The Trypanosoma cruzi Genome Project: Nuclear Karyotype and Gene Mapping of Clone CL Brener

By using improved pulsed field gel electrophoresis conditions, the molecular karyotype of the reference clone CL Brener selected for Trypanosoma cruzi genome project was established. A total of 20 uniform chromosomal bands ranging in size from 0.45 to 3.5 Megabase pairs (Mbp) were resolved in a single run. The weighted sum of the chromosomal bands was approximately 87 Mbp. Chromoblots were hybridized with 39 different homologous probes, 13 of which identified single chromosomes. Several markers showed linkage and four different linkage groups were identified, each comprising two markers. Densitometric analysis suggests that most of the chromosomal bands contain two or more chromosomes representing either homologous chromosomes and/or heterologous chromosomes with similar sizes

Geographic weighted regression: applicability to epidemiological studies of leprosy

Abstract: INTRODUCTION: Geographic information systems (GIS) enable public health data to be analyzed in terms of geographical variability and the relationship between risk factors and diseases. This study discusses the application of the geographic weighted regression (GWR) model to health data to improve the understanding of spatially varying social and clinical factors that potentially impact leprosy prevalence. METHODS: This ecological study used data from leprosy case records from 1998-2006, aggregated by neighborhood in the Duque de Caxias municipality in the State of Rio de Janeiro, Brazil. In the GWR model, the associations between the log of the leprosy detection rate and social and clinical factors were analyzed. RESULTS: Maps of the estimated coefficients by neighborhood confirmed the heterogeneous spatial relationships between the leprosy detection rates and the predictors. The proportion of households with piped water was associated with higher detection rates, mainly in the northeast of the municipality. Indeterminate forms were strongly associated with higher detections rates in the south, where access to health services was more established. CONCLUSIONS: GWR proved a useful tool for epidemiological analysis of leprosy in a local area, such as Duque de Caxias. Epidemiological analysis using the maps of the GWR model offered the advantage of visualizing the problem in sub-regions and identifying any spatial dependence in the local study area.

Parâmetros erosividade da chuva e da enxurrada correlacionados com as perdas de solo de um solo Bruno Não-Cálcico Vértico em Sumé (PB)

Foram estudadas correlações lineares simples entre os parâmetros erosividade da chuva e da enxurrada e as perdas de solo provocadas por chuvas erosivas num solo Bruno Não-Cálcico Vértico. Os dados correspondentes aos anos de 1986-1990 foram obtidos na estação experimental de Sumé (PB), pertencente à Universidade Federal da Paraíba-UFPB. Os parâmetros erosividade da chuva e da enxurrada estudados foram: (a) altura total da chuva (P), em mm; (b) intensidades máximas (In), ocorridas nos tempos de 5; 10; 15; 20; 25; 30; 35; 40; 45; 50; 55; 60 e 120 minutos, respectivamente, em mm h-1; (c) energia cinética total, pelo método de Wischmeier e Smith (Ec) e pelo método de Wagner e Massambani (EcW), em MJ ha-1; (d) somatório da energia cinética de intensidades superior a 10 mm h-1 (Ec > 10 e EcW > 10) em MJ ha-1; (e) somatório da energia cinética de intensidades superior a 25 mm h-1 (Ec > 25 e EcW > 25), em MJ ha-1; (f) produtos da energia cinética total pelas intensidades máximas de chuva em intervalos crescentes de tempo (EIn), ou seja: EI5; EI10; EI15; EI20; EI25; EI30; EIW30; EI35; EI40; EI45; EI50; EI55; EI60 e EI120, em MJ mm ha-1 h-1; (g) produtos da altura total da chuva pelas intensidades máximas das chuvas em intervalos crescentes de tempo (PIn), ou seja: PI5; PI10; PI15; PI20; PI25; PI30; PI35; PI40; PI45; PI50; PI55; PI60 e PI120, em mm² h-1, e (h) volume de enxurrada (Vu), em m³. O parâmetro volume de enxurrada (Vu) foi o que melhor estimou (r = 0,812) as perdas de solo em Sumé (PB). Dentre os parâmetros erosividade da chuva, o que melhor se correlacionou com as perdas de solo foi o parâmetro PI25 (r = 0,753). As equações de Wischmeier & Smith e de Wagner & Massambani, utilizadas no cálculo da energia cinética total da chuva, apresentaram o mesmo grau de precisão na estimativa das perdas de solo.

