distribuição Neotropical, agrupando sete espécies atualmente reconhecidas com grande variação cromática, sendo I. cenchoa a que apresenta a maior distribuição (sul do México ao norte da Argentina). A necessidade de estudos abordando a variação morfológica de I. cenchoa na América do Sul foi apontada por alguns autores, que sugeriram a provável existência de mais de um táxon distinguível. Estudos com base em dados moleculares apresentaram resultados divergentes quanto à diversidade genética de I. cenchoa. Assumindo que a diferenciação genética pode refletir a variação morfológica, a proposição de barreiras impedindo o fluxo gênico de I. cenchoa pode ser testada mediante um estudo criterioso de variação morfológica das populações sul-americanas, abordando e verificando os padrões populacionais e a estruturação destes padrões. Para isto, este trabalho foi organizado em três seções: Introdução Geral, capítulos 1 e 2. Na Introdução Geral apresentamos informação sobre polimorfismo cromático em Imantodini e um breve histórico taxonômico de Imantodes cenchoa. No capítulo 1 abordamos a variação morfológica externa e interna das populações de I. cenchoa (folidose, morfometria linear e geométrica, coloração e padrão de manchas e hemipênis), dentro e entre as diferentes fitofisionomias do Brasil, comparando-a às demais populações da América do Sul, e descrevemos uma nova espécie para a Mata Atlântica. No capítulo 2, a partir da análise comparativa do material de Imantodes da América do Sul cis e trans-Andina, descrevemos uma nova espécie de Imantodes para a Cordilheira Oriental da Colômbia.

Ecomorfologia de três espécies de Dipsas Laurenti, 1768 e Sibynomorphus Fitzinger, 1843 (Dipsadidae: Dipsadinae)

Fatores ecológicos como a utilização do ambiente e a alimentação, podem influenciar na morfologia corporal e cefálica de um organismo, porém, esta também pode ser o reflexo da linhagem filogenética a que ele pertence. A subfamília Dipsadinae inclui serpentes sul-americanas formadas por dois clados, um incluindo Geophis e Atractus e outro incluindo Dipsas, Ninia, Sibon e Sibynomorphus, que formam a tribo Dipsadini. As serpentes desta tribo apresentam um alto grau de modificações na morfologia corporal e cefálica relacionadas ao ambiente e a alimentação malacófaga. As espécies de Dipsas e Sibon possuem especializações relacionadas à utilização do ambiente arborícola, conferindo um melhor desempenho na locomoção pela vegetação, enquanto que as espécies de Sibynomorphus, em sua grande maioria, são adaptadas ao ambiente terrestre. Quanto à alimentação todas elas apresentam, em diferentes graus, uma série de modificações cranianas relacionadas à manipulação e ingestão de gastrópodes, lesmas e caramujos. Considerando que existe uma relação direta entre a forma da cabeça e a dieta, este trabalho tem como objetivo analisar as divergências da morfologia cefálica relacionadas à dieta entre espécies de Dipsas e Sibynomorphus, assim como analisar possíveis convergências entre espécies destes gêneros e Tomodon dorsatus, espécie da tribo Tachymenini, reconhecidamente especialista em lesmas. Para isto este trabalho está estruturado em duas partes: a primeira refere-se à Introdução geral, onde é apresentada uma ampla abordagem sobre as adaptações morfológicas relacionadas à alimentação dos Dipsadini, assim como as vantagens da utilização da técnica de morfometria geométrica em estudos morfológicos; e a segunda parte refere-se ao trabalho propriamente dito, intitulado “Ecomorfologia de três espécies de Dipsas Laurenti, 1768 e Sibynomorphus Fitzinger, 1843 (Dipsadidae: Dipsadinae)”.

