Whole transcriptome analysis of the coral Acropora millepora reveals complex responses to CO2-driven acidification during the initiation of calcification

The impact of ocean acidification (OA) on coral calcification, a subject of intense current interest, is poorly understood in part because of the presence of symbionts in adult corals. Early life history stages of Acropora spp. provide an opportunity to study the effects of elevated CO(2) on coral calcification without the complication of symbiont metabolism. Therefore, we used the Illumina RNAseq approach to study the effects of acute exposure to elevated CO(2) on gene expression in primary polyps of Acropora millepora, using as reference a novel comprehensive transcriptome assembly developed for this study. Gene ontology analysis of this whole transcriptome data set indicated that CO(2) -driven acidification strongly suppressed metabolism but enhanced extracellular organic matrix synthesis, whereas targeted analyses revealed complex effects on genes implicated in calcification. Unexpectedly, expression of most ion transport proteins was unaffected, while many membrane-associated or secreted carbonic anhydrases were expressed at lower levels. The most dramatic effect of CO(2) -driven acidification, however, was on genes encoding candidate and known components of the skeletal organic matrix that controls CaCO(3) deposition. The skeletal organic matrix effects included elevated expression of adult-type galaxins and some secreted acidic proteins, but down-regulation of other galaxins, secreted acidic proteins, SCRiPs and other coral-specific genes, suggesting specialized roles for the members of these protein families and complex impacts of OA on mineral deposition. This study is the first exhaustive exploration of the transcriptomic response of a scleractinian coral to acidification and provides an unbiased perspective on its effects during the early stages of calcification.

Ages analysis, trace elements and relative frequencies of foraminifera snd diatoms from sediment cores AvH248260-2 and AvH248260-1, Ameralik Fjord, SW Greenland

A multiproxy record including benthic foraminifera, diatoms and XRF data of a marine sediment core from a SW Greenland fjord provides a detailed reconstruction of the oceanographic and climatic variations of the region during the last 4400 cal. years. The lower part of our record represents the final termination of the Holocene Thermal Maximum. After the onset of the 'Neoglaciation' at approximately 3.2 ka cal. BP, the fjord system was subject to a number of marked hydrographical changes that were closely linked to the general climatic and oceanographic development of the Labrador Sea and the North Atlantic region. Our data show that increased advection of Atlantic water (Irminger Sea Water) from the West Greenland Current into the Labrador Sea was a typical feature of Northeast Atlantic cooling episodes such as the 'Little Ice Age' and the 'European Dark Ages', while the advection of Irminger Sea Water decreased significantly during warm episodes such as the 'Mediaeval Warm Period' and the 'Roman Warm Period'.Whereas the 'Mediaeval Warm Period' was characterized by relatively cool climate as suggested by low meltwater production, the preceding 'Dark Ages' display higher meltwater runoff and consequently warmer climate. When compared with European climate, these regional climate anomalies indicate persisting patterns of advection of colder, respectively warmer air masses in the study region during these periods and thus a long-term seesaw climate pattern between West Greenland and Europe.