A suite of global, cross-scale topographic variables for environmental and biodiversity modeling, links to files in GeoTIFF format

Topographic variation, the spatial variation in elevation and terrain features, underpins a myriad of patterns and processes in geography and ecology and is key to understanding the variation of life on the planet. The characterization of this variation is scale-dependent, i.e. it varies with the distance over which features are assessed and with the spatial grain (grid cell resolution) of analysis. A fully standardized and global multivariate product of different terrain features has the potential to support many large-scale basic research and analytical applications, however to date, such technique is unavailable. Here we used the digital elevation model products of global 250 m GMTED and near-global 90 m SRTM to derive a suite of topographic variables: elevation, slope, aspect, eastness, northness, roughness, terrain roughness index, topographic position index, vector ruggedness measure, profile and tangential curvature, and 10 geomorphological landform classes. We aggregated each variable to 1, 5, 10, 50 and 100 km spatial grains using several aggregation approaches (median, average, minimum, maximum, standard deviation, percent cover, count, majority, Shannon Index, entropy, uniformity). While a global cross-correlation underlines the high similarity of many variables, a more detailed view in four mountain regions reveals local differences, as well as scale variations in the aggregated variables at different spatial grains. All newly-developed variables are available for download at http://www.earthenv.org and can serve as a basis for standardized hydrological, environmental and biodiversity modeling at a global extent.

Secchi depth maps for the Baltic Sea, 2003-2012, with links to GeoTIFs

Secchi depth is a measure of water transparency. In the Baltic Sea region, Secchi depth maps are used to assess eutrophication and as input for habitat models. Due to their spatial and temporal coverage, satellite data would be the most suitable data source for such maps. But the Baltic Sea's optical properties are so different from the open ocean that globally calibrated standard models suffer from large errors. Regional predictive models that take the Baltic Sea's special optical properties into account are thus needed. This paper tests how accurately generalized linear models (GLMs) and generalized additive models (GAMs) with MODIS/Aqua and auxiliary data as inputs can predict Secchi depth at a regional scale. It uses cross-validation to test the prediction accuracy of hundreds of GAMs and GLMs with up to 5 input variables. A GAM with 3 input variables (chlorophyll a, remote sensing reflectance at 678 nm, and long-term mean salinity) made the most accurate predictions. Tested against field observations not used for model selection and calibration, the best model's mean absolute error (MAE) for daily predictions was 1.07 m (22%), more than 50% lower than for other publicly available Baltic Sea Secchi depth maps. The MAE for predicting monthly averages was 0.86 m (15%). Thus, the proposed model selection process was able to find a regional model with good prediction accuracy. It could be useful to find predictive models for environmental variables other than Secchi depth, using data from other satellite sensors, and for other regions where non-standard remote sensing models are needed for prediction and mapping. Annual and monthly mean Secchi depth maps for 2003-2012 come with this paper as Supplementary materials.

Northeast Greenland - Digital Bathymetric Compilation, with links to DBM in ArcGIS format

A new digital bathymetric model (DBM) for the Northeast Greenland (NEG) continental shelf (74°N - 81°N) is presented. The DBM has a grid cell size of 250 m × 250 m and incorporates bathymetric data from 30 multibeam cruises, more than 20 single-beam cruises and first reflector depths from industrial seismic lines. The new DBM substantially improves the bathymetry compared to older models. The DBM not only allows a better delineation of previously known seafloor morphology but, in addition, reveals the presence of previously unmapped morphological features including glacially derived troughs, fjords, grounding-zone wedges, and lateral moraines. These submarine landforms are used to infer the past extent and ice-flow dynamics of the Greenland Ice Sheet during the last full-glacial period of the Quaternary and subsequent ice retreat across the continental shelf. The DBM reveals cross-shelf bathymetric troughs that may enable the inflow of warm Atlantic water masses across the shelf, driving enhanced basal melting of the marine-terminating outlet glaciers draining the ice sheet to the coast in Northeast Greenland. Knolls, sinks, and hummocky seafloor on the middle shelf are also suggested to be related to salt diapirism. North-south-orientated elongate depressions are identified that probably relate to ice-marginal processes in combination with erosion caused by the East Greenland Current. A single guyot-like peak has been discovered and is interpreted to have been produced during a volcanic event approximately 55 Ma ago.

