On the decline of 1st and 2nd order sensitivity with eccentricity

We studied the relationship between the decline in sensitivity that occurs with eccentricity for stimuli of different spatial scale defined by either luminance (LM) or contrast (CM) modulation. We show that the detectability of CM stimuli declines with eccentricity in a spatial frequency-dependent manner, and that the rate of sensitivity decline for CM stimuli is roughly that expected from their 1st order carriers, except, possibly, at finer scales. Using an equivalent noise paradigm, we investigated the possible reasons for why the foveal sensitivity for detecting LM and CM stimuli differs as well as the reason why the detectability of 1st order stimuli declines with eccentricity. We show the former can be modeled by an increase in internal noise whereas the latter involves both an increase in internal noise and a loss of efficiency. To encompass both the threshold and suprathreshold transfer properties of peripheral vision, we propose a model in terms of the contrast gain of the underlying mechanisms.

Vortex shedding from a row of square bars

Interactions of wakes in a flow past a row of square bars, which is placed across a uniform flow, are investigated by numerical simulations and experiments on the tassumption that the flow is two-dimensional and incompressible. At small Reynolds numbers the flow is steady and symmetric with respect not only to streamwise lines through the center of each square bar but also to streamwise centerlines between adjacent square bars. However, the steady symmetric flow becomes unstable at larger Reynolds numbers and make a transition to a steady asymmetric flow with respect to the centerlines between adjacent square bars in some cases or to an oscillatory flow in other cases. It is found that vortices are shed synchronously from adjacent square bars in the same phase or in anti-phase depending upon the distance between the bars when the flow is oscillatory. The origin of the transition to the steady asymmetric flow is identified as a pitchfork bifurcation, while the oscillatory flows with synchronous shedding of vortices are clarified to originate from a Hopf bifurcation. The critical Reynolds numbers of the transitions are evaluated numerically and the bifurcation diagram of the flow is obtained.

Visualising and controlling the flow in biomolecular systems at and between multiple scales:from atoms to hydrodynamics at different locations in time and space

A novel framework for modelling biomolecular systems at multiple scales in space and time simultaneously is described. The atomistic molecular dynamics representation is smoothly connected with a statistical continuum hydrodynamics description. The system behaves correctly at the limits of pure molecular dynamics (hydrodynamics) and at the intermediate regimes when the atoms move partly as atomistic particles, and at the same time follow the hydrodynamic flows. The corresponding contributions are controlled by a parameter, which is defined as an arbitrary function of space and time, thus, allowing an effective separation of the atomistic 'core' and continuum 'environment'. To fill the scale gap between the atomistic and the continuum representations our special purpose computer for molecular dynamics, MDGRAPE-4, as well as GPU-based computing were used for developing the framework. These hardware developments also include interactive molecular dynamics simulations that allow intervention of the modelling through force-feedback devices.