Direct visualization of solute locations in laboratory ice samples, links to videos

Many important chemical reactions occur in polar snow, where solutes may be present in several reservoirs, including at the air-ice interface and in liquid-like regions within the ice matrix. Some recent laboratory studies suggest chemical reaction rates may differ in these two reservoirs. While investigations have examined where solutes are found in natural snow and ice, similar research has not identified solute locations in laboratory samples, nor the possible factors controlling solute segregation. To address this, we examined solute locations in ice samples prepared from either aqueous cesium chloride (CsCl) or Rose Bengal solutions that were frozen using several different methods. Samples frozen in a laboratory freezer had the largest liquid-like inclusions and air bubbles, while samples frozen in a custom freeze chamber had somewhat smaller air bubbles and inclusions; in contrast, samples frozen in liquid nitrogen showed much smaller concentrated inclusions and air bubbles, only slightly larger than the resolution limit of our images (~2 µm). Freezing solutions in plastic versus glass vials had significant impacts on the sample structure, perhaps because the poor heat conductivity of plastic vials changes how heat is removed from the sample as it cools. Similarly, the choice of solute had a significant impact on sample structure, with Rose Bengal solutions yielding smaller inclusions and air bubbles compared to CsCl solutions frozen using the same method. Additional experiments using higher-resolution imaging of an ice sample show that CsCl moves in a thermal gradient, supporting the idea that the solutes in ice are present in liquid-like regions. Our work shows that the structure of laboratory ice samples, including the location of solutes, is sensitive to freezing method, sample container, and solute characteristics, requiring careful experimental design and interpretation of results.

Metabolism of mesozooplankton in the North-Eastern Aegean Sea during SES_GR2 in October 2008

The dataset is based on samples taken during October 2008 in the North-Eastern Aegean Sea. NH4 excretion rate: Mesozooplankton is collected by vertical tows within the Black sea water body mass layer in the NE Aegean, using a WP-2 200 µm net equipped with a large non-filtering cod-end (10 l). Macrozooplankton organisms are removed using a 2000 µm net. A few unsorted animals (approximately 100) are placed inside 8 bottles of 350 or 650 ml filled with GF/F or 0.2 µm Nucleopore filtered seawater and then on a wheell at dim light and maintaining the in situ temperature. 4 bottles without animals are used as control. After 24hours bottles are opened and water samples taken for NH4 chemical analysis. Then the bottle content is filtered on pre-combusted preweighted CF/F filters, which are then dried at 60 C and weighted. Calculations are made as described by Ikeda et al. (2000). Samples for the NH4 determination were collected in pre-cleaned 50 ml Duran bottles and analysed onboard immediately after collection. Ammonium concentration was measured on a Perkin Elmer Lambda 25 UV/VIS Spectrometer according to the method of Koroleff (1970). PO4 excretion rate: Mesozooplankton is collected by vertical tows within the Black sea water body mass layer in the NE Aegean, using a WP-2 200 µm net equipped with a large non-filtering cod-end (10 l). Macrozooplankton organisms are removed using a 2000 µm net. A few unsorted animals (approximately 100) are placed inside 8 bottles of 350 or 650 ml filled with GF/F or 0.2 µm Nucleopore filtered seawater and then on a wheell at dim light and maintaining the in situ temperature. 4 bottles without animals are used as control. After 24hours bottles are opened and water samples taken for PO4 chemical analysis. Then the bottle content is filtered on pre-combusted preweighted CF/F filters, which are then dried at 60 C and weighted. Calculations are made as described by Ikeda et al. (2000). Samples for the determination of PO4 were collected in pre-cleaned 50 ml polyethylene volumetric tubes and analysed on board immediately after collection. PO4 concentration was measured on a Perkin Elmer Lambda 25 UV/VIS Spectrometer following the protocol of Murphy and Riley (1962). O2 consumption rate: Mesozooplankton is collected by vertical tows within the Black sea water body mass layer in the NE Aegean, using a WP-2 200 µm net equipped with a large non-filtering cod-end (10 l). Macrozooplankton organisms are removed using a 2000 µm net. A few unsorted animals (approximately 100) are placed inside 8 bottles of 350 or 650 ml filled with GF/F or 0.2 µm Nucleopore filtered seawater and then on a wheell at dim light and maintaining the in situ temperature. 4 bottles without animals are used as control. After 24hours bottles are opened and water samples taken for O2 chemical analysis. Then the bottle content is filtered on pre-combusted preweighted CF/F filters, which are then dried at 60 C and weighted. Calculations are made as described by Ikeda et al. (2000). For the dissolved O2 determination, the samples were fixed immediately after collection and analysed with the Winkler method as modified by Carpenter (1965a and 1965b). Carbon specific CO2 respiration rate: O2 consumption rate was converted to CO2 production using a RQ value of 0.87 (Mayzaud et al. 2005). Conversion of mesozooplankton dry weight to carbon was done using the % of carbon content measured in the same station from the SESAME dataset of zooplankton biomass. Carbon specific NH4 excretion rate: Conversion of mesozooplankton dry weight to carbon was done using the % of carbon content measured in the same station from the SESAME dataset of zooplankton biomass. Carbon specific PO4 excretion rate: Conversion of mesozooplankton dry weight to carbon was done using the % of carbon content measured in the same station from the SESAME dataset of zooplankton biomass.

