Microsatellite genotyping of Mediterranean population of Ircinia fasciculata and Ircinia variabilis

Recent episodes of mass mortalities in the Mediterranean Sea have been reported for the closely related marine sponges Ircinia fasciculata and I. variabilis, which live in sympatry. In this context, the assessment of the genetic diversity, bottlenecks and connectivity of these sponges has become urgent in order to evaluate the potential effects of mass mortalities on their latitudinal range. Our study aims to establish 1.) the genetic structure, connectivity, and signs of bottlenecks across the populations of I. fasciculata, and 2.) the hybridization levels between I. fasciculata and I. variabilis. To accomplish the first objective, 194 individuals of I. fasciculata from 12 locations across the Mediterranean were genotyped at 14 microsatellite loci. For the second objective, mitochondrial cytochrome c oxidase subunit I sequences of 16 individuals from both species were analyzed along with genotypes at 12 microsatellite loci of 40 individuals coexisting in 3 Mediterranean populations. We detected strong genetic structure along the Mediterranean for I. fasciculata, with high levels of inbreeding in all locations and bottleneck signs in most locations. Oceanographic barriers like the Almeria-Oran front, North-Balearic front, and the Ligurian-Thyrrenian barrier seem to be impeding gene flow for I. fasciculata, adding population divergence to the pattern of isolation by distance derived from the low dispersal abilities of sponge larvae. Hybridization between both species occurred in some populations, which might be increasing genetic diversity and somewhat palliating the genetic loss caused by population decimation in I. fasciculata

Investigation of Quaternary diatoms in sediment core CRP-1 from the Ross Sea, Antarctica

In the first season of drilling, the Cape Roberts Project (CRP) recovered one drillcore (CRP-l) from Roberts Ridge in western McMurdo Sound, Ross Sea, Antarctica Diatom biostratigraphy places the upper six lithostratigraphic units (Units 1.1, 2.1, 2.2, 2.3, 3.1, and 4.1) of CRP-l (0.0 to 43.15 mbsf) within the Quaternary. Both non-marine and marine Quaternary diatoms occur in variable abundance in the Quaternary interval of CRP- 1 Biostratigraphic data resolve two Quaternary time slices or events within CRP-1. Marine diatom assemblages in Units 4.1 and 3.1 represent sedimentation within the diatom Actinocyclus ingens Zone (1.35 to 0.66 Ma). Further refinement of the age of Unit 3.l places deposition in the interval 1.15 to 0.75 Ma based on the common occurrence of Thalassiosira elliptipora and correlation to the Southern Ocean acme of this taxon The absence of ActiActinocyclus ingens and the presence ot Thalassiosira antarctica in Unit 2.2 require a younger zonal assignment for this interval, within the diatom Thalassiosira lentiginosa Zone (0.66 to 0.0 Ma). A new diatom species. Rouxia leventerae, is described from marine assemblages of Units 2.2, 2.3, 3.1, and 4.l. Lithostratigraphic Unit 3.1 (33.82 to 31.89 mbsf) is a bryozoan-dominated skeletal-carbonate facies. Low abundance of Fragilariopsis curta and Fragilariopsis cylindrus within this unit combined with the relatively high abundance of species associated with open water indicates deposition in waters that remained ice free for much or all of the year Diatom assemblages suggest carbonate deposition in Unit 3.1 is linked to a significant early Pleistocene event in McMurdo Sound, when elevated surface-water temperatures inhibited the formation of sea ice.

Relative abundance and ranges of selected diatoms from Pliocene-Pleistocene sections of ODP Leg 177, Atlantic sector of the Southern Ocean

