Geochemistry of phosphate and glauconites of ODP Leg 128 samples

Glauconites and phosphates have been detected in almost all investigated samples at Sites 798 (uppermost Miocene or lower Pliocene to Pleistocene) and 799 (early middle Miocene to Pleistocene). Autochthonous occurrences appear in very minor quantities (generally below 0.2%) throughout the drilled sequences, whereas allochthonous accumulations are limited to the lower Pliocene or uppermost Miocene sequence at Site 798 (glauconites) and to the upper and middle Miocene sequence at Site 799 (upper and middle Miocene: glauconites; middle Miocene: phosphates). X-ray fluorescence, microprobe, and bulk chemical analyses indicate high variabilities in cations and anions and generally low oxide totals. This is probably related to the substitution of phosphate and fluoride aniors by hydroxide and carbonate anions in phosphates and to the depletion of iron, aluminum, and potassium cations and the enrichment in hydroxide and crystal water in glauconites. Gradients in pore-water contents of dissolved phosphate and fluoride at Sites 798 and 799 suggest a depth of phosphate precipitation between 30 and 50 mbsf, with fluoride as the limiting element for phosphate precipitation at Site 798. Phosphate and fluoride appear to be balanced at Site 799. Crude extrapolations indicate that the Japan-Sea sediments may have taken up approximately 7.2*10**10 g P total/yr during the Neogene and Pleistocene. This amount corresponds to approximately 0.3% of the estimated present-day global transfer of phosphorus into the sediments and suggests that the Japan Sea constitutes an average sink for this element. The two main carriers of phosphorus into the present Japan Sea are the Tshushima and the Liman currents, importing approximately 6.6*10**10 g P and 5.7*10**10 g P per year, respectively. Bulk chemical analyses suggest that at least 36% of P total in the sediments is organically bound phosphorus. This rather high value, which corresponds to the measured Japan-Sea deep-water P organic/P total ratios, probably reflects rapid transport of organic phosphorus into the depth of the Japan Sea.

Carbon and carbonate concentrations of recent and Pleistocene sediments of the Norwegian-Greenland Sea

Surface sediment samples from the Norwegian-Greenland Sea were investigated to reconstruct the spatial distribution of recent carbonate dissolution on the seafloor. Additionally, carbonate dissolution records of Ocean Drilling Program sites 985 and 987 are presented to outline the development of Pleistocene carbonate preservation. Today, well-preserved carbonate tests can be observed along the inflow of warm Atlantic surface water, extending as far as into the northernmost Norwegian-Greenland Sea. Increased dissolution is indicated along the continental margins and in the deepest parts of the Greenland Basin. Factors favoring carbonate preservation were found to be supersaturation of the water column with respect to calcium carbonate, high carbonate rain and probably excess alkalinity of bottom waters supplied by the arctic river discharge. Supralysoklinal dissolution is most important for recent carbonate dissolution in the Norwegian-Greenland Sea, whereas the deepest parts of the Greenland Basin reaches the calcite saturation horizon. Pleistocene dissolution records show some prominent peaks of extreme carbonate dissolution. During the Brunhes chron, carbonate dissolution maxima can be related to meltwater pulses, which probably inhibited deep-water formation in the Norwegian-Greenland Sea during deglaciation events. Long-term severe carbonate dissolution is evident during the late Matuyama chron. This can be probably related to low carbonate rain, due to a more eastwards located East Greenland Current and the nearly absence of the not yet polar adapted Neogloboquadrina pachyderma sin. during that period. Extreme dissolution events during the late Matuyama indicate strongly reduced deep-water formation.

