The performance of an in-house nested-PCR technique for pleural tuberculosis diagnoses

Introduction This study evaluated the performance of an in-house nested-PCR system for the detection of the Mycobacterium tuberculosis complex in pleural fluid, blood and urine samples from pleural effusion tuberculosis patients by health services physicians in Pernambuco, Brazil. Methods A prospective double-blind study with 37 hospitalized patients of both sexes, aged over 15, was used to investigate the diagnosis of pleural effusion. The criteria used to define the cases included the demonstration of bacillus in biological samples by smear or culture or by a granulomatous finding in the histopathological examination, associated with an evident response to specific treatments to each clinical situation. Pleural fluid, blood and urine samples were collected and subjected to routine tests and the nested PCR technique to assess for M. tuberculosis amplification. Results In total, 37 pleural effusion patients took part in the study, of whom 19 (51.3%) had tubercular etiologies and 18 (48.7%) had etiologies from other causes. When the pleural fluid, blood and/or urine sample in-house nested-PCR sensitivities were evaluated simultaneously, the results were positive regardless of the biological specimen (the sensitivity was 84.2%); however, when the blood and/or urine samples were analyzed together, the sensitivity was 72.2%. When the pleural fluid samples were evaluated alone, the sensitivity was only 33.3%. Conclusions The performance of the diagnostic pleural tuberculosis nested-PCR was directly related to the diversity of the samples collected from the same patient. Additionally, this study may identify a need to prioritize non-invasive blood and urine collection for this diagnosis.

Performance of the Vitek 2 system software version 5.03 in the bacterial identification and antimicrobial susceptibility test: evaluation study of clinical and reference strains of Gram-positive cocci

Introduction. The genera Enterococcus, Staphylococcus and Streptococcus are recognized as important Gram-positive human pathogens. The aim of this study was to evaluate the performance of Vitek 2 in identifying Gram-positive cocci and their antimicrobial susceptibilities. Methods. One hundred four isolates were analyzed to determine the accuracy of the automated system for identifying the bacteria and their susceptibility to oxacillin and vancomycin. Results. The system correctly identified 77.9% and 97.1% of the isolates at the species and genus levels, respectively. Additionally, 81.8% of the Vitek 2 results agreed with the known antimicrobial susceptibility profiles. Conclusion. Vitek 2 correctly identified the commonly isolated strains; however, the limitations of the method may lead to ambiguous findings.

Performance of direct immunofluorescence assay for the detection of human metapneumovirus under clinical laboratory settings

ABSTRACT INTRODUCTION: Human metapneumovirus (hMPV) is an emergent human respiratory pathogen. This study aimed to evaluate the performance of direct immunofluorescence (DIF) to detect hMPV in a clinical laboratory setting. METHODS: Nasopharyngeal aspirate samples (448) of children and adults with respiratory illness were used to detect hMPV by using DIF and real time quantitative reverse transcription-polymerase chain reaction (qRT-PCR) assays. RESULTS: In all, 36 (8%) samples were positive by DIF and 94 (21%) were positive by qRT-PCR. Direct immunofluorescence specificity was 99% and sensitivity was 38%. CONCLUSIONS: DIF is not very sensitive under clinical laboratory settings.

Vancomycin monitoring in term newborns: comparison of peak and trough serum concentrations determined by high performance liquid chromatography and fluorescence polarization immunoassay

INTRODUCTION: Peak and trough serum concentrations of vancomycin were determined in term newborn infants with confirmed or suspected Staphylococcus sp sepsis by high performance liquid chromatography and flourescence polarization immunoassay. OBJECTIVE: To statistically compare the results of the high performance liquid chromatography and flourescence polarization immunoassay techniques for measuring serum vancomycin concentrations. METHODS: Eighteen peak and 20 trough serum samples were assayed for vancomycin concentrations using high performance liquid chromatography and flourescence polarization immunoassay from October 1995 to October 1997. RESULTS: The linear correlation coefficients for high performance liquid chromatography and flourescence polarization immunoassay were 0.27 (peak, P = 0.110) and 0.26 (trough, P = 0.1045) respectively, which were not statistically significant. CONCLUSION: There was wide variation in serum vancomycin concentrations determined by high performance liquid chromatography as compared with those determined by flourescence polarization immunoassay. There was no recognizable pattern in the variability; in an apparently random fashion, the high performance liquid chromatography measurement was sometimes substantially higher than the flourescence polarization immunoassay measurement, and at other times it was substantially lower.

Performance de populações de Milho (Zea Mays L.) em terras altas sob cerrado no Centro-sul do estado do Tocantins, Brasil1

No estado do Tocantins, o cultivo de milho em "terras altas sob cerrado" apresenta níveis de produtividade variáveis, cuja média não ultrapassa 2 t/ha. Fatores de solo, como acidez, baixos teores de Ca, Mg, Ρ e Κ e matéria orgânica, concorrem para reduzir as produtividades. O desenvolvimento de materiais genéticos melhorados busca contribuir na superação dessas limitações. Como atividade inicial em um programa de melhoramento genético, o presente estudo avaliou um total de 160 populações de milho, nas safras 1994/95, 1995/96 e 1998/99, nos municípios de Pedro Afonso e Gurupi, em termos de produtividade de grãos (PG), altura da planta (AP), altura da espiga (AE) e dias para florescimento feminino (FF). Para PG, os efeitos de populações foram significativos em todas as avaliações, ocorrendo produtividades entre 1,59 t/ ha a 7,46 t/ha. Destacaram-se as populações IAPAR 51, EGO 17, CMS 08, CMS 50, COMPOSTO TERRAS BAIXAS, TAIÚBA, TAITINGA, CMS 28, CMS 15 e SIKALQ, em Pedro Afonso, e K9201, CMS 39, BR 105 e CMS 03, em Gurupi, com produtividades acima de 5 t/ha. As diferenças nas performances produtivas e agronômicas em Pedro Afonso e Gurupi, juntamente com efeitos significativos das interações populações χ locais, alertam para a condução de programas de melhoramento específicos para cada local.