During Ocean Drilling Program (ODP) Leg 177, seven sites were drilled aligned on a transect across the Antarctic Circumpolar Current in the Atlantic sector of the Southern Ocean. The primary scientific objective of Leg 177 was the study of the Cenozoic paleoceanographic and paleoclimatic history of the southern high latitudes and its relationship with the Antarctic cryosphere development. Of special emphasis was the recovery of Pliocene-Pleistocene sections, allowing paleoceanographic studies at millennial or higher time resolution, and the establishment of refined biostratigraphic zonations tied to the geomagnetic polarity record and stable isotope records. At most sites, multiple holes were drilled to ensure complete recovery of the section. A description of the recovered sections and the construction of a multihole splice for the establishment of a continuous composite is presented in the Leg 177 Initial Reports volume for each of the sites (Gersonde, Hodell, Blum, et al., 1999). Here we present the relative abundance pattern and the stratigraphic ranges of diatom taxa encountered from shore-based light microscope studies completed on the Pliocene-Pleistocene sequences from six of the drilled sites (Sites 1089-1094). No shore-based diatom studies have been conducted on the Pliocene-Pleistocene sediments obtained at Site 1088, located on the northern crest of the Agulhas Ridge, because of the scattered occurrence and poor preservation of diatoms in these sections (Shipboard Scientific Party, 1999b). The data included in our report present the baseline of a diatom biostratigraphic study of Zielinski and Gersonde (2002), which (1) includes a refinement of the southern high-latitude Pliocene-Pleistocene diatom zonation, in particular for the middle and late Pleistocene, and (2) presents a biostratigraphic framework for the establishment of age models of the recovered sediment sections. Zielinski and Gersonde (2002) correlated the diatom ranges with the geomagnetic polarity record established shipboard (Sites 1090 and 1092) (Shipboard Scientific Party, 1999c, 1999d) and on shore (Sites 1089, 1091, 1093, and 1094) by Channell and Stoner (2002). The Pliocene-Pleistocene diatom zonation proposed by Zielinski and Gersonde (2002) relies on a diatom zonation from Gersonde and Bárcena (1998) for the northern belt of the Southern Ocean. Because of latitudinal differentiation of sea-surface temperature, nutrients, and salinity between Antarctic and Subantarctic/subtropical water masses, the Pliocene-Pleistocene stratigraphic marker diatoms are not uniformly distributed in the Southern Ocean (Fenner, 1991; Gersonde and Bárcena, 1998). As a consequence, Zielinski and Gersonde (2002) propose two diatom zonations for application in the Antarctic Zone south of the Polar Front (Southern Zonation, Sites 1094 and 1093) and the area encompassing the Polar Front Zone (PFZ) and the Subantarctic Zone (Northern Zonation, Sites 1089-1092). This accounts especially for the Pleistocene zonation where Hemidiscus karstenii, whose first abundant occurrence datum and last occurrence datum defines the subzonation of the northern Thalassiosira lentiginosa Zone, occurs only sporadically in the cold-water realm south of the PFZ and thus is not applicable in sections from this area. However, newly established marker species assigned to the genus Rouxia (Rouxia leventerae and Rouxia constricta) are more related to cold-water environments and allow a refinement of the Pleistocene stratigraphic zonation for the southern cold areas. A study relying on quantitative counts of both Rouxia species confirms the utility of these stratigraphic markers for the identification of sequences attributed to marine isotope Stages 6 and 8 in the southern Southern Ocean (Zielinski et al., 2002).

Phytoplankton parameters in the Large Aral Sea in June 2008

Species composition, abundance, and biomass of phytoplankton in the surface water layer were determined at 10 stations in the central part of the Western Basin (WB) and at one station in the Eastern Basin (EB) of the Large Aral Sea. 42 algal species were found. Diatoms had the highest number of species. Similarity of phytoplankton composition in the WB was high, whereas phytoplankton composition in the WB and EB differed significantly. In WB abundance and biomass of phytoplankton varied from 826x10**3 to 6312x10**3 cells/l (aver. 1877x10**3 cells/l) and from 53 to 241 ?g C/l (aver. 95 ?g C/l). In EB the phytoplankton abundance was 915x10**3 cells/l and 93 ?g C/l. Vertical distribution of phytoplankton in upper 35 m was investigated at one station in WB. Maximum values of phytoplankton abundance and biomass were recorded under the thermocline at 20 m depth. Integrated biomass of phytoplankton was 14 g C/m**2.

Neogene diatoms from the western Antarctic Peninsula

During Ocean Drilling Program Leg 178 we cored nine sites on the continental rise (Sites 1095, 1096, and 1101), continental shelf (Sites 1097, 1100, 1102, and 1103), and in an inner shelf basin, Palmer Deep (Sites 1098 and 1099), along the Pacific margin of the Antarctic Peninsula. Fossil diatoms are a key group that provides age constraint for these shelf site sediments to allow reconstruction of Antarctic Peninsula glacial history. This paper provides the systematic paleontology of diatoms applied in biostratigraphic and paleoceanographic studies and includes a total of 33 plates. Taxonomic confusion in previous reports, including biostratigraphically useful species such as Thalassiosira inura and Thalassiosira complicata, is discussed. These systematics and taxonomic discussions help to provide a reference for Neogene diatoms in the Southern Ocean.