Trace metals in shells of mussels and clams from deep-sea hydrothermal vent fields of the Mid-Atlantic Ridge and East Pacific Rise

Bioaccumulation of trace metals in carbonate shells of mussels and clams was investigated at seven hydrothermal vent fields of the Mid-Atlantic Ridge (Menez Gwen, Snake Pit, Rainbow, and Broken Spur) and the Eastern Pacific (9°N and 21°N at the East Pacific Rise and the southern trough of Guaymas Basin, Gulf of California). Mineralogical analysis showed that carbonate skeletons of mytilid mussel Bathymodiolus sp. and vesicomyid clam Calyptogena m. are composed mainly of calcite and aragonite, respectively. The first data were obtained for contents of a variety of chemical elements in bivalve carbonate shells from various hydrothermal vent sites. Analyses of chemical compositions (including Fe, Mn, Zn, Cu, Cd, Pb, Ag, Ni, Cr, Co, As, Se, Sb, and Hg) of 35 shell samples and 14 water samples from mollusk biotopes revealed influences of environmental conditions and some biological parameters on bioaccumulation of metals. Bivalve shells from hydrothermal fields with black smokers are enriched in Fe and Mn by factor of 20-30 relative to the same species from the Menez Gwen low-temperature vent site. It was shown that essential elements (Fe, Mn, Ni, and Cu) more actively accumulated during early ontogeny of the shells. High enrichment factors of most metals (n x 100 - n x 10000) indicate efficient accumulation function of bivalve carbonate shells. Passive metal accumulation owing to adsorption on shell surfaces was estimated to be no higher than 50% of total amount and varied from 14% for Fe to 46% for Mn.

Uranium and radioactive isotopes in bottom sediments and Fe-Mn nodules and crusts of seas and oceans

The main stages of the sedimentary cycle of uranium in modern marine basins are under consideration in the book. Annually about 18 thousand tons of dissolved and suspended uranium enters the ocean with river runoff. Depending on a type of a marine basin uranium accumulated either in sediments of deep-sea basins, or in sediments of continental shelves and slopes. In the surface layer of marine sediments hydrogenic uranium is predominantly bound with organic matter, and in ocean sediments also with iron, manganese and phosphorus. In diagenetic processes there occurs partial redistribution of uranium in sediments, as well as its concentration in iron-manganese, phosphate and carbonate nodules and biogenic phosphate detritus. Concentration of uranium in marine sediments of various types depending on their composition, as well as on forms of its entering, degree of differentiation and of sedimentation rates, on hydrochemical regime and water circulation, and on intensity of diagenetic processes.

Chemical and mineral compositions of recent and ancient sediments and sedimentary rocks from the Mariana Trench

On the bed and on the ocean slope of the southern latitudinal part of the Mariana Trench ancient sediments, as well as sedimentary and igneous rocks are exposed. In the lower part of the sampled part of the studied section Late Oligocene to Early Miocene chalk-like limestones and marls occur. Upward marly tuffites and tuffs (apparently alternating with carbonate rocks) occur. These rocks are overlain by Early Miocene tuffaceous clays and siliceous-clayey muds. In the upper part of the section there are Pleistocene pelagic clays and ethmodiscus oozes.

Averages and ranges of paleoenvironmental proxy records of ODP Hole 108-658C (Table 1)

Several high-resolution proxy environmental records have been obtained for the last 35 kyr from ODP Hole 658C, a well-studied site ca. 200 km off Cap Blanc, NW Africa. The collective assessment based on the marine proxies (UK'37 SST, contents of TOC and chlorins, Upwelling Radiolarian Index and the percentage of Florisphaera profunda), surprisingly indicates that the last glacial maximum (LGM) was characterized by warmer sea surface temperature (SST), weaker upwelling, and lower marine productivity, compared with the preceding older glacial and subsequent deglaciation periods. Of the terrigenous proxies, the mean grain size of the non-carbonate fraction and the terrigenous alkane content indicate that wind strength and aridity were high. The weaker upwelling at the 658 site during the LGM may have resulted from changes in the strength and direction of the wind systems and/or shifts in the position and geometry of the upwelling cell.

