Molecular markers and human history: A tale of two haplogroup systems

To chronicle demographic movement across African Asian corridors, a variety of molecular (sequence analysis, restriction mapping and denaturing high performance liquid chromatography etc.) and statistical (correspondence analysis, AMOVA, calculation of diversity indices and phylogenetic inference, etc.) techniques were employed to assess the phylogeographic patterns of mtDNA control region and Y chromosomal variation among 14 sub-Saharan, North African and Middle Eastern populations. The patterns of genetic diversity revealed evidence of multiple migrations across several African Asian passageways as well within the African continent itself. The two-part analysis uncovered several interesting results which include the following: (1) a north (Egypt and Middle East Asia) to south (sub-Saharan Africa) partitioning of both mtDNA and Y chromosomal haplogroup diversity, (2) a genetic diversity gradient in sub-Saharan Africa from east to west, (3) evidence in favor of the Levantine Corridor over the Horn of Africa as the major genetic conduit since the Last Glacial Maximum, (4) a substantially higher mtDNA versus Y chromosomal sub-Saharan component in the Middle East collections, (5) a higher representation of East versus West African mtDNA haplotypes in the Arabian Peninsula populations versus no such bias in the Levant groups and lastly, (6) genetic remnants of the Bantu demographic expansion in sub-Saharan Africa. ^

A Tale of Two Fishes: Using Recreational Angler Records to Examine the Link Between Fish Catches and Floodplain Connections in a Subtropical Coastal River

In the tropical and subtropical wet and dry regions, maintaining natural hydrologic connections between coastal rivers and adjacent ephemeral wetlands is critical to conserving and sustaining high levels of fisheries production within these systems. Though there is a consensus that there is a need to maintain these natural connections, little is known about what attributes of floodplain inundation regimes are most important in sustaining fisheries production. Two attributes of the flood season and thus floodplain inundation that may be particularly influential to fisheries are the amplitude of the flood season (floodplain water depth and spatial extent of inundation) and the duration of the flood season (i.e., time floodplains are inundated). In mangrove-dominated Everglades coastal rivers, seasonal inundation of upstream marsh floodplains may play an important role in provisioning recreational fisheries; however, this relationship remains unknown. Using two Everglades coastal river fisheries as a model, we tested whether the amplitude of the flood season or the duration of the flood season is more important in explaining variation in angler catch records of common snook and largemouth bass collected from 1992 to 2012. We validated angler catches with fisheries-independent electrofishing conducted in the same region from 2004 to 2012. Our results showed (1) that bass angler catches tracked electrofishing catches, while snook catches were completely mismatched. And (2) that previous year's marsh dynamics, particularly the duration of the flood season, was more influential than the flood season amplitude in explaining variation in bass catches, such that bass angler catches were negatively correlated to the period time that floodplains remained disconnected from coastal rivers in the previous year, while snook catches were not very well explained by floodplain inundation terms.

Rainfall variability in the upper Napo River Basin, Ecuadorian Amazon

The purpose of this research was to investigate the influence of elevation and other terrain characteristics over the spatial and temporal distribution of rainfall. A comparative analysis was conducted between several methods of spatial interpolations using mean monthly precipitation values in order to select the best. Following those previous results it was possible to fit an Artificial Neural Network model for interpolation of monthly precipitation values for a period of 20 years, with input values such as longitude, latitude, elevation, four geomorphologic characteristics and anchored by seven weather stations, it reached a high correlation coefficient (r=0.85). This research demonstrated a strong influence of elevation and other geomorphologic variables over the spatial distribution of precipitation and the agreement that there are nonlinear relationships. This model will be used to fill gaps in time-series of monthly precipitation, and to generate maps of spatial distribution of monthly precipitation at a resolution of 1km2.

The vulnerability of aquatic systems of the Upper Napo River Basin (Ecuadorian Amazon) to human activities

Aquatic ecosystems exhibit different vulnerabilities to anthropogenic disturbances. I examined this problem in the Upper Napo River Basin (UNRB), Ecuador. I ranked from 1 to 5 aquatic ecosystem uniqueness, health and threats. I stratified the basin into five Ecological Drainage Units (EDU), 48 Aquatic Ecological Systems (AES), and 203 macrohabitats. I found main threats (habitat conversion/degradation, land development, mining, oil industries, and water diversion) cover 54% of the UNRB, but have different scores and extents in each EDU. I assessed the health of 111 AESs, under three land use treatments, by analyzing the streamside zone, physical forms, water quality, aquatic life, and hydrology. Overall, health of AESs varied from 5 to 2.58, with 5 being the highest level of health. Threats and health of AESs were inversely related (F=34.119, P