Diatom biostratigraphy of sediments from the Kerguelen Plateau, Southern Ocean

The biostratigraphic distribution and abundance of lower Oligocene to Pleistocene diatoms is documented from Holes 747A, 747B, 748B, 749B, and 751A drilled during Ocean Drilling Program Leg 120 on the Kerguelen Plateau in the southeast Indian Ocean. The occurrence of middle and upper Eocene diatoms is also documented, but these are rare and occur in discrete intervals. The recovery of several Oligocene to Pleistocene sections with minimal coring gaps, relatively good magnetostratigraphic signatures, and mixed assemblages of both calcareous and siliceous microfossils makes the above four Leg 120 sites important biostratigraphic reference sections for the Southern Ocean and Antarctic continent. A high-resolution diatom zonation divides the last 36 m.y. into 45 zones and subzones. This zonation is built upon an existing biostratigraphic framework developed over the past 20 yr of Southern Ocean/Antarctic deep-sea coring and drilling. After the recent advances from diatom biostratigraphic studies on sediments from Legs 113, 114, 119, and 120, a zonal framework for the Southern Ocean is beginning to stabilize. The potential age resolution afforded by the high-diversity diatom assemblages in this region ranks among the highest of all fossil groups. In addition to the 46 datum levels that define the diatom zones and subzones, the approximate stratigraphic level, age, and magnetic anomaly correlative of more than 150 other diatom datums are determined or estimated. These total 73 datum levels for the Pliocene-Pleistocene, 67 for the Miocene, and 45 for the Oligocene. Greater stratigraphic resolution is possible as the less common and poorly documented species become better known. This high-resolution diatom stratigraphy, combined with good to moderately good magnetostratigraphic control, led to the recognition of more than 10 intervals where hiatuses dissect the Oligocene-Pleistocene section on the Kerguelen Plateau. We propose 12 new diatom taxa and 6 new combination

Diatom abundance in ODP Leg 178 holes

This paper documents the biostratigraphic distribution and abundance of diatoms from sites drilled during Ocean Drilling Program Leg 178, off the Pacific margin of the Antarctic Peninsula. Drift sediments cored on the continental rise at Sites 1095, 1096, and 1101 have good recovery and a well-defined paleomagnetic record. Well-preserved diatoms are present throughout the upper Miocene to middle Pliocene and in the upper Quaternary section of these sites. The stratigraphic occurrence of diatom species through these intervals defines numerous datum levels. Diatom events are given absolute age estimates through direct correlation to the established paleomagnetic stratigraphy of Sites 1095, 1096, and 1101. Leg 178 diatom biostratigraphic results enable the development of a regional stratigraphic framework for the Pacific sector of the Southern Ocean and record the interaction of open-ocean and shelf-margin diatom floras.

Distribution of diatoms in surface sediments and some limnological characteristics of studied lakes in the Siberian arctic

The investigation of the species composition and ecology of diatoms of modern bottom sediments in water bodies of arctic polygonal tundra in three subregions of North Yakutiya has been carried out. As a result, 161 taxons of diatoms were determined; the determinant role of the depth, conductivity, pH of the water, and geographic latitude in their distribution was confirmed, and two complexes of species with respect to the leading abiotic factors were distinguished. The diatoms of the first complex prefer shallow water bodies of high latitudes with neutral and slightly alkaline water and relatively high conductivity. The second complex is confined to the water bodies of lower latitudes with small conductivity, as well as neutral and slightly acidic water.