Concentrations of As and other chemical elements in bottom sediments of the Baltic Sea

As is less toxic than Hg, Cd, Pb, Se, Zn, and Cu. The As clarke for clays and shales is 10 ppm. Our samples of bottom sediments from Kurshskii Bay were determined to contain from 15 to 26 ppm As and up to 34 ppm As in the vicinity of the Neman River mouth. Elevated As concentrations (50-114 ppm) were detected in four columns of subsurface bottom sediments (at depths of 10-65 cm) from the Vistula Lagoon. Elevated As concentrations (50-180 ppm) were also found in a few surface samples of sand from the Gdansk Deep near oil platform D-6. These sediments are either partly contaminated with anthropogenic As or contain Fe sulfides and glauconite, which can concentrate As and contain its elevated concentrations. The As concentration in columns of bottom sediments from the Gulf of Finland were at the natural background level (throughout the columns) typical of the area (9-34 ppm). We repeatedly detected very high As concentrations (up to 227 ppm As) in politic ooze from Bornholm Deep, in the vicinity of the sunken vessel with chemical weapons. The sources of elevated As concentrations in the Baltic Sea are the following: (1) chemical weapon (CW) material buried in the floor of the Baltic Sea; (2) As-bearing pesticides, agricultural mineral fertilizers, and burned coal and other fuels; (3) kerogen-bearing Ordovician rocks exposed on the bottom; and (4) As-rich Fe sulfides brought to the area together with construction sand and gravel. This mixture was used in paper production and for the construction of hydraulic engineering facilities in the Vistula Lagoon in the early 20th century and later caused the so-called lagoon disease.

Isotopic composition of carbon in organic matter of sediments and particulate matter from the Northwest Pacific

A study was made of isotopic composition of carbon in lipids found in three samples of separate particulates and in eight bottom sediment samples collected in a from the Simushir Island towards the open Pacific Ocean. Average d13C of lipids from particulates was 2.3 per mil lower than one of sediments. Humic acids from sediments are the most isotopically heavy fraction (d13C = -21.2 per mil). Isotopic composition of carbon in lipids depended on their total content in samples and on composition of sediments. Formation of isotopically heavy lipids in the surface layer of sediments may be associated with biogeochemical resynthesis of humic acids.

Properties of seawater and particulate matter (fluorescence) from a WETLabs Eco-FL sensor mounted on the continuous surface water sampling system during the Tara Oceans expedition 2009-2013

The Tara Oceans Expedition (2009-2013) sampled the world oceans on board a 36 m long schooner, collecting environmental data and organisms from viruses to planktonic metazoans for later analyses using modern sequencing and state-of-the-art imaging technologies. Tara Oceans Data are particularly suited to study the genetic, morphological and functional diversity of plankton. The present data set provides continuous measurements made with a WETLabs Eco-FL sensor mounted on the flowthrough system between June 4th, 2011 and March 30th, 2012. Data was recorded approximately every 10s. Two issues affected the data: 1. Periods when the water 0.2µm filtered water were used as blanks and 2. Periods where fluorescence was affected by non-photochemical quenching (NPQ, chlorophyll fluorescence is reduced when cells are exposed to light, e.g. Falkowski and Raven, 1997). Median data and their standard deviation were binned to 5min bins with period of light/dark indicated by an added variable (so that NPQ affected data could be neglected if the user so chooses). Data was first calibrated using HPLC data collected on the Tara (there were 36 data within 30min of each other). Fewer were available when there was no evident NPQ and the resulting scale factor was 0.0106 mg Chl m-3/count. To increase the calibration match-ups we used the AC-S data which provided a robust estimate of Chlorophyll (e.g. Boss et al., 2013). Scale factor computed over a much larger range of values than HPLC was 0.0088 mg Chl m-3/count (compared to 0.0079 mg Chl m-3/count based on manufacturer). In the archived data the fluorometer data is merged with the TSG, raw data is provided as well as manufacturer calibration constants, blank computed from filtered measurements and chlorophyll calibrated using the AC-S. For a full description of the processing of the Eco-FL please see Taillandier, 2015.

