Abundance of microplankton in the eastern Mediterranean Sea in April 2008 during SES_GR2

The dataset is based on samples taken from 12 stations in Northern Aegean Sea, Southern Aegean Sea, Ionian Sea and Libyan Sea during August-September 2008. 12 Niskin bottles (8lt) made by PVC with rubber coated o rings and stainless steel ss springs. Seawater samples (150 mL) were collected from selected depths of the water column (2, 20, 50, 75, 100 m) for the identification and enumeration of phytoplankton cells (>= 5 µm). The samples were fixed with Lugol solution and concentrated to 25 mL by sedimentation. Phytoplankton species abundance was determined with an inverted light microscope (OLYMPUS IX70) according to the Utermohl method (Utermohl, 1958).

Abundance of microplankton in the Turkish Strait during Bilim 2 cruise in April 2008

The HCMR_SES_UNLUATA_CRUISES_TURKISH_STRAITS_CHLA & PP dataset was obtained on samples taken from 5 stations in the Dardanelles Straits, Marmara Sea and Bosporus Straits. These experiments were set up according to DoW of SESAME project. Microplankton species composition analysis was performed according to the Utermöhl's (1958) inverted microscope method. Samples for the identification and enumeration of larger phytoplankton cells (>5?m), were preserved in alkaline Lugol's solution.

Abundance of microplankton in the eastern Mediterranean Sea in March and April 2008 during SES_GR1

The dataset is based on samples taken from 12 stations in Southern Aegean Sea, Northern Aegean Sea, Ionian Sea and Libyan Sea during March-April 2008. 12 Niskin bottles (8lt) made by PVC with rubber coated o rings and stainless steel ss springs. Seawater samples (150 ml) were collected from selected depths of the water column (2, 20, 50, 75, 100 m) for the identification and enumeration of phytoplankton cells (>=5 µm). The samples were fixed with Lugol solution and concentrated to 25 ml by sedimentation. Phytoplankton species abundance was determined with an inverted light microscope (OLYMPUS IX70) according to the Utermohl method (Utermohl, 1958).

Abundance and biomass of protozooplankton from the iron-induced phytoplankton bloom during the EisenEx experiment in 2000 in the Southern Ocean

The responses of larger (>50 µm in diameter) protozooplankton groups to a phytoplankton bloom induced by in situ iron fertilization (EisenEx) in the Polar Frontal Zone (PFZ) of the Southern Ocean in austral spring are presented. During the 21 days of the experiment, samples were collected from seven discrete depths in the upper 150 m inside and outside the fertilized patch for the enumeration of acantharia, foraminifera, radiolaria, heliozoa, tintinnid ciliates and aplastidic thecate dinoflagellates. Inside the patch, acantharian numbers increased twofold, but only negligibly in surrounding waters. This finding is of major interest, since acantharia are suggested to be involved in the formation of barite (BaSO_4 ) found in sediments and which is a palaeoindicator of both ancient and modern high productivity regimes. Foraminifera increased significantly in abundance inside and outside the fertilized patch. However the marked increase of juveniles after a full moon event suggests a lunar periodicity in the reproduction cycle of some foraminiferan species rather than a reproductive response to enhanced food availability. In contrast, adult radiolaria showed no clear trend during the experiment, but juveniles increased threefold indicating elevated reproduction. Aplastidic thecate dinoflagellates almost doubled in numbers and biomass, but also increased outside the patch. Tintinnid numbers decreased twofold, although biomass remained constant due to a shift in the size spectrum. Empty tintinnid loricae, however, increased by a factor of two indicating that grazing pressure on this group mainly by copepods intensified during EisenEx. The results show that iron-fertilization experiments can shed light on the biology and the role of these larger protists in pelagic ecosystem which will improve their use as proxies in palaeoceanography.

Concentrations of aliphatic hydrocarbons and hexachlorocyclohexane isomers in under-ice water, snow, and sea ice from the Greenland Sea

Data on concentrations of aliphatic hydrocarbons and isomers of hexachlorocyclohexane in specimens of various natural environments (water, snow, and ice) of the Greenland Sea obtained during field studies on the ice breaker Otto Shmidt are presented. Analyses were carried out with gas chromatographs using capillary and packed columns. Concentrations of aliphatic and chlorinated hydrocarbons were higher in snow and ice specimens than in sea water and were also higher in less saline water beneath ice. It is concluded that pollutants in this ocean area are at the background level.

