Data compilation on the biological response to ocean acidification: environmental and experimental context of data sets and related literature

The exponential growth of studies on the biological response to ocean acidification over the last few decades has generated a large amount of data. To facilitate data comparison, a data compilation hosted at the data publisher PANGAEA was initiated in 2008 and is updated on a regular basis (doi:10.1594/PANGAEA.149999). By January 2015, a total of 581 data sets (over 4 000 000 data points) from 539 papers had been archived. Here we present the developments of this data compilation five years since its first description by Nisumaa et al. (2010). Most of study sites from which data archived are still in the Northern Hemisphere and the number of archived data from studies from the Southern Hemisphere and polar oceans are still relatively low. Data from 60 studies that investigated the response of a mix of organisms or natural communities were all added after 2010, indicating a welcomed shift from the study of individual organisms to communities and ecosystems. The initial imbalance of considerably more data archived on calcification and primary production than on other processes has improved. There is also a clear tendency towards more data archived from multifactorial studies after 2010. For easier and more effective access to ocean acidification data, the ocean acidification community is strongly encouraged to contribute to the data archiving effort, and help develop standard vocabularies describing the variables and define best practices for archiving ocean acidification data.

Seawater carbonate chemistry and calcification during a tropical lagoon study at SW lagoon of New Caledonia, 1994

Carbon dioxide and oxygen fluxes were measured in 0.2 m2 enclosures placed at the water sediment interface in the SW lagoon of New Caledonia. Experiments, performed at several stations in a wide range of environments, were carried out both in darkness to estimate respiration and at ambient light, to assess the effects of primary production. The community respiratory quotient (CRQ = CO2 production rate/02 consumption rate) and the community photosynthetic quotient (CPQ= gross O2 production rate/gross CO2 consumption rate) were calculated by functional regressions. The CRQ value, calculated from 61 incubations, was 1.14 (S.E. 0.05) and the CPQ value, obtained from 18 incubations, was 1.03 (S.E. 0.08). The linearity of the relationship between the O2 and the CO2 fluxes suggests that these values are representative for the whole lagoon