Molecular modeling of Bt Cry1Ac (DI–DII)–ASAL (Allium sativum lectin)–fusion protein and its interaction with aminopeptidase N (APN) receptor of Manduca sexta

Genetic engineering of Bacillus thuringiensis (Bt) Cry proteins has resulted in the synthesis of various novel toxin proteins with enhanced insecticidal activity and specificity towards different insect pests. In this study, a fusion protein consisting of the DI–DII domains of Cry1Ac and garlic lectin (ASAL) has been designed in silico by replacing the DIII domain of Cry1Ac with ASAL. The binding interface between the DI–DII domains of Cry1Ac and lectin has been identified using protein–protein docking studies. Free energy of binding calculations and interaction profiles between the Cry1Ac and lectin domains confirmed the stability of fusion protein. A total of 18 hydrogen bonds was observed in the DI–DII–lectin fusion protein compared to 11 hydrogen bonds in the Cry1Ac (DI–DII–DIII) protein. Molecular mechanics/Poisson–Boltzmann (generalized-Born) surface area [MM/PB (GB) SA] methods were used for predicting free energy of interactions of the fusion proteins. Protein–protein docking studies based on the number of hydrogen bonds, hydrophobic interactions, aromatic–aromatic, aromatic–sulphur, cation–pi interactions and binding energy of Cry1Ac/fusion proteins with the aminopeptidase N (APN) of Manduca sexta rationalised the higher binding affinity of the fusion protein with the APN receptor compared to that of the Cry1Ac–APN complex, as predicted by ZDOCK, Rosetta and ClusPro analysis. The molecular binding interface between the fusion protein and the APN receptor is well packed, analogously to that of the Cry1Ac–APN complex. These findings offer scope for the design and development of customized fusion molecules for improved pest management in crop plants.

Estimation of BT Interference in OFDM Sub Carriers with Training Signals

While wireless LAN (WLAN) is very popular now a days, its performance deteriorates in the presence of other signals like Bluetooth (BT) signal that operate in the same band as WLAN. Present interference mitigation techniques in WLAN due to BT cancel interference in WLAN sub carrier where BT has hopped but do not cancel interference in the adjacent sub carriers. In this paper BT interference signal in all the OFDM sub carriers is estimated. That is, leakage of BT in other sub carriers including the sub carriers in which it has hopped is also measured. BT signals are estimated using the training signals of OFDM system. Simulation results in AWGN noise show that proposed algorithm agrees closely with theoretical results.

Estimation of BT interference and equivalent channel tap in multipath fading channel

One of the major sources of interference for WLANs operating in 2.4GHz unlicensed ISM is Bluetooth (BT). Though OFDM based WLAN's have features like strong immunity to multipath channel effects, its performance detoriates severely whenever there is BT operating nearby. Even for high SIR (Signal to Interference Ratio), performance does not improve much because WLAN is not able to estimate correctly all its channel parameters in presence of BT interference. So, in this paper, the authors propose an algorithm for estimating BT interference and equivalent channel filter tap values.

BT-benzo-29 inhibits bacterial cell proliferation by perturbing FtsZ assembly

We have identified a potent antibacterial agent N-(4-sec-butylphenyl)-2-(thiophen-2-yl)-1H-benzod]imidazole-4-carboxa mide (BT-benzo-29) from a library of benzimidazole derivatives that stalled bacterial division by inhibiting FtsZ assembly. A short (5 min) exposure of BT-benzo-29 disassembled the cytokinetic Z-ring in Bacillus subtilis cells without affecting the cell length and nucleoids. BT-benzo-29 also perturbed the localization of early and late division proteins such as FtsA, ZapA and SepF at the mid-cell. Further, BT-benzo-29 bound to FtsZ with a dissociation constant of 24 +/- 3 m and inhibited the assembly and GTPase activity of purified FtsZ. A docking analysis suggested that BT-benzo-29 may bind to FtsZ at the C-terminal domain near the T7 loop. BT-benzo-29 displayed significantly weaker inhibitory effects on the assembly and GTPase activity of two mutants (L272A and V275A) of FtsZ supporting the prediction of the docking analysis. Further, BT-benzo-29 did not appear to inhibit DNA duplication and nucleoid segregation and it did not perturb the membrane potential of B. subtilis cells. The results suggested that BT-benzo-29 exerts its potent antibacterial activity by inhibiting FtsZ assembly. Interestingly, BT-benzo-29 did not affect the membrane integrity of mammalian red blood cells. BT-benzo-29 bound to tubulin with a much weaker affinity than FtsZ and exerted significantly weaker effects on mammalian cells than on the bacterial cells indicating that the compound may have a strong antibacterial potential.

Bt固体发酵研究

苏云金芽抱杆菌杀虫剂作用于多种鳞翅目害虫。是目前应用最广泛的微生物杀虫剂。固体发酵苏云金芽抱杆菌，获得BT可湿性粉剂，‘同液体深层发酵相比，其回收工艺简单，收率高，产量大，使用设备成本低，因而可降低苏云金芽抱杆菌杀虫剂的生产成本。按苏云金芽抱杆菌的固体发酵路线，本课题从中国科学院沈阳应用生态研究所保存的4支菌株和从玉米螟病虫上分离的2支菌株中优选了适合生产的高毒力菌株05，06，优选出液体培养基的主要成分：596豆饼粉和296玉米粉和4种无机离子浓度。摇瓶发酵种子液，发酵时间36小时，抱晶同步率在9096以上，芽抱数高于30*10