Coccoliths in phytoplankton of the Eastern Bering Sea in August 2001

Based on results of field observations in August 1998, July 2000, and August 2001 composition and quantitative distribution of coccolithophorids in the middle part of the Eastern Bering Sea shelf between 56°052'N and 59°019'N was characterized. Emiliania huxleyi abundance, biomass, and population structure as well as role of species in the coccolithophorid community and phytoplankton as a whole were evaluated. Abundance of the species in the upper mixed layer in bloom areas was 1-3 mln cells/l and biomass made up 30-75 mg C/m**3. E. huxleyi share in total phytoplankton numbers and biomass at that reached 98% and 84% respectively. Significant spatial heterogeneity of E. huxleyi, quantitative distribution and population size structure, as well as asynchronism in population development in neighboring parts of the bloom area were shown. The time period, during which population structure in certain part of the area shifts from domination of juvenile cells without coccoliths to a phase of active detritus formation with dying coccolithophorid cells involved, may be estimated as two weeks. A conclusion is made that after anomalous E. huxleyi bloom in 1997 mass development of coccolithophorids became a characteristic feature of phytoplankton community's seasonal succession in the middle part of the Eastern Bering Sea shelf.

Primary productivity and phytoplankton pigment measurements in the North Sea

During the culmination of the phytoplankton spring bloom in the Fladen Ground area in April-Mai 1976, gross primary production was between 1500 and 2000 mg particulate C m**-2 day**-1, at a crop density (mainly diatoms of the genus Chaetoceros) of about 1500-3500 mg C m**-2. Estimates of the C:chlorophyll a ratio in living cells were much lower than those reported in the literature, possibly because part of what is measured as "chlorophyll a" by the common fluorometric method is associated with particles that are not reported as cells. Most of the dark 14C fixation during the bloom's climax was due to abiotic processes. Excretion of 14C-labeled carbohydrates did not account for a significant fraction of the total photosynthetic rate. The low crop after the bloom period, in June, corresponded with nutrient depletion of the euphotic zone. The low photosynthetic efficiency in June may have been a gross underestimate. The presence of relatively high concentrations of chlorophyll derivatives signifies that the algal crop was consumed by heterotrophs, but at a lower rate in April/May than during the June cruise when particularly high molar ratios of phaeophorbide a and phaeophytin a relative to chlorophyll a were found. The high respiratory rate relative to autotrophic production in June manifested itself also in high dark 14C fixation values. The high concentration of phaeophorbide a in the upper 40 m and its scarcity below this depth during the spring bloom climax in April/May implies that copepod grazing at that time took place principally in the euphotic zone. The remarkably high concentration of chlorophyllide a in the surface layer during the bloom period indicates that the part of the crop that was destroyed by the grazers while eating was occasionally as high as the part that was actually ingested.

Occurrence (presence-only) of living Lophelia pertusa reefs in the Irish continental margin

The present data set was used as a training set for a Habitat Suitability Model. It contains occurrence (presence-only) of living Lophelia pertusa reefs in the Irish continental margin, which were assembled from databases, cruise reports and publications. A total of 4423 records were inspected and quality assessed to ensure that they (1) represented confirmed living L. pertusa reefs (so excluding 2900 records of dead and isolated coral colony records); (2) were derived from sampling equipment that allows for accurate (<200 m) geo-referencing (so excluding 620 records derived mainly from trawling and dredging activities); and (3) were not duplicated. A total of 245 occurrences were retained for the analysis. Coral observations are highly clustered in regions targeted by research expeditions, which might lead to falsely inflated model evaluation measures (Veloz, 2009). Therefore, we coarsened the distribution data by deleting all but one record within grid cells of 0.02° resolution (Davies & Guinotte 2011). The remaining 53 points were subject to a spatial cross-validation process: a random presence point was chosen, grouped with its 12 closest neighbour presence points based on Euclidean distance and withheld from model training. This process was repeated for all records, resulting in 53 replicates of spatially non-overlapping sets of test (n=13) and training (n=40) data. The final 53 occurrence records were used for model training.

(Table T1) Total procaryotes, and living bacteria and archaea in black shales of ODP Leg 207 sites

Subseafloor sediments harbor over half of all prokaryotic cells on Earth (Whitman et al., 1998). This immense number is calculated from numerous microscopic acridine orange direct counts (AODCs) conducted on sediment cores drilled during the Ocean Drilling Program (ODP) (Parkes et al., 1994, doi:10.1038/371410a0, 2000, doi:10.1007/PL00010971). Because these counts cannot differentiate between living and inactive or even dead cells (Kepner and Pratt, 1994; Morita, 1997), the population size of living microorganisms has recently been enumerated for ODP Leg 201 sediment samples from the equatorial Pacific and the Peru margin using ribosomal ribonucleic acid targeting catalyzed reporter deposition-fluorescence in situ hybridization (CARD-FISH) (Schippers et al., 2005, doi:10.1038/nature03302). A large fraction of the subseafloor prokaryotes were alive, even in very old (16 Ma) and deep (>400 m) sediments. In this study, black shale samples from the Demerara Rise (Erbacher, Mosher, Malone, et al., 2004, doi:10.2973/odp.proc.ir.207.2004) were analyzed using AODC and CARD-FISH to find out if black shales also harbor microorganisms.