Benthic foraminifera extinctions in the Cenozoic record

In the late Pliocene-middle Pleistocene a group of 95 species of elongate, cylindrical, deep-sea (lower bathyal-abyssal) benthic foraminifera became extinct. This Extinction Group (Ext. Gp), belonging to three families (all the Stilostomellidae and Pleurostomellidae, some of the Nodosariidae), was a major component (20-70%) of deep-sea foraminiferal assemblages in the middle Cenozoic and subsequently declined in abundance and species richness before finally disappearing almost completely during the mid-Pleistocene Climatic Transition (MPT). So what caused these declines and extinction? In this study 127 Ext. Gp species are identified from eight Cenozoic bathyal and abyssal sequences in the North Atlantic and equatorial Pacific Oceans. Most species are long-ranging with 80% originating in the Eocene or earlier. The greatest abundance and diversity of the Ext. Gp was in the warm oceanic conditions of the middle Eocene-early Oligocene. The group was subjected to significant changes in the composition of the faunal dominants and slightly enhanced species turnover during and soon after the rapid Eocene-Oligocene cooling event. Declines in the relative abundance and flux of the Ext. Gp, together with enhanced species loss, occurred during middle-late Miocene cooling, particularly at abyssal sites. The overall number of Ext. Gp species present began declining earlier at mid abyssal depths (in middle Miocene) than at upper abyssal (in late Pliocene-early Pleistocene) and then lower bathyal depths (in MPT). By far the most significant Ext. Gp declines in abundance and species loss occurred during the more severe glacial stages of the late Pliocene-middle Pleistocene. Clearly, the decline and extinction of this group of deep-sea foraminifera was related to the function of their specialized apertures and the stepwise cooling of global climate and deep water. We infer that the apertural modifications may be related to the method of food collection or processing, and that the extinctions may have resulted from the decline or loss of their specific phytoplankton or prokaryote food source, that was more directly impacted than the foraminifera by the cooling temperatures.

Sedimentology on profiles from Lake Prespa, Greece

Hydro-acoustic surveys and coring campaigns at Lake Prespa were carried out between 2007 and 2009. This paper presents hydro-acoustic profiles and provide lithological and chronostratigraphical information from three up to 15.75 m long sediment sequences from the Macedonian side of the lake. The sediment sequences comprise glacial and interglacial sediments likely deposited from the end of Marine Isotope Stage (MIS) 5 to present day. The information implies a distinct change of sedimentation patterns at the Pleistocene/Holocene transition and the establishment of a relatively strong Holocene current system and deposition of channel-related contourite drift in Lake Prespa. Potential causes for the establishment of this current during the Holocene include significant lake level change, reduced winter ice cover, and/or higher aeolian activity.

Physical properties and age determination of sediment cores from the Hinlopen/Yermak Megaslide north of Spitsbergen, Arctic Ocean

Integrated interpretation of multi-beam bathymetric, sediment-penetrating acoustic (PARASOUND) and seismic data show a multiple slope failure on the northern European continental margin, north of Spitsbergen. The first slide event occurred during MIS 3 around 30 cal. ka BP and was characterised by highly dynamic and rapid evacuation of ca. 1250 km**3 of sediment from the lower to the upper part of the continental slope. During this event, headwalls up to 1600 m high were created and ca. 1150 km**3 material from hemi-pelagic sediments and from the lower pre-existing trough mouth fan has been entrained and transported into the semi-enclosed Sophia Basin. This megaslide event was followed by a secondary evacuation of material to the Nansen Basin by funnelling of the debris through the channel between Polarstern Seamount and the adjacent continental slope. The main slide debris is overlain by a set of fining-upward sequences as evidence for the associated suspension cloud and following minor failure events. Subsequent adjustment of the eastern headwalls led to failure of rather soft sediments and creation of smaller debris flows that followed the main slide surficial topography. Discharge of the Hinlopen ice stream during the Last Glacial Maximum and the following deglaciation draped the central headwalls and created a fan deposit of glacigenic debris flows.

Microbial community composition in sediments of the Hydrate Ridge (Cascadian Margin) collected during RV SONNE cruises SO143 (1999) and SO148-1 (2000)

Cold seep environments such as sediments above outcropping hydrate at Hydrate Ridge (Cascadia margin off Oregon) are characterized by methane venting, high sulfide fluxes caused by the anaerobic oxidation of methane, and the presence of chemosynthetic communities. This investigation deals with the diversity and distribution of sulfate-reducing bacteria, some of which are directly involved in the anaerobic oxidation of methane as syntrophic partners of the methanotrophic archaea. The composition and activity of the microbial communities at methane vented and nonvented sediments are compared by quantitative methods including total cell counts, fluorescence in situ hybridization (FISH). Bacteria involved in the degradation of particulate organic carbon (POC) are as active and diverse as at other productive margin sites of similar water depths. The availability of methane supports a two orders of magnitude higher microbial biomass (up to 9.6×10**10cells/cm**3). Sediment samples were obtained during RV SONNE cruises SO143-2 and SO148-1 at the crest of southern Hydrate Ridge at the Cascadia convergent margin off the coast of Oregon. Sediment cores of 20 - 40 cm length were obtained using a video-guided multiple corer from gas hydrate bearing sediments and from reference sites not enriched in methane in the surface sediments. Samples for total cell counts were obtained from 1 cm core slices, fixed with 2% formaldehyde and stored cold (4°C) and the quantification of aggregates was done via epifluorescence microscopy after staining the sediments with Acridine Orange Direct Counts (AODC) according to the method of Meyer- Reil (1983, doi:10.1007/BF00395813). Total cell counts were defined as the sum of single cells plus the aggregated cells in the syntrophic consortia. DAPI staining was used to measure ANME2/DSS aggregate sizes via epifluorescence microscopy of FISH-treated samples. For FISH, subsamples of sediment cores were sliced into 1 cm intervals and fixed for 2-3 h with 3% formaldehyde (final concentration), washed twice with 1×PBS (10 mM sodium phosphate; 130 mM NaCl), and finally stored in 1×PBS/EtOH (1:1) at -20°C.