Swath sonar bathymetry during POLARSTERN cruise ARK-XXII/1c (PS70) with links to multibeam raw data files

Multibeam data were measured as part of the project HERMES during R/V Polarstern cruise ARK-XXII/1 (2007-05-29 to 2007-07-25) along transits and survey profiles and partly during stationary work. Data were achieved mainly in the coastal areas of northern Norway, at the Hakon Mosby Mud Volcano at the continental margin approx. 200 nm off the norwegian coast and the AWI-Hausgarten area approx. 150 nm west of Svalbard. A number of surveys were carried out in the coastal areas of northern Norway (Sula Reef, Roest Reef, Traena area, Floholmen area, Sotbakken area) and around the area of the Hakon Mosby Mud Volcano. The multibeam sonar system Atlas Hydrosweep DS-2 (Atlas Hydrographic, http://www.atlashydro.com) was operated using 59 beams and 90° aperture angle. The refraction correction was achieved using CTD profiles measured during this cruise or, during transits, utilizing the system's own cross fan calibration. The quality of data might be reduced during bad weather periods or adverse sea ice conditions (only in the AWI-Hausgarten area). This dataset contains raw data that are not processed and thus may contain errors and blunders in depth and position.

Swath sonar bathymetry during POLARSTERN cruise ANT-XXVI/3 (PS75) with links to multibeam raw data files

Multibeam data were collected during R/V Polarstern cruise ANT-XXVI/3 along track lines of about 10,400 NM total length along transits, survey profiles and during stationary work. Departing in New Zealand the ship passed Pacific Antarctic Ridge heading to Ross Sea. Main working area was the Amundsen Sea and Bellingshausen Sea. Recorded bathymetry is supplementing existing tracks e.g. of R.V. James Clark Ross and R.V. Nathaniel B. Palmer. The refraction correction was achieved utilizing CTD profiles or by the system's own cross fan calibration. The quality of data might be reduced during bad weather periods or adverse sea ice conditions. The dataset contains raw data that are not processed and thus may contain errors and blunders in depth and position.

Swath sonar bathymetry during POLARSTERN cruise ARK-XXII/1b (PS70) with links to multibeam raw data files

Multibeam data were measured as part of the project HERMES during R/V Polarstern cruise ARK-XXII/1 (2007-05-29 to 2007-07-25) along transits and survey profiles and partly during stationary work. Data were achieved mainly in the coastal areas of northern Norway, at the Hakon Mosby Mud Volcano at the continental margin approx. 200 nm off the norwegian coast and the AWI-Hausgarten area approx. 150 nm west of Svalbard. A number of surveys were carried out in the coastal areas of northern Norway (Sula Reef, Roest Reef, Traena area, Floholmen area, Sotbakken area) and around the area of the Hakon Mosby Mud Volcano. The multibeam sonar system Atlas Hydrosweep DS-2 (Atlas Hydrographic, http://www.atlashydro.com) was operated using 59 beams and 90° aperture angle. The refraction correction was achieved using CTD profiles measured during this cruise or, during transits, utilizing the system's own cross fan calibration. The quality of data might be reduced during bad weather periods or adverse sea ice conditions (only in the AWI-Hausgarten area). This dataset contains raw data that are not processed and thus may contain errors and blunders in depth and position.

Swath sonar bathymetry during POLARSTERN cruise ARK-XXII/1a (PS70) with links to multibeam raw data files

Multibeam data were measured as part of the project HERMES during R/V Polarstern cruise ARK-XXII/1 (2007-05-29 to 2007-07-25) along transits and survey profiles and partly during stationary work. Data were achieved mainly in the coastal areas of northern Norway, at the Hakon Mosby Mud Volcano at the continental margin approx. 200 nm off the norwegian coast and the AWI-Hausgarten area approx. 150 nm west of Svalbard. A number of surveys were carried out in the coastal areas of northern Norway (Sula Reef, Roest Reef, Traena area, Floholmen area, Sotbakken area) and around the area of the Hakon Mosby Mud Volcano. The multibeam sonar system Atlas Hydrosweep DS-2 (Atlas Hydrographic, http://www.atlashydro.com) was operated using 59 beams and 90° aperture angle. The refraction correction was achieved using CTD profiles measured during this cruise or, during transits, utilizing the system's own cross fan calibration. The quality of data might be reduced during bad weather periods or adverse sea ice conditions (only in the AWI-Hausgarten area). This dataset contains raw data that are not processed and thus may contain errors and blunders in depth and position.

