Data base on heterotrophic dinoflagellates grazing and growth rate as a function of size, prey size and type compiled from the literature

Microzooplankton (the 20 to 200 µm size class of zooplankton) is recognised as an important part of marine pelagic ecosystems. In terms of biomass and abundance heterotrophic dinoflagellates are one of the important groups of organism in microzooplankton. However, their rates - grazing and growth - , feeding behaviour and prey preferences are poorly known and understood. A set of data was assembled in order to derive a better understanding of heterotrophic dinoflagellates rates, in response to parameters such as prey concentration, prey type (size and species), temperature and their own size. With these objectives, literature was searched for laboratory experiments with information on one or more of these parameters effect studied. The criteria for selection and inclusion in the database included: (i) controlled laboratory experiment with a known dinoflagellate feeding on a known prey; (ii) presence of ancillary information about experimental conditions, used organisms - cell volume, cell dimensions, and carbon content. Rates and ancillary information were measured in units that meet the experimenter need, creating a need to harmonize the data units after collection. In addition different units can link to different mechanisms (carbon to nutritive quality of the prey, volume to size limits). As a result, grazing rates are thus available as pg C dinoflagellate-1 h-1, µm3 dinoflagellate-1 h-1 and prey cell dinoflagellate-1 h-1; clearance rate was calculated if not given and growth rate is expressed as the growth rate per day.

Response of the calcifying coccolithophore Emiliania huxleyi to low pH/high pCO2: from physiology to molecular level, 2011

The emergence of ocean acidification as a significant threat to calcifying organisms in marine ecosystems creates a pressing need to understand the physiological and molecular mechanisms by which calcification is affected by environmental parameters. We report here, for the first time, changes in gene expression induced by variations in pH/pCO2 in the widespread and abundant coccolithophore Emiliania huxleyi. Batch cultures were subjected to increased partial pressure of CO2 (pCO2; i.e. decreased pH), and the changes in expression of four functional gene classes directly or indirectly related to calcification were investigated. Increased pCO2 did not affect the calcification rate and only carbonic anhydrase transcripts exhibited a significant down-regulation. Our observation that elevated pCO2 induces only limited changes in the transcription of several transporters of calcium and bicarbonate gives new significant elements to understand cellular mechanisms underlying the early response of E. huxleyi to CO2-driven ocean acidification.

Physical water column observations during summer breeze winds

During summer seasons (from 2012 to 2015) high resolution observation were performed in the Civitavecchia coastal area (Northern Tyrrhenian sea, west coast). All sampling was carried out from a small boat (5m rigid inflatable) starting in the early morning typically around 06:00 a.m. , and lasting from 2 to 8 h, depending on the weather conditions. The purposes of the experiment was to observe the variations of both the coastal circulation and the water column in response to rotation of 180 ° in the wind direction. During surveys both current measurements and yo-yo time series were performed. Current data were acquired using an ADCP SonTeck (500 Khz, sampling interval from 20sec to 60 sec, average interval 50% sampling, cell thickness 1 meter) and the yo-yo time series employing a small instrument package (CTD). The CTD contained an Idronaut 316 Plus and a SeaPoint fluorometer. The sampling rate for the CTD was 10Hz, profiling with the CTD was done by allowing the instrument package to free-fall, at an average descent rate of 1 m/s. During the summer 2012, the sampling plan consisted in four stations spaced a quarter of a mile (St. 1 - 10 m; St. 2 - 20 m; St. 3 - 30 m; and St. 4 - 40 m), in which yo-yo time series were performed with an interval of 20 min. In order to study fluorescence of Chlorophyll a pathes distribution in coastal zone. Breeze induced circulation was the goal of the following summers surveys, in these current measurements and yo-yo time series were performed moored at a depth of 40 m. Offshore station (St. 1 -40m) has been chosen to perform measurement, basis of previously observations (2012 sampling surveys). It was decided as wind driven circulation and mixing phenomena are less influenced by seabed than the other stations. Acquired data have been processed by NEMO SeaDataNet software.