Diatom deposits in the ostpreußischen Haffe

Als man nach dem ersten Weltkrieg im verkleinerten Deutschland nach der Möglichkeit von Neulandgewinnung suchte, dachte man auch an eineTrockenlegung der ostpreußischen Haffe. Aus diesem Anlaß wurden umfangreiche Bohrungen ausgeführt, um ein möglichst genaues Bild vom Untergrunde der Haffe zu bekommen. Auf Veranlassung der Preußischen Geologischen Landesanstalt wurde ich mit der Untersuchung der Diatomeen in den Bohrproben beauftragt. Die Arbeit wurde 1934 begonnen und Ende 1937 wurde der letzte Arbeitsbericht abgeliefert. Die beabsichtigte Veröffentlichung ist bisher unterblieben, weil die Druckvorlagen später verloren gegangen sind. Seitdem sind über die Haffuntersuchungen mehrere Teilergebnisse veröffentlicht worden, von denen hier schon wegen der Terminologie die pollenanalytischen Arbeiten von L. HEIN (1941) und HUGO GROSS (1941) erwähnt seien, auf die im Abschnitt Il 2e näher eingegangen wird. Bei der geologischen Auswertung war Zurückhaltung geboten; denn es wäre gewagt, allein aus der Perspektive der Diatomeenforschung endgültige Aussagen machen zu wollen. Darum habe ich mich bemüht, das Material so weit aufzuschließen, daß es Geologen später auch bei veränderter Fragestellung auswerten können. "Die Theorien wechseln, aber die Tatsachen bleiben." Der Initiative des Herrn Prof. Dr. K. GRIPP und der finanziellen Hilfe der Deutschen Forschungsgemeinschaft ist es zu verdanken, daß die vorliegende Arbeit im Druck erscheinen kann. Zusammenfassung 1. Nur in den alluvialen Schichten des Kurischen Haffs wurden Diatomeen gefunden. 2. Die Diatomeenflora des Kurischen Haffs besteht zur Hauptsache aus Süßwasserformen. 3. Salzwasserformen finden sich in allen Schichten verstreut unter der Süßwasserflora. Wenn sie auch nach Zahl der Arten in manchen Proben einen erheblichen Prozentsatz der Flora ausmachen, so ist doch die Zahl der Individuen stets so gering, daß man nirgends von einer Brackwasserflora sprechen kann. 4. Die Süßwasserflora besteht in den unteren Schichten vorwiegend aus Grundformen; und zwar machen die epiphytischen Bewohner flacher Sumpfgewässer einen großen Teil der Flora aus. 5. In einzelnen Bohrungen kommt in den untersten alluvialen Schichten eine Grundflora mit zahlreichen Mastogloien vor. Dies sind die ältesten diatomeenführenden Schichten, entstanden in isolierten Sumpfgewässern. 6. Die übrigen Schichten mit überwiegender Grundflora sind vermutlich Ablagerungen der Ancyluszeit. 7. Die oberen Schichten, in denen die Planktondiatomeen überwiegen, dürften größtenteils der Litorina-Transgressionszeit angehören, jedoch ist der Transgressions-Kontakt nicht klar zu erkennen. 8. Das Ende der Litorinazeit ist noch weniger erkennbar, da eine grundsätzliche Veränderung der Flora nach oben nicht zu beobachten ist. 9. Die ostbaltischen Charakterformen sind in allen Schichten vertreten.

Pollen and diatom analysis on varved sediments in Lake Jues (Harz Mountains, Germany)

Studies combining sedimentological and biological evidence to reconstruct Holocene climate beyond the major changes, and especially seasonality, are rare in Europe, and are nearly completely absent in Germany. The present study tries to reconstruct changes of seasonality from evidence of annual algal successions within the framework of well-established pollen zonation and 14C-AMS dates from terrestrial plants. Laminated Holocene sediments in Lake Jues (10°20.70' E, 51°39.30' N, 241 m a.s.l.), located at the SW margin of the Harz Mountains, central Germany, were studied for sediment characteristics, pollen, diatoms and coccal green algae. An age model is based on 21 calibrated AMS radiocarbon dates from terrestrial plants. The sedimentary record covers the entire Holocene period. Trophic status and circulation/stagnation patterns of the lake were inferred from algal assemblages, the subannual structure of varves and the physico-chemical properties of the sediment. During the Holocene, mixing conditions alternated between di-, oligo- and meromictic depending on length and variability of spring and fall periods, and the stability of winter and summer weather. The trophic state was controlled by nutrient input, circulation patterns and the temperature-dependent rates of organic production and mineralization. Climate shifts, mainly in phase with those recorded from other European regions, are inferred from changing limnological conditions and terrestrial vegetation. Significant changes occurred at 11,600 cal. yr. BP (Preboreal warming), between 10,600 and 10,100 cal. yr. BP (Boreal cooling), and between 8,400 and 4,550 cal. yr. BP (warm and dry interval of the Atlantic). Since 4,550 cal. yr. BP the climate became gradually cooler, wetter and more oceanic. This trend was interrupted by warmer and dryer phases between 3,440 and 2,850 cal. yr. BP and, likely, between 2,500 and 2,250 cal. yr. BP.

