MorphCol 2004-2013. A collection of Fortran 77 programs for morphometry

This is a technical description in html format of simple fortran programs for Macintosh for the morphometric analysis of tests planktonic foraminifera under reflected light, with special focus on the Neogene group of Globorotalia menardii. The second part of this report gives information and performance tests about the development of AMOR (Automated Measurement system for the mORphometry of microfossils). AMOR is Windows based and helps to orientate and collect digital images of menardiform globorotalids. The above fortran programs may be useful to extract and analyze some morphometric parameters from images collected with AMOR. After unzipping the archive file please open the Start.html file using a common web browser like firefox. In case of any questions or problems, please contact Michael W. Knappertsbusch (mailto:michael.knappertsbusch@unibas.ch).

Geometric parameters of shoreface profiles of Laptev Sea erosion coast (Table 1)

Field investigations of the Laptev Sea shoreface morphology were carried out (1) off erosional shores composed of unconsolidated sediments, (2) off the modern delta shores of the Lena River, and (3) off rocky shores. It was found that profiles off erosional shores had a concave shape. This shape is not well described by commonly applied power functions, a feature, which is in disagreement with the generally accepted concept of the equilibrium shape of shoreface profiles. The position of the lower shoreface boundary is determined by the elevation of the coastal lowland inundated during the last transgression (at -5 to -10 m) and may easily be recognized by a sharp, an order of magnitude decrease in the mean inclination of the sea floor. The mean shoreface inclination depends on sediment grain-size and ranges from 0.0022 to 0.033. The concave shape of the shoreface did not change substantially during the last 20-30 years, which indicates that shoreline retreat did not slow down and hence suggests continued intensive coastal erosion in the 21st century. The underwater part of the Lena River delta extends up to 35 km offshore. Its upper part is formed by a shallow and up to 18-km wide bench, which reaches depths of 2-3 m along the outer edge. The evolution of the delta was irregular. Whereas some parts of the delta are advancing rapidly (58 m/year), other parts are eroding. Comparison of measured profiles with older bathymetric data gave an opportunity to evaluate the changes of the underwater delta over past decades. Bathymetric surveys of the seabed around the delta can thus contribute towards a quantification of the sediment budget of the river-sea system. In addition, some sections of the Laptev Sea coast are composed of bedrock that has a comparatively low resistance to wave erosion. These sections may supply a considerable amount of sediment, especially if the cliffs are high. This source must therefore also be taken into account when assessing the contribution of shore erosion to the Laptev Sea sediment budget.

Geochemistry and morphometry on planktonic foraminifera

About one third of the anthropogenic carbon dioxide (CO2) released into the atmosphere in the past two centuries has been taken up by the ocean. As CO2 invades the surface ocean, carbonate ion concentrations and pH are lowered. Laboratory studies indicate that this reduces the calcification rates of marine calcifying organisms, including planktic foraminifera. Such a reduction in calcification resulting from anthropogenic CO2 emissions has not been observed, or quantified in the field yet. Here we present the findings of a study in the Western Arabian Sea that uses shells of the surface water dwelling planktic foraminifer Globigerinoides ruber in order to test the hypothesis that anthropogenically induced acidification has reduced shell calcification of this species. We found that light, thin-walled shells from the surface sediment are younger (based on 14C and d13C measurements) than the heavier, thicker-walled shells. Shells in the upper, bioturbated, sediment layer were significantly lighter compared to shells found below this layer. These observations are consistent with a scenario where anthropogenically induced ocean acidification reduced the rate at which foraminifera calcify, resulting in lighter shells. On the other hand, we show that seasonal upwelling in the area also influences their calcification and the stable isotope (d13C and d18O) signatures recorded by the foraminifera shells. Plankton tow and sediment trap data show that lighter shells were produced during upwelling and heavier ones during non-upwelling periods. Seasonality alone, however, cannot explain the 14C results, or the increase in shell weight below the bioturbated sediment layer. We therefore must conclude that probably both the processes of acidification and seasonal upwelling are responsible for the presence of light shells in the top of the sediment and the age difference between thick and thin specimens.