Morfometria de rainhas do gênero ATTA (Hymenoptera: Formicidae: Myrmicinae), arquitetura interna e infecção pelo fundo parasita Escovopsis de ninhos iniciais

Pós-graduação em Ciências Biológicas (Zoologia) - IBB

Genetic and morphological variation and differentiation of Raja clavata populations in the European seas: marker development and preliminary data

In this study the population structure and connectivity of the Mediterranean and Atlantic Raja clavata (L., 1758) were investigated by analyzing the genetic variation of six population samples (N = 144) at seven nuclear microsatellite loci. The genetic dataset was generated by selecting population samples available in the tissue databases of the GenoDREAM laboratory (University of Bologna) and of the Department of Life Sciences and Environment (University of Cagliari), all collected during past scientific surveys (MEDITS, GRUND) from different geographical locations in the Mediterranean basin and North-east Atlantic sea, as North Sea, Sardinian coasts, Tuscany coasts and Cyprus Island. This thesis deals with to estimate the genetic diversity and differentiation among 6 geographical samples, in particular, to assess the presence of any barrier (geographic, hydrogeological or biological) to gene flow evaluating both the genetic diversity (nucleotide diversity, observed and expected heterozygosity, Hardy- Weinberg equilibrium analysis) and population differentiation (Fst estimates, population structure analysis). In addition to molecular analysis, quantitative representation and statistical analysis of morphological individuals shape are performed using geometric morphometrics methods and statistical tests. Geometric coordinates call landmarks are fixed in 158 individuals belonging to two population samples of Raja clavata and in population samples of closely related species, Raja straeleni (cryptic sibling) and Raja asterias, to assess significant morphological differences at multiple taxonomic levels. The results obtained from the analysis of the microsatellite dataset suggested a geographic and genetic separation between populations from Central-Western and Eastern Mediterranean basins. Furthermore, the analysis also showed that there was no separation between geographic samples from North Atlantic Ocean and central-Western Mediterranean, grouping them to a panmictic population. The Landmark-based geometric morphometry method results showed significant differences of body shape able to discriminate taxa at tested levels (from species to populations).

An integrated approach to delimiting species borders in the genus Chrysotoxum Meigen, 1803 (Diptera: Syrphidae), with description of two new species

Integrative taxonomy tests the validity of taxa using methods additional to traditional morphology. The existence of two different morphotypes in specimens identified as Chrysotoxum vernale Loew (Diptera: Syrphidae) prompted their taxonomic study using an integrative approach that included morphology, wing and male-surstylus geometric morphometrics, genetic and ecological analyses. As a result, a new species is recognised, Chrysotoxum montanum Nedeljković & Vujić sp. nov., and C. vernale is re-defined. A lectotype and paralectotypes are designated for C. vernale to stabilize this concept. An additional species, Chrysotoxum orthostylum Vujić sp. nov., with distinctive male genitalia is also described. The three species share an antenna with the basoflagellomere shorter than the scape plus pedicel and terga with yellow fasciae not reaching the lateral margins. This study confirms the value of integrative approach for resolving species boundaries.

How much is there really? Why stereology is essential in lung morphometry

Quantitative data on lung structure are essential to set up structure-function models for assessing the functional performance of the lung or to make statistically valid comparisons in experimental morphology, physiology, or pathology. The methods of choice for microscopy-based lung morphometry are those of stereology, the science of quantitative characterization of irregular three-dimensional objects on the basis of measurements made on two-dimensional sections. From a practical perspective, stereology is an assumption-free set of methods of unbiased sampling with geometric probes, based on a solid mathematical foundation. Here, we discuss the pitfalls of lung morphometry and present solutions, from specimen preparation to the sampling scheme in multiple stages, for obtaining unbiased estimates of morphometric parameters such as volumes, surfaces, lengths, and numbers. This is demonstrated on various examples. Stereological methods are accurate, efficient, simple, and transparent; the precision of the estimates depends on the size and distribution of the sample. For obtaining quantitative data on lung structure at all microscopic levels, state-of-the-art stereology is the gold standard.

