The ManTIS Field Spectro-Goniometer Movie - Presentation of the Instrument and Measurement Scheme

This article presents and technically describes a new field spectro-goniometer system for the ground-based characterization of the surface reflectance anisotropy under natural illumination conditions developed at the Alfred Wegener Institute (AWI). The spectro-goniometer consists of a Manual Transportable Instrument platform for ground-based Spectro-directional observations (ManTIS), and a hyperspectral sensor system. The presented measurement strategy shows that the AWI ManTIS field spectro-goniometer can deliver high quality hemispherical conical reflectance factor (HCRF) measurements with a pointing accuracy of ±6 cm within the constant observation center. The sampling of a ManTIS hemisphere (up to 30° viewing zenith, 360° viewing azimuth) needs approx. 18 min. The developed data processing chain in combination with the software used for the semi-automatic control provides a reliable method to reduce temporal effects during the measurements. The presented visualization and analysis approaches of the HCRF data of an Arctic low growing vegetation showcase prove the high quality of spectro-goniometer measurements. The patented low-cost and lightweight ManTIS instrument platform can be customized for various research needs and is available for purchase.

Time series of ZOOSCAN images and results of zooplankton samples at Villefranche from 1966 to 2003

ZooScan with ZooProcess and Plankton Identifier (PkID) software is an integrated analysis system for acquisition and classification of digital zooplankton images from preserved zooplankton samples. Zooplankton samples are digitized by the ZooScan and processed by ZooProcess and PkID in order to detect, enumerate, measure and classify the digitized objects. Here we present a semi-automatic approach that entails automated classification of images followed by manual validation, which allows rapid and accurate classification of zooplankton and abiotic objects. We demonstrate this approach with a biweekly zooplankton time series from the Bay of Villefranche-sur-mer, France. The classification approach proposed here provides a practical compromise between a fully automatic method with varying degrees of bias and a manual but accurate classification of zooplankton. We also evaluate the appropriate number of images to include in digital learning sets and compare the accuracy of six classification algorithms. We evaluate the accuracy of the ZooScan for automated measurements of body size and present relationships between machine measures of size and C and N content of selected zooplankton taxa. We demonstrate that the ZooScan system can produce useful measures of zooplankton abundance, biomass and size spectra, for a variety of ecological studies.

AWI Bathymetric Chart of the Weddell Sea, Antarctica (BCWS)

From data collected by RV Polarstern, and additional echosoundings provided by national hydrographic offices, research institutions and the International Hydrographic Organization (IHO) Digital Bathymetric Data Center, the 1:1,000,000 Bathymetric Chart of the Weddell Sea (AWl BCWS) series has been developed. The heterogeneity of bathymetric data and the lack of observations within ice-covered areas required the incorporation of supplementary geophysical and geographical information. A semi-automatic procedure was developed for terrain modeling and contouring. In coastal regions, adjacent sub-glacial information was included in order to model the bathymetry of the transition zone along the Antarctic ice edge. Six sheets of the AWl BCWS series in the scale of 1:1,000,000 covering the southern Weddell Sea from 66°S to 78°S and from 68°W to 0°E were recently completed and included in the 1997 GEneral Bathymetric Chart of the Oceans (GEBCO) Digital Atlas CD-ROM (http://www.gebco.net). On the basis of these six 1:1,000,000 AWl BCWS sheets, a generalized 1:3,000,000-scale bathymetric chart was compiled for the entire southern Weddell Sea.

Effective acoustical monitoring tools for Mannophryne lamarcai

We performed the field-work during the dry (March 2014) and reainy season (May and June 2014) at the species type locality: Cerro Socopó, located at central-west region between Falcón, Lara and Zulia states, Venezuela. Socopó is a small and isolated mountain (1.571 m) belonging to the Ziruma mountains, and represents a relict of tropical mountain forest surrounded by semi-arid vegetation and grassland. This area is home to 312 species of vertebrates, including endangered and endemic amphibians species like Mannophryne lamarcai, Leptodactylus magistris and Dendropsophus amicorum. These forest and species are severely threatened by cattle ranch and illegal timber extraction, with forest formations only above 1000 meters. Despite this, no legal protected figure has been established in the area. We identified a 2.5 km secondary road transect within the study area based on the following criteria: 1) it cover different habitat types (streams and lagoons); and 2) it within the altitudinal gradient described for the specie (1,040 to 1,363 m). We identified three sampling points throughout the transect located in the vicinity of wetland habits: socopo1, socopo2 and socopo4. We did two types of recordings: 1) high quality recordings to characterize the advertisement call for M. lamarcai, non described to date (socopo4), and 2) recordings in different sampling points to evaluate call detectors performance in different acoustic scenarios (in all three localities).