Organic geochemical studies of DSDP Leg 64 Holes

Twenty-six core samples from Leg 64, Holes 474, 474A, 477, 478, 479, and 481A in the Gulf of California, were provided by the Joint Oceanographic Institutions for Deep Earth Sampling (JOIDES) Advisory Panel on Organic Geochemistry for analysis. The high heat flow characteristic of the basin provides an opportunity to study the effect of temperature on the diagenesis of organic matter. The contents and carbon isotope compositions of the organic matter and bitumen fractions of different polarity, isoprenoid and normal alkane distributions, and the nature of tetrapyrrole pigments were studied. Relative contents of hydrocarbons and bitumens depend on the thermal history of the deposits. Among other criteria, the nature and content of tetrapyrrole pigments appear to be most sensitive to thermal stress. Whereas only chlorins are present in the immature samples, porphyrins, including VO-porphyrins, appear in the thermally altered deposits, despite the shallow burial depth. Alkane distributions in thermally changed samples are characterized by low values of phytane to 2-C18 ratios and an odd/even carbon preference index close to unity. The thermally altered samples show unusual carbon isotope distributions of the bitumen fractions. The data also provide some evidence concerning the source of the organic matter and the degree of diagenesis.

Characteristics and aldehyde concentrations of diamond dust events near Barrow, Alaska

Diamond dust (DD) refers to tiny ice crystals that form frequently in the Polar troposphere under clear sky conditions. They provide surfaces for chemical reactions and scatter light. We have measured the specific surface area (SSA) of DD at Barrow in March-April 2009. We have also measured its chemical composition in mineral and organic ions, dissolved organic carbon (DOC), aldehydes, H2O2, and the absorption spectra of water-soluble chromophores. Mercury concentrations were also measured in spring 2006, when conditions were similar. The SSA of DD ranges from 79.9 to 223 m**2/kg . The calculated ice surface area in the atmosphere reaches 11000 (±70%) µm**2/cm**3, much higher than the aerosol surface area. However, the impact of DD on the downwelling and upwelling light fluxes in the UV and visible is negligible. The composition of DD is markedly different from that of snow on the surface. Its concentrations in mineral ions are much lower, and its overall composition is acidic. Its concentrations in aldehydes, DOC, H2O2 and mercury are much higher than in surface snows. Our interpretation is that DOC from the oceanic surface microlayer, coming from open leads in the ice off of Barrow, is taken up by DD. Active chemistry in the atmosphere takes place on DD crystal surfaces, explaining its high concentrations in aldehydes and mercury. After deposition, active photochemistry modifies DD composition, as seen from the modifications in its absorption spectra and aldehyde and H2O2 content. This probably leads to the emissions of reactive species to the atmosphere.

Concentrations of carbon of dissolved and particulate total and colored organic matter in the Gulf of Riga in 1980 and 1981

Concentration, distribution, and dynamics of yellow substance were studied during 1980-1982. Colored material accounted for 17-41% of dissolved organic matter and 2-14% of suspended organic matter. A relationship of yellow substance levels with salinity is analyzed. Absorption spectra of suspended particles are studied, occurrence of yellow-colored particles in suspended phase and their distribution in the Gulf of Riga are described. Concentration of suspended yellow organic matter in the upper layer of the gulf was inversely correlated with salinity. Calculations show that 10% of terrigenous humus is flocculated in the gulf during spring.

Properties of seawater and particulate matter from a WETLabs AC-S spectrophotometer and a WETLabs chlorophyll fluorometer mounted on the continuous surface water sampling system during the Tara Oceans expedition 2009-2013

The Tara Oceans Expedition (2009-2013) was a global survey of ocean ecosystems aboard the Sailing Vessel Tara. It carried out extensive measurements of evironmental conditions and collected plankton (viruses, bacteria, protists and metazoans) for later analysis using modern sequencing and state-of-the-art imaging technologies. Tara Oceans Data are particularly suited to study the genetic, morphological and functional diversity of plankton. The present data publication provides permanent links to original and updated versions of validated data files containing measurements from the Continuous Surface Sampling System [CSSS]. Water was pumped at the front of the vessel from ~2m depth, then de-bubbled and circulated to a WETLabs AC-S spectrophotometer and a WETLabs chlorophyll fluorometer. Systems maintenance (instrument cleaning, flushing) was done approximately once a week and in port between successive legs. All data were stamped with a GPS.

