Radiolarian fauna of sediment core MD96-2089 off Lüderitz, Namibia

The study of radiolarian assemblages from Core MD 962086 provides new information on the variability in the upwelling intensity and origin of upwelled water masses over the past 350 ky in one of the major filamentous regions of the Benguela Upwelling System (BUS), located off Lüderitz, Namibia. The use of key radiolarian species to trace the source of upwelled waters, and the use of a radiolarian-based upwelling index (URI) to reconstruct the upwelling intensity represent the first use of radiolarians for paleoceanographic reconstructions in the BUS. These radiolarian-based proxies indicate strongest upwelling during Marine Isotope Stages (MIS) 3, 5, and 8, which compares well with other studies. While during MIS 3 and 8, the radiolarian-based proxies indicate the influx of waters of Southern Ocean origin, they also point to the increased influence of tropical waters during the lower portion of MIS 5. During MIS 2, 4 and 6 the radiolarian assemblages indicate generally lower upwelling intensities, although this signal is complicated by the increased occurrence of organic carbon in the sediments during these intervals. During MIS 2 there appears to be less of an input of Southern Ocean waters to the BUS, although during the also glacial MIS 4 and 6, there is evidence for an increased influence of cold Antarctic waters. The comparison of the results from Core MD 962086 with other studies in the BUS area indicates a non-uniform pattern of upwelling intensity and advection of cold, southern waters into this system during MIS 2. Weaker upwelling signaled by the radiolarian-based proxy in MIS 4 is in contrast to other studies that indicate higher productivity during this time period. In general, the data show that there is a strong spatiotemporal complexity in upwelling intensity in the BUS and that the advection of water into it is not strongly tied to glacial-interglacial variations in climate.

Vegetation, soil and site characteristics of samples taken along the Yamal Transet in 2007-2008

The overarching goal of the Yamal portion of the Greening of the Arctic project is to examine how the terrain and anthropogenic factors of reindeer herding and resource development combined with the climate variations on the Yamal Peninsula affect the spatial and temporal patterns of vegetation change and how these changes are in turn affecting traditional herding of the indigenous people of the region. The purpose of the expeditions was to collect groundobservations in support of remote sensing studies at four locations along a transect that traverses all the major bioclimate subzones of the Yamal Peninsula. This data report is a summary of information collected during the 2007 and 2008 expeditions. It includes all the information from the 2008 data report (Walker et al. 2008) plus new information collected at Kharasavey in Aug 2008. The locations included in this report are Nadym (northern taiga subzone), Laborovaya (southern tundra = subzone E of the Circumpolar Arctic Vegetation Map (CAVM), Vaskiny Dachi (southern typical tundra = subzone D), and Kharasavey (northern typical tundra = subzone C). Another expedition is planned for summer 2009 to the northernmost site at Belyy Ostrov (Arctic tundra = subzone B). Data are reported from 10 study sites - 2 at Nadym, 2 at Laborovaya, and 3 at Vaskiny Dachi and 3 at Kharasavey. The sites are representative of the zonal soils and vegetation, but also include variation related to substrate (clayey vs. sandy soils). Most of the information was collected along 5 transects at each sample site, 5 permanent vegetation study plots, and 1-2 soil pits at each site. The expedition also established soil and permafrost monitoring sites at each location. This data report includes: (1) background for the project, (2) general descriptions and photographs of each locality and sample site, (3) maps of the sites, study plots, and transects at each location, (4) summary of sampling methods used, (5) tabular summaries of the vegetation data (species lists, estimates of cover abundance for each species within vegetation plots, measured percent ground cover of species along transects, site factors for each study plot), (6) summaries of the Normalized Difference Vegetation Index (NDVI) and leaf area index (LAI) along each transect, (7) soil descriptions and photos of the soil pits at each study site, (8) summaries of thaw measurements along each transect, and (9) contact information for each of the participants. One of the primary objectives was to provide the Russian partners with full documentation of the methods so that Russian observers in future years could repeat the observations independently.

DNA alignment and Bayesian trees of partial sequences of COI, COIII and the haemocyanin functional unit f-g of 28 octopod species

Background: Octopods have successfully colonised the world's oceans from the tropics to the poles. Yet, successful persistence in these habitats has required adaptations of their advanced physiological apparatus to compensate impaired oxygen supply. Their oxygen transporter haemocyanin plays a major role in cold tolerance and accordingly has undergone functional modifications to sustain oxygen release at sub-zero temperatures. However, it remains unknown how molecular properties evolved to explain the observed functional adaptations. We thus aimed to assess whether natural selection affected molecular and structural properties of haemocyanin that explains temperature adaptation in octopods. Results: Analysis of 239 partial sequences of the haemocyanin functional units (FU) f and g of 28 octopod species of polar, temperate, subtropical and tropical origin revealed natural selection was acting primarily on charge properties of surface residues. Polar octopods contained haemocyanins with higher net surface charge due to decreased glutamic acid content and higher numbers of basic amino acids. Within the analysed partial sequences, positive selection was present at site 2545, positioned between the active copper binding centre and the FU g surface. At this site, methionine was the dominant amino acid in polar octopods and leucine was dominant in tropical octopods. Sites directly involved in oxygen binding or quaternary interactions were highly conserved within the analysed sequence. Conclusions: This study has provided the first insight into molecular and structural mechanisms that have enabled octopods to sustain oxygen supply from polar to tropical conditions. Our findings imply modulation of oxygen binding via charge-charge interaction at the protein surface, which stabilize quaternary interactions among functional units to reduce detrimental effects of high pH on venous oxygen release. Of the observed partial haemocyanin sequence, residue 2545 formed a close link between the FU g surface and the active centre, suggesting a role as allosteric binding site. The prevalence of methionine at this site in polar octopods, implies regulation of oxygen affinity via increased sensitivity to allosteric metal binding. High sequence conservation of sites directly involved in oxygen binding indicates that functional modifications of octopod haemocyanin rather occur via more subtle mechanisms, as observed in this study.