Swath sonar bathymetry during POLARSTERN cruise ANT-XIX/5 (PS61) with links to multibeam raw data files

Multibeam data were measured during R/V Polarstern cruise ANT-XIX/5 along track lines of approximately 4000 NM total length in the Scotia Sea. Data were achieved along the Scotia Arc from Burdwood Bank to King George Island. A multibeam box survey was conducted at the southern part of the Discovery Rise, located at 50°55'S / 35°30'W and covering an area of 90 x 15 NM. A bathymetric survey of 25 x 60 NM was carried out at the eastern part of the South Shetland Trench and its intersection with the Shackleton Fracture Zone, continuing multibeam data from former expeditions. The multibeam sonar system Hydrosweep DS-2 was operated using 59 beams and 90° aperture angle. The refraction correction was achieved utilizing the system's own cross fan calibration. The quality of data might be reduced during bad weather periods or adverse sea ice conditions. The dataset contains raw data that are not processed and thus may contain errors and blunders in depth and position.

Swath sonar bathymetry during POLARSTERN cruise ANT-XXVI/2 (PS75) with links to multibeam raw data files

Multibeam data were collected during R/V Polarstern cruise ANT-XXVI/2 along track lines of about 9,270 NM total length along transits, survey profiles and during stationary work. Departing in Punta Arenas the ship headed for its first main working area, the Eltanin Impact Area. In the following the ship's track crosses Pacific Antarctic Ridge and the corresponding fracture zones several times before arriving in Wellington. The refraction correction was achieved utilizing CTD profiles or by the system's own cross fan calibration. The quality of data might be reduced during bad weather periods or adverse sea ice conditions. The dataset contains raw data that are not processed and thus may contain errors and blunders in depth and position.

Swath sonar bathymetry during POLARSTERN cruise ANT-XIX/2 (PS61) with links to multibeam raw data files

Multibeam data were measured during R/V Polarstern cruise ANT-XIX/2 along track lines of about 6,100 NM total length along transits, survey profiles and during stationary work, mainly in the Weddell Sea. A multibeam survey was conducted in the eastern Weddell Sea at a potential earthquake area, located east of Fimbul Canyon. The tracks complemented data from former expeditions and extended the surveyed area to 60 by 80 NM. Data were achieved during the transit to the eastern Weddell Sea and by several wide spaced track lines at the continental margin east of Antarctic Peninsula. Between 66°30'S and 67°S a systematic survey of about 35 by 40 NM was carried out at a slump area. The multibeam sonar system Hydrosweep DS-2 was operated using 59 beams and 90° aperture angle. The refraction correction was achieved utilizing the system's own cross fan calibration. The quality of data might be reduced during bad weather periods or adverse sea ice conditions. The dataset contains raw data that are not processed and thus may contain errors and blunders in depth and position.

Swath sonar bathymetry during POLARSTERN cruise ANT-XXII/2 (PS67) with links to multibeam raw data files

Multibeam data were measured during R/V Polarstern cruise ANT-XXII/2 along track lines of approximately 6800 NM total length during transits and the Ice Station POLarstern (ISPOL) experiment. Data were achieved during the transit from Cape Town via Bouvet Island towards Antarctic Peninsula for three weeks, crossing Agulhas Ridge, Agulhas Basin and Mid-Atlantic Ridge, and during the transit to Cape Town via South Georgia for two weeks. During the ISPOL station, data were gained while the vessel was drifting for five weeks anchored to an ice floe in the south-western Weddell Sea, starting at 68°13'S/54°47'W. The multibeam sonar system Hydrosweep DS-2 was operated using 59 beams and 90° aperture angle. The refraction correction was achieved using CTD profiles or utilizing the system's own cross fan calibration. The quality of data might be reduced during bad weather periods or adverse sea ice conditions. The dataset contains raw data that are not processed and thus may contain errors and blunders in depth and position.

Swath sonar bathymetry during POLARSTERN cruise ARK-XXIII/3 (PS72) with links to multibeam raw data files

Multibeam data were measured during R/V Polarstern cruise ARK-XXIII/3 along track lines of 7248 NM total length in the Arctic Ocean during transits and stationary work. Data were achieved on the transit from Iceland through the Northwestern Passage and the Beaufort Sea to the East Siberian Sea, crossing Northwind Ridge and Chukchi Plateau. The continental margin of East Siberian was surveyed by several wide spaced transects for almost three weeks. The Mendeleev Ridge and the surrounding deep sea bassins were investigated by a transect of about 1000 NM length, located at 80°-81°N. Lomonosov Ridge and Gakkel Ridge were also crossed. The multibeam sonar system Hydrosweep DS-2 was operated using 59 beams and 90° aperture angle, 120° in shallow water areas. The refraction correction was achieved utilizing 14 CTD profiles measured during the cruise or by the system's own cross fan calibration. The quality of data might be reduced during bad weather periods or adverse sea ice conditions. The dataset contains raw data that are not processed and thus may contain errors and blunders in depth and position.