A geometric approach to trajectory design for an autonomous underwater vehicle : surveying the bulbous bow of a ship

In this paper, we present a control strategy design technique for an autonomous underwater vehicle based on solutions to the motion planning problem derived from differential geometric methods. The motion planning problem is motivated by the practical application of surveying the hull of a ship for implications of harbor and port security. In recent years, engineers and researchers have been collaborating on automating ship hull inspections by employing autonomous vehicles. Despite the progresses made, human intervention is still necessary at this stage. To increase the functionality of these autonomous systems, we focus on developing model-based control strategies for the survey missions around challenging regions, such as the bulbous bow region of a ship. Recent advances in differential geometry have given rise to the field of geometric control theory. This has proven to be an effective framework for control strategy design for mechanical systems, and has recently been extended to applications for underwater vehicles. Advantages of geometric control theory include the exploitation of symmetries and nonlinearities inherent to the system. Here, we examine the posed inspection problem from a path planning viewpoint, applying recently developed techniques from the field of differential geometric control theory to design the control strategies that steer the vehicle along the prescribed path. Three potential scenarios for surveying a ship?s bulbous bow region are motivated for path planning applications. For each scenario, we compute the control strategy and implement it onto a test-bed vehicle. Experimental results are analyzed and compared with theoretical predictions.

A first extension of geometric control theory to underwater vehicles

This paper serves as a first study on the implementation of control strategies developed using a kinematic reduction onto test bed autonomous underwater vehicles (AUVs). The equations of motion are presented in the framework of differential geometry, including external dissipative forces, as a forced affine connection control system. We show that the hydrodynamic drag forces can be included in the affine connection, resulting in an affine connection control system. The definitions of kinematic reduction and decoupling vector field are thus extended from the ideal fluid scenario. Control strategies are computed using this new extension and are reformulated for implementation onto a test-bed AUV. We compare these geometrically computed controls to time and energy optimal controls for the same trajectory which are computed using a previously developed algorithm. Through this comparison we are able to validate our theoretical results based on the experiments conducted using the time and energy efficient strategies.

Geometric Control Theory and its Application to Underwater Vehicles

This dissertation is based on theoretical study and experiments which extend geometric control theory to practical applications within the field of ocean engineering. We present a method for path planning and control design for underwater vehicles by use of the architecture of differential geometry. In addition to the theoretical design of the trajectory and control strategy, we demonstrate the effectiveness of the method via the implementation onto a test-bed autonomous underwater vehicle. Bridging the gap between theory and application is the ultimate goal of control theory. Major developments have occurred recently in the field of geometric control which narrow this gap and which promote research linking theory and application. In particular, Riemannian and affine differential geometry have proven to be a very effective approach to the modeling of mechanical systems such as underwater vehicles. In this framework, the application of a kinematic reduction allows us to calculate control strategies for fully and under-actuated vehicles via kinematic decoupled motion planning. However, this method has not yet been extended to account for external forces such as dissipative viscous drag and buoyancy induced potentials acting on a submerged vehicle. To fully bridge the gap between theory and application, this dissertation addresses the extension of this geometric control design method to include such forces. We incorporate the hydrodynamic drag experienced by the vehicle by modifying the Levi-Civita affine connection and demonstrate a method for the compensation of potential forces experienced during a prescribed motion. We present the design method for multiple different missions and include experimental results which validate both the extension of the theory and the ability to implement control strategies designed through the use of geometric techniques. By use of the extension presented in this dissertation, the underwater vehicle application successfully demonstrates the applicability of geometric methods to design implementable motion planning solutions for complex mechanical systems having equal or fewer input forces than available degrees of freedom. Thus, we provide another tool with which to further increase the autonomy of underwater vehicles.

Controlling a submerged rigid body : a geometric analysis

In this paper we analyze the equations of motion of a submerged rigid body. Our motivation is based on recent developments done in trajectory design for this problem. Our goal is to relate some properties of singular extremals to the existence of decoupling vector fields. The ideas displayed in this paper can be viewed as a starting point to a geometric formulation of the trajectory design problem for mechanical systems with potential and external forces.