Benthic foraminifera in the Tasman Sea, Emerald Basin and Challenger Plateau

Im Rahmen des TASQWA-Projektes (Quarternary Variability of Water Masses in the Southern Tasman Sea and the Southern Ocean) wurde eine erstmalige quantitative und taxonomische Bestandsaufnahme der rezenten, benthischen Tiefseeforaminiferen der Korngrößenfraktion > 250 µm in 27 Sedimentoberflächenproben aus dem austral-antarktischen Gebiet durchgeführt. Es konnten 137 Arten bestimmt werden, wobei aber keine Art dominante Anteile in den Proben erreichte. Über benthische Tiefseeforaminiferen im untersuchten Gebiet existiert kaum Literatur. Es gibt zwar aus dem 19. Jhrd. sehr gut dokumentierte Foraminiferen in diesem Bereich, diese decken aber längst nicht alle gefundenen Exemplare ab. Erst um die Jahrtausendwende beschäftigten sich Autoren wieder intensiver mit den australischen und neuseeländischen, benthischen Foraminiferen. Aber auch sie drangen nicht bis in die Tiefsee vor, sondern blieben vorwiegend im Schelfbereich. Aufgrund dieser spärlichen Literatur ist jede einzelne Art ausführlich mit Synonymieliste und Abbildung dokumentiert worden. Die PAST-Analyse generierte mit den 137 Arten und den 27 Stationen sechs Faunenvergesellschaftungen, die überwiegend bathymetrisch zoniert sind. Ab 562 m beginnt am Campbell Plateau in der Hochproduktionszone die Bulimina-Vergesellschaftung. Diese Vergesellschaftung zeichnet sich durch die höchste Individuenzahl aus. Ab 959 m findet sich die Rhizammina-Vergesellschaftung, die im Untersuchungsgebiet am weitesten verbreitet ist. Die weniger oft anzutreffende Cibicides-Vergesellschaftung läßt sich ab 1660 m Tiefe finden. Nur in einer einzigen Probe an der Tasmanschwelle in 2146 m Tiefe, tritt die Reophax-Vergesellschaftung auf, in der die Textulariina überwiegen. Die weniger oft anzutreffende Ehrenbergina-Vergesellschaftung läßt sich ab 1841 m finden. In dieser Vergesellschaftung, in der die Artenanzahl fast an das Niveau der Hochproduktionszone heranreicht, halten sich Rotaliina und Textulariina die Waage. Im Emerald Becken ab 3909 m Tiefe beginnt die Jaculella- Vergesellschaftung. Diese liegt in einem echten Hungergebiet und besteht hauptsächlich aus Textulariina. Im gesamten Untersuchungsgebiet lassen sich durch die Probenauswertung vier unterschiedliche Lebensräume (Challenger Plateau, Campbell Plateau, Emerald Becken und Tasmanschwelle) ausmachen. Da jedoch nur zwei Sedimentoberflächenproben am Challenger Plateau genommen wurden, konnte dieser Bereich nur eingeschränkt mit den anderen drei Bereichen verglichen werden. Die Foraminiferengemeinschaften des Challenger Plateaus und der Tasmanschwelle können jedoch im oberen Bereich der Wassersäule auch nur eingeschränkt miteinander verglichen werden, da man an der Tasmanschwelle Sedimentoberflächenproben erst ab 1634 m genommen hat und am Campbell Plateau Proben ab 562 m vorhanden sind. Die oberen Bereiche (ab 562 m bis ca. 1300 m) des Campbell Plateaus sind Hochproduktionsbereiche, die die höchsten Individuenzahlen pro 10 cm**3 Sediment und die höchste Artenvielfalt aufweisen. Am Südwesthang des Campbell Plateaus läßt sich eine Abfolge der verschiedenen Foraminiferenvergesellschaftungen bis hinunter in das Emerald Becken nachweisen. An der Tasmanschwelle selbst läßt sich keine ausgeprägte Hochproduktionszone erkennen. Generell gibt es hier weniger Arten und weniger Individuen pro 10 cm**3 Sediment als am Cambell Plateau. Das Emerald Becken, als tiefster Bereich des Untersuchungsgebietes und als echtes Hungergebiet, nimmt eine Sonderrolle ein.