Efeito do desmatamento da caatinga sobre as perdas de solo e água de um Luvissolo em Sumé (PB)

Foram estudados os efeitos do desmatamento da caatinga sobre as perdas de solo e água provocadas por chuvas erosivas num Luvissolo. Os dados relativos aos anos de 1983-1990 foram obtidos na Estação Experimental de Sumé (PB), pertencente à Universidade Federal da Paraíba - UFPB. Os tratamentos consistiram de duas parcelas desmatadas, uma parcela com caatinga nativa, uma parcela com caatinga nova, duas macroparcelas com caatinga nativa e duas macroparcelas desmatadas. Nas parcelas desmatadas, as perdas de solo foram de 61,7 e 47,7 t ha-1 e as perdas de água de 224,2 e 241,0 mm. A parcela com caatinga nativa, quando comparada com a parcela desmatada, reduziu a perda de solo em cerca de 98% e a perda de água em torno de 73%. Nas macroparcelas desmatadas foram observadas perdas anuais de solo de 31 e 26 t ha-1 e de água de 151,3 e 131,5 mm. Nas macroparcelas com caatinga, houve uma redução de aproximadamente 99% das perdas de solo e 90% das perdas de água, em relação às macroparcelas desmatadas.

Basal temperature and thermal sum in phenological phases of nectarine and peach cultivars

The objective of this work was to evaluate basal temperature, thermal sum at different phenological stages, phenological phase duration, yield and seasonality of one nectarine and 14 peach cultivars, between 2006 and 2009. The considered phenological phases were: pruning-sprouting; sprouting-flowering, from swollen bud to open flower; flowering-fruiting, from petal fall to medium-sized fruit; and ripening. Minimum basal temperatures (Tb) obtained were: pruning-sprouting, 8°C, irrespective of the cultivars; sprouting-flowering, 10°C, except for 'Cascata 968', which required 8°C Tb; flowering-fruiting, 12°C, except for 'Oro Azteca', which required 14°C Tb; ripening, 14°C, except for 'Sunblaze', 'Diamante Mejorado' and 'Precocinho' with 12°C Tb. For most cultivars, the maximum basal temperatures were 30, 34, 34 and 28ºC for phases pruning-sprouting, sprouting-flowering, flowering-fruiting and ripening, respectively. 'Turmalina', 'Marli' and 'Tropic Beauty' showed average yields of 3,945.0, 3,969.3 and 3,954.0 kg ha-1, respectively, in 2009, while the nectarine 'Sunblaze' showed around 3,900 kg ha-1 in 2008 and 2009. The cultivars differed for their total cycle and for the accumulated thermal sums which varied, respectively, from 245 days and 1,881.4 degree-days for 'Oro Azteca', to144 days and 1,455.7 degree-days for 'Precocinho'.

Diffusion-weighted magnetic resonance imaging: biomarker for treatment response in oncology

The authors report a case where a quantitative assessment of the apparent diffusion coefficient (ADC) of liver metastasis in a patient undergoing chemotherapy has shown to be an effective early marker for predicting therapeutic response, anticipating changes in tumor size. A lesion with lower initial ADC value and early increase in such value in the course of the treatment tends to present a better therapeutic response.

Susceptibility weighted imaging: differentiating between calcification and hemosiderin

Objective:To present a detailed explanation on the processing of magnetic susceptibility weighted imaging (SWI), demonstrating the effects of echo time and sensitive mask on the differentiation between calcification and hemosiderin.Materials and Methods:Computed tomography and magnetic resonance (magnitude and phase) images of six patients (age range 41– 54 years; four men) were retrospectively selected. The SWI images processing was performed using the Matlab’s own routine.Results:Four out of the six patients showed calcifications at computed tomography images and their SWI images demonstrated hyperintense signal at the calcification regions. The other patients did not show any calcifications at computed tomography, and SWI revealed the presence of hemosiderin deposits with hypointense signal.Conclusion:The selection of echo time and of the mask may change all the information on SWI images, and compromise the diagnostic reliability. Amongst the possible masks, the authors highlight that the sigmoid mask allows for contrasting calcifications and hemosiderin on a single SWI image.

Global coordination: weighted voting

In order to halt the depletion of global ecological capital, a number of different kinds of meetings between Governments of countries in the world has been scheduled. The need for global coordination of environmental policies has become ever more obvious, supported by more and more evidence of the running down of ecological capital. But there are no formal or binding arrangements in sight, as global environmental coordination suffers from high transaction costs (qualitative voting). The CO2 equivalent emissions, resulting in global warming, are driven by the unstoppable economic expansion in the global market economy, employing mainly fossil fuel generated energy, although at the same time lifting sharply the GDP per capita of several emerging countries. Only global environmental coordination on the successful model of the World Band and the IMF (quantitative voting) can stem the rising emissions numbers and stop further environmental degradation. However, the system of weighted voting in the WB and the IMF must be reformed by reducing the excessive voting power disparities, for instance by reducing all member country votes by the cube root expression.