SeaWiFS (version R2010.0) Monthly Global 9 km Microplankton Fraction, links to NetCDF files

Phytoplankton cell size is important to biogeochemical and food web processes. The goal of this study is to estimate phytoplankton cell size distribution from satellite imagery of spectral remote sensing reflectance (Rrs(lambda)). Previous studies have indicated phytoplankton size classes have distinctive absorption spectra despite the physiological and taxonomic variability within an assemblage. For this study, the chlorophyll specific absorption spectra for phytoplankton size class extremes, pico- and microphytoplankton, are weighted by the percent microplankton (Sfm) and are the basis of phytoplankton size retrieval from SeaWiFS imagery. Satellite retrievals of Sfm are done through implementation of a forward optical model look-up table (LUT) that incorporates the range of absorption and scattering variability due to phytoplankton size, chlorophyll concentration ([Chl]) and dissolved and detrital matter (acdm(443)) in the global ocean from which Rrs(lambda) is calculated by the radiative transfer software, Hydrolight. The Hydrolight modeled Rrs(lambda) options for a given combination of [Chl] and acdm(443) within the LUT vary only due to Sfm. For a given pixel, the LUT search space was limited by satellite imagery of [Chl] and acdm(443). Within the narrowed search space, SeaWiFS Rrs(lambda) was matched with the closest LUT Rrs(lambda) option and the associated Sfm was assigned. Thresholds at which changes in Rrs(lambda) due to Sfm could be discerned were established in terms of [Chl] and acdm(443). In situ high-precision liquid chromatography-derived estimates of cell size are used in conjunction with matched daily satellite estimates of Sfm for validation and agree well. A single month is displayed as an example of the Sfm retrieval.

The effect of a reduction of nitrogen and phosphorus to eutrophic and mesotrophic conditions towards silver nanoparticle (AgNP) on freshwater green algae species

We investigated the sensitivity of algae towards silver nanoparticles with OECD test medium and lower nutrient concentrations under standard test conditions to improve comparability and to exclude any other confounding factor aside nutrient levels. Two unicellular freshwater microalgae Desmodesmus subspicatus and Raphidocelis subcapitata were chosen due to their status as standard test organisms for the algae growth inhibition test and the response to changes in nutrient supply was compared. The original medium was used as the reference (standard). For the other four media, the amount of either nitrogen or phosphorus in the medium was lowered from half (50%) to one-fourth (25 %) of that of the OECD guideline, resulting in the following media: 50% N, 25% N, 50% P and 25% P medium. As test substance, the OECD reference material NM-300K was used. For this reason, the characterization of AgNP was done using DLS and Absorption spectra (UV/vis). Actual silver concentrations and ionic silver concentrations were measured at the highest test concentration used (100 µg Ag L-1) in R. subcapitata treatments only to reduce the number of samples. All tests were run according to the OECD guideline 201 with sterilized 50 mL cell culture flask. Each medium was tested using the test conditions for culturing with 3 replicates. Test concentrations for both algae species were 0, 25, 50 and 100 µg Ag L-1 for OECD, 50% P and 25% P while for both N reductions, the silver concentrations were 0, 10, 25 and 100 µg Ag L-1. Samples for determining the algal density were taken at every 24 h.

Colored dissolved organic matter (cDOM) absorption measurements in Antarctic lakes

The datasets present measurements of cDOM absorption of lakes located in Antarctic oasis during the summer periods from 2013 to 2016. In summer season of 2013 water samples were collected on Fildes Peninsula (King George Island, West Antarctica) - Bellingshausen Station, Russia. Investigated lakes on Fides Peninsula were completely or partly free from ice cover during water sampling. In summer seasons of 2014-2016 water samples were collected on Vestfold Hills, Reuer Island and Larsemann Hills Oasis (East Antarctica) - Progress station, Russia. During 2014-2016 summer season part of lakes on Larsemann Hills Oasis were free from ice cover, some of the lakes were completely covered by ice and were drilled before sampling. Part of the water samples from Progress Station (2015) has not been filtered. cDOM is operationally defined by the chosen filter pore size. Samples have been consistently filtrated through 0.7 µm pore size glas fibre filters. cDOM filtrates have been stored in darkness and have been measured after the expedition using the dual-beam Specord200 laboratory spectrometer (Jena Analytik) at the Otto Schmidt Laboratory OSL, Arctic and Antarctic Research Institute, St. Petersburg, Russia. The OSL cDOM protocol (Heim and Roessler, 2016) prescribes 3 Absorbance (A) measurements per sample from UV to 750 nm against ultra-pure water. The absorption coefficient, a, is calculated by a = 2.303A/L, where L is the pathlength of the cuvette [m], and the factor 2.303 converts log10 to loge. The output of the calculation is a continuous spectrum of a. The cDOM a spectra are used to determine the exponential slope value for specific wavelength ranges, S by fitting the data between min and max wavelength to an exponential function. We provide cDOM absorption coefficients for the wavelengths 254, 260, 350, 375, 400, 412, 440, 443 nm [1/m] and Slope values for three different UV, VIS, wavelength ranges: 275 to 295 nm, 350 to 400 nm, 300 to 500 nm [1/nm]. All data were carried out by scientists from Arctic and Antarctic Research Institute and Saint Petersburg State University of Russia during Russian Antarctic Expedition in 2013-2016.