Diatom biostratigraphy, Argon ages and chronology of ODP Hole 183-1138A

A thick Neogene section was recovered in the upper ~300 m of Ocean Drilling Program Hole 1138A, drilled on the Central Kerguelen Plateau in the Indian sector of the Southern Ocean. Sediment lithologies consist primarily of mixed carbonate and biosiliceous clays and oozes, with several thin (1-3 cm) tephra horizons. The tephras are glass rich, well sorted, and dominantly trachytic to rhyolitic in composition. Volcaniclastic material in these horizons is interpreted to have originated from Heard Island, 180 km northwest of Site 1138, and was likely emplaced through both primary ash fall and turbiditic, submarine flows. A Neogene age-depth model for Hole 1138A is constructed primarily from 36 diatom biostratigraphic datums. Nannofossil and planktonic foraminifer biostratigraphy provides supporting age information. Additionally, four high-precision 40Ar-39Ar ages are derived from ash and tephra horizons, and these radiometric ages are in close agreement with the biostratigraphic ages. The integrated age-depth model reveals a reasonably complete lower Miocene to upper Pleistocene section in Hole 1138A, with the exception of a ~1-m.y. hiatus at the Miocene/Pliocene boundary. Another possible hiatus is also identified at the Oligocene/Miocene boundary. High Neogene sedimentation rates and the presence of both calcareous and siliceous microfossils, combined with datable tephra horizons, establish Site 1138 as a suitable target for future drilling legs with paleoceanographic objectives. This report also proposes two new diatom species, Fragilariopsis heardensis and Azpeitia harwoodii, from Pliocene strata of Hole 1138A.

Late Pliocene dinoflagellate cyst and diatom analysis from a high resolution sequence in DSDP Site 594, Chatham Rise, south west Pacific

A high resolution mixed carbonate and siliciclastic sequence from DSDP Site 594 contains a detailed record of climate change in the late Pliocene. The sequence can be accurately dated by the LAD of Nitzschia weaveri, the LAD of Thalassiosira insigna, the LAD of T. vulnifica and the LAD of T. kolbei diatom datums. Carbonate content and delta18O signatures provide added resolution and place the sequence between isotope stage 100 and 92. The sequence contains well-preserved and diverse dinoflagellate cyst floras. Use of principal component (PCA) and canonical correspondence analyses (CCA) identifies changes in the assemblages that principally reflect warming and cooling trends. Species association with warmer climates included Impagidinium patulum, I. paradoxum and I. sp. cf. paradoxum while those from cooler climates include Invertecysta tabulata and I. velorum. CCA is shown to be a valuable method of determining the past environmental preferences of extinct species such as I. tabulata.

Diatom datums and abundance in ODP Hole 188-1165B and 188-1166A sediments

The biostratigraphic distribution and qualitative relative abundance of Quaternary-Pliocene diatoms from Ocean Drilling Program Leg 188, Sites 1165 (64.380°S, 67.219°E) and 1166 (67.696°S, 74.787°E) offshore from East Antarctica, are documented in this report. The upper ~50 meters below seafloor (mbsf) of Hole 1165B consists of brown diatom-bearing silty clay spanning the upper Pleistocene to lower Pliocene. The diatom stratigraphy indicates a disconformity at ~17.1 mbsf of 0.5- to 0.6-m.y. duration. The integration of biostratigraphic and magnetostratigraphic data identified other disconformities at ~6.0, 14.4, 15.6, and 16.0 mbsf, but the duration of these hiatuses cannot be resolved through diatom biostratigraphy. In Hole 1166A, a narrow interval of diatomaceous Quaternary sediment is identified in the upper 2.92 mbsf and dated biostratigraphically at <0.38 Ma. The remaining Quaternary-Pliocene section is dominated by diamicton, except at ~114 mbsf, where two thin diatomaceous beds are present. The lower bed is ~65 cm thick, 2.5-2.7 to 2.7-3.2 Ma in age, and possibly disconformably overlain by the upper bed, which is ~15 cm thick and 1.8-2.0 to 2.1-2.5 Ma in age. The Pliocene assemblages in Hole 1166A contain components of both Southern Ocean and Antarctic continental shelf (Ross Sea) diatom floras.