Atmospheric, oceanic and hydrological polar motion excitation mechanisms based on a combination of geometric and gravimetric space observations

The goal of our study is to determine accurate time series of geophysical Earth rotation excitations to learn more about global dynamic processes in the Earth system. For this purpose, we developed an adjustment model which allows to combine precise observations from space geodetic observation systems, such as Satellite Laser Ranging (SLR), Global Navigation Satellite Systems (GNSS), Very Long Baseline Interferometry (VLBI), Doppler Orbit determination and Radiopositioning Integrated on Satellite (DORIS), satellite altimetry and satellite gravimetry in order to separate geophysical excitation mechanisms of Earth rotation. Three polar motion time series are applied to derive the polar motion excitation functions (integral effect). Furthermore we use five time variable gravity field solutions from Gravity Recovery and Climate Experiment (GRACE) to determine not only the integral mass effect but also the oceanic and hydrological mass effects by applying suitable filter techniques and a land-ocean mask. For comparison the integral mass effect is also derived from degree 2 potential coefficients that are estimated from SLR observations. The oceanic mass effect is also determined from sea level anomalies observed by satellite altimetry by reducing the steric sea level anomalies derived from temperature and salinity fields of the oceans. Due to the combination of all geodetic estimated excitations the weaknesses of the individual processing strategies can be reduced and the technique-specific strengths can be accounted for. The formal errors of the adjusted geodetic solutions are smaller than the RMS differences of the geophysical model solutions. The improved excitation time series can be used to improve the geophysical modeling.

Cuttlebone morphometry measurements

Changes in seawater carbonate chemistry that accompany ongoing ocean acidification have been found to affect calcification processes in many marine invertebrates. In contrast to the response of most invertebrates, calcification rates increase in the cephalopod Sepia officials during long-term exposure to elevated seawater pCO2. The present trial investigated structural changes in the cuttlebones of S. officinalis calcified during 6 weeks of exposure to 615 Pa CO2. Cuttlebone mass increased sevenfold over the course of the growth trail, reaching a mean value of 0.71 ± 0.15 g. Depending on cuttlefish size (mantle lengths 44-56 mm), cuttlebones of CO2-incubated individuals accreted 22-55% more CaCO3 compared to controls at 64 Pa CO2. However, the height of the CO2- exposed cuttlebones was reduced. A decrease in spacing of the cuttlebone lamellae, from 384 ± 26 to 195 ± 38 lm, accounted for the height reduction The greater CaCO3 content of the CO2-incubated cuttlebones can be attributed to an increase in thickness of the lamellar and pillar walls. Particularly, pillar thickness increased from 2.6 ± 0.6 to 4.9 ± 2.2 lm. Interestingly, the incorporation of non-acidsoluble organic matrix (chitin) in the cuttlebones of CO2- exposed individuals was reduced by 30% on average. The apparent robustness of calcification processes in S. officials, and other powerful ion regulators such as decapod cructaceans, during exposure to elevated pCO2 is predicated to be closely connected to the increased extracellular [HCO3 -] maintained by these organisms to compensate extracellular pH. The potential negative impact of increased calcification in the cuttlebone of S. officials is discussed with regard to its function as a lightweight and highly porous buoyancy regulation device. Further studies working with lower seawater pCO2 values are necessary to evaluate if the observed phenomenon is of ecological relevance.

Morphometry and microphotographs of devonian stromatoporoids from southern Poland

Famennian Stromatoporoidea from the Quasiendothyra communis Foraminiferal Zone and slightly younger strata from the Debnik anticline, southern Poland, form a succession of three consecutive assemblages. Assemblages 1 and 3 consist of representatives of the order Clathrodictyida, while assemblage 2 is dominated by the order Labechiida. The clathrodictyids are represented by the genus Gerronostroma, and labechiids are represented by the genus Stylostroma. Species assigned here to the genus Gerronostroma show a network of amalgamated pillars in the central part of the columns, a feature regarded by previous authors as typical of the genus Clavidictyon. Two new species, Stylostroma multiformis sp. nov. and Gerronostroma raclaviense sp. nov., are described. Stromatoporoids from southern Poland differ from the Famennian fauna of western Europe, showing affinity to eastern European and Siberian Stromatoporoidea.