Personal and Social Performance (PSP) scale for patients with schizophrenia: translation to Portuguese, cross-cultural adaptation and interrater reliability

INTRODUCTION: Schizophrenia is a chronic mental disorder associated with impairment in social functioning. The most widely used scale to measure social functioning is the GAF (Global Assessment of Functioning), but it has the disadvantage of measuring at the same time symptoms and functioning, as described in its anchors. OBJECTIVES:Translation and cultural adaptation of the PSP, proposing a final version in Portuguese for use in Brazil. METHODS: We performed five steps: 1) translation; 2) back translation; 3) formal assessment of semantic equivalence; 4) debriefing; 5) analysis by experts. Interrater reliability (Intraclass correlation, ICC) between two raters was also measured. RESULTS: The final version was applied by two independent investigators in 18 adults with schizophrenia (DSM-IV-TR). The interrater reliability (ICC) was 0.812 (p < 0.001). CONCLUSION: The translation and adaptation of the PSP had an adequate level of semantic equivalence between the Portuguese version and the original English version. There were no difficulties related to understanding the content expressed in the translated texts and terms. Its application was easy and it showed a good interrater reliability. The PSP is a valid instrument for the measurement of personal and social functioning in schizophrenia.

Valor prognóstico do índice de performance miocárdica no pós-operatório de cirurgia de revascularização miocárdica

OBJETIVO: Avaliar o valor preditivo do índice de performance miocárdica (IPM) para complicações cardiovasculares em pacientes de baixo risco no pós-operatório (PO) de cirurgia de revascularização miocárdica (CRM) no período de internação hospitalar. MÉTODOS: Foram estudados 80 pacientes submetidos a CRM com função ventricular esquerda adequada no pré-operatório, nos quais o IPM foi medido nas primeiras horas de pós-operatório. Os pacientes foram acompanhados até a alta hospitalar. A análise estatística incluiu teste qui-quadrado de Pearson, teste t de Student e teste de Mann-Whitney, além do cálculo do risco relativo, com intervalos de confiança de 95%, e das propriedades de sensibilidade e especificidade do índice, com elaboração de curva ROC. RESULTADOS: Os dados foram avaliados por dois observadores independentes, cegos aos dados clínicos, com variabilidade intra e interobservador não significativa. Encontrou-se IPM=0,43 como ponto de corte, considerando-se acima de 0,43 os pacientes com maior probabilidade de eventos no pós-operatório. Os eventos relevantes para análise foram IAM (RR 0,87; IC 0,21 - 3,65); fibrilação atrial (RR 0,65; IC 0,24 - 1,76); outras arritmias (RR 1,51; IC 0,36 - 6,33) e disfunção VE (RR 1,74; IC 0,31 - 9,88), não havendo associação entre pacientes com IPM>0,43 e a ocorrência destes eventos. O tempo de internação hospitalar foi similar, entre os grupos (p=0,999). CONCLUSÃO: Não houve associação do IPM com complicações cardiovasculares e maior tempo de internação neste grupo de pacientes, podendo-se considerar esse índice inadequado como método preditivo isolado.

Performance of Surgical Risk Scores to Predict Mortality after Transcatheter Aortic Valve Implantation

AbstractBackground:Predicting mortality in patients undergoing transcatheter aortic valve implantation (TAVI) remains a challenge.Objectives:To evaluate the performance of 5 risk scores for cardiac surgery in predicting the 30-day mortality among patients of the Brazilian Registry of TAVI.Methods:The Brazilian Multicenter Registry prospectively enrolled 418 patients undergoing TAVI in 18 centers between 2008 and 2013. The 30-day mortality risk was calculated using the following surgical scores: the logistic EuroSCORE I (ESI), EuroSCORE II (ESII), Society of Thoracic Surgeons (STS) score, Ambler score (AS) and Guaragna score (GS). The performance of the risk scores was evaluated in terms of their calibration (Hosmer–Lemeshow test) and discrimination [area under the receiver–operating characteristic curve (AUC)].Results:The mean age was 81.5 ± 7.7 years. The CoreValve (Medtronic) was used in 86.1% of the cohort, and the transfemoral approach was used in 96.2%. The observed 30-day mortality was 9.1%. The 30-day mortality predicted by the scores was as follows: ESI, 20.2 ± 13.8%; ESII, 6.5 ± 13.8%; STS score, 14.7 ± 4.4%; AS, 7.0 ± 3.8%; GS, 17.3 ± 10.8%. Using AUC, none of the tested scores could accurately predict the 30-day mortality. AUC for the scores was as follows: 0.58 [95% confidence interval (CI): 0.49 to 0.68, p = 0.09] for ESI; 0.54 (95% CI: 0.44 to 0.64, p = 0.42) for ESII; 0.57 (95% CI: 0.47 to 0.67, p = 0.16) for AS; 0.48 (95% IC: 0.38 to 0.57, p = 0.68) for STS score; and 0.52 (95% CI: 0.42 to 0.62, p = 0.64) for GS. The Hosmer–Lemeshow test indicated acceptable calibration for all scores (p > 0.05).Conclusions:In this real world Brazilian registry, the surgical risk scores were inaccurate in predicting mortality after TAVI. Risk models specifically developed for TAVI are required.