Total organic carbon content and isorenieratene concentrations from three holes of ODP Leg 160

Carotenoids were analysed in ca. 1-cm thick subsamples of three laterally time-equivalent sapropels from a west-east transect of the eastern Mediterranean Basin to study euxinic periods during Pliocene sapropel formation. The amount of intact isorenieratene (summed all-trans and cis isomers), ranged from non-detectable at the base and top of a sapropel up to 140 µg/g sediment in the central parts. Isorenieratene accumulation rates at the central and western site are remarkably similar and increase sharply to levels of up to 3.0 mg/m**2/ yr in the central part of the sapropel and then drop to low levels. This pattern indicates an expansion of euxinic conditions reaching into the photic zone, followed by deepening of the chemocline during deposition of this Pliocene sapropel. The sapropel from the easternmost site of the basin, which contains less organic carbon, shows much lower isorenieratene accumulation rates and even absence of isorenieratene in the central part of the sapropel. Ba/Al ratios indicate enhanced palaeoproductivity during sapropel formation, supporting previously proposed models, according to which increased productivity is the driving force for the generation of euxinic conditions.

Estimation of the normal boiling point of organic compounds via group contributions

The normal boiling point is a fundamental thermo-physical property, which is important in describing the transition between the vapor and liquid phases. Reliable method which can predict it is of great importance, especially for compounds where there are no experimental data available. In this work, an improved group contribution method, which is second order method, for determination of the normal boiling point of organic compounds based on the Joback functional first order groups with some changes and added some other functional groups was developed by using experimental data for 632 organic components. It could distinguish most of structural isomerism and stereoisomerism, which including the structural, cis- and trans- isomers of organic compounds. First and second order contributions for hydrocarbons and hydrocarbon derivatives containing carbon, hydrogen, oxygen, nitrogen, sulfur, fluorine, chlorine and bromine atoms, are given. The fminsearch mathematical approach from MATLAB software is used in this study to select an optimal collection of functional groups (65 functional groups) and subsequently to develop the model. This is a direct search method that uses the simplex search method of Lagarias et al. The results of the new method are compared to the several currently used methods and are shown to be far more accurate and reliable. The average absolute deviation of normal boiling point predictions for 632 organic compounds is 4.4350 K; and the average absolute relative deviation is 1.1047 %, which is of adequate accuracy for many practical applications.

Amino acid geochronology of foraminifera test from north Queensland margin

In this study, we demonstrate the utility of amino acid geochronology based on single-foraminiferal tests in Quaternary sediment cores from the Queensland margin, Australia. The large planktonic foraminifer Pulleniatina obliquiloculata is ubiquitous in shelf, slope, and basin sediments of north Queensland as well as pantropical oceans. Fossil tests are resistant to dissolution, and retain substantial concentrations of amino acids (2-4 nmol/mg of shell) over hundreds of thousands of years. Amino acid D and L isomers of aspartic acid (Asp) and glutamic acid (Glu) were separated using reverse phase chromatography, which is sensitive enough to analyze individual foraminifera tests. In all, 462 Pulleniatina tests from 80 horizons in 11 cores exhibit a systematic increase in D/L ratios down core. D/L ratios were determined in 32 samples whose ages are known from AMS 14C analyses. In all cases, the Asp and Glu D/L ratios are concordant with 14C age. D/L ratios of equal-age samples are slightly lower for cores taken from deeper water sites, reflecting the sensitivity of the rate of racemization to bottom water temperature. Beyond the range of 14C dating, previously identified marine oxygen-isotope stage boundaries provide approximate ages of the sediments up to about 500,000 years. For this longer time frame, D/L ratios also vary systematically with isotope-correlated ages. The rate of racemization for Glu and Asp was modeled using power functions. These equations can be used to estimate ages of samples from the Queensland margin extending back at least 500,000 years. This analytical approach provides new opportunities for geochronological control necessary to understand fundamental sedimentary processes affecting a wide range of marine environments.

Abundance and biomass of ciliates in the eastern Mediterranean Sea in April 2008

The dataset was obtained on samples taken from 6 stations in the Dardanelles Straits, Marmara Sea and Bosporus Straits. These experiments were set up according to DoW of SESAME project. Ciliate abundance: Borax-buffered formalin (final concentration 2% formaldehyde). Samples for ciliate counting were stored at 4°C in the dark until observation. For ciliate identification and enumeration, 100 ml samples were left for 24 h in sedimentation cylinders and then observed under an inverted epifluorescence microscope. Ciliate biomass: Ciliate cell sizes were measured and converted into cell volumes using appropriate geometric formulae (Peuto-Moreau 1991). For biomass estimation, the conversion factor 140 fgC µm**3 was used (Putt and Stoecker (1989), doi:10.4319/lo.1989.34.6.1097)).