Properties of seawater and particulate matter from a FRRF instrument, operating in a flow-through mode on the continuous surface water sampling system during the Tara Oceans expedition 2009-2013

The Tara Oceans Expedition (2009-2013) sampled the world oceans on board a 36 m long schooner, collecting environmental data and organisms from viruses to planktonic metazoans for later analyses using modern sequencing and state-of-the-art imaging technologies. Tara Oceans Data are particularly suited to study the genetic, morphological and functional diversity of plankton. The present data set provides continuous measurements made with a FRRF instrument, operating in a flow-through mode during the 2009-2012 part of the expedition. It operates by exciting chlorophyll fluorescence using a series of short flashes of controlled energy and time intervals (Kolber et al, 1998). The fluorescence transients produced by this excitation signal were analysed in real-time to provide estimates of abundance of photosynthetic pigments, the photosynthetic yields (Fv/Fm), the functional absorption cross section (a proxy for efficiency of photosynthetic energy acquisition), the kinetics of photosynthetic electron transport between Photosystem II and Photosystem I, and the size of the PQ pool. These parameters were measured at excitation wavelength of 445 nm, 470nm, 505 nm, and 535 nm, allowing to assess the presence and the photosynthetic performance of different phytoplankton taxa based on the spectral composition of their light harvesting pigments. The FRRF-derived photosynthetic characteristics were used to calculate the initial slope, the half saturation, and the maximum level of Photosynthesis vs Irradiance relationship. FRRF data were acquired continuously, at 1-minute time intervals.

Properties of seawater and particulate matter from a WETLabs ALFA hyperspectral laser spectrofluorometer mounted on the continuous surface water sampling system during the Tara Oceans expedition 2009-2013

The Tara Oceans Expedition (2009-2013) sampled the world oceans on board a 36 m long schooner, collecting environmental data and organisms from viruses to planktonic metazoans for later analyses using modern sequencing and state-of-the-art imaging technologies. Tara Oceans Data are particularly suited to study the genetic, morphological and functional diversity of plankton. The present data set provides continuous measurements made with an Aquatic Laser Fluorescence Analyzer (ALFA) (Chekalyuk et al., 2014), connected in-line to the TARA flow through system during 2013. The ALFA instrument provides dual-wavelength excitation (405 and 514 nm) of laser-stimulated emission (LSE) for spectral and temporal analysis. It offers in vivo fluorescence assessments of phytoplankton pigments, biomass, photosynthetic yield (Fv/Fm), phycobiliprotein (PBP)-containing phytoplankton groups, and chromophoric dissolved organic matter (CDOM) (Chekalyuk and Hafez, 2008; 2013A). Spectral deconvolution (SDC) is used to assess the overlapped spectral bands of aquatic fluorescence constituents and water Raman scattering (R). The Fv/Fm measurements are spectrally corrected for non-chlorophyll fluorescence background produced by CDOM and other constituents (Chekalyuk and Hafez, 2008). The sensor was cleaned weakly following the manufacturer recommended protocol.

Biogeochemical parameters (oxygen, nitrate, phosphate, TOC and strontium) at three sites from the Clarion-Clipperton Fracture Zone

The Clarion-Clipperton Fracture Zone (CCFZ) in the Pacific Ocean is characterized by organic carbon-starved sediments and meter-scale oxygen penetration into the sediment. Furthermore, numerous seamounts occur throughout its deep-sea plain, which may serve as conduits for low-temperature hydrothermal circulation of seawater through the oceanic crust. Recent studies in deep-sea environments of the Pacific and Atlantic Oceans have suggested and presented evidence of an exchange of dissolved constituents between the seawater flowing in the basaltic crust and the pore water of the overlying sediments. Through high-resolution pore-water oxygen and nutrient measurements, we examined fluxes and geochemical interactions between the seamount basaltic basement and pore waters of the overlying sediments at three sites located on a radial transect from the foot of Teddy Bare, a small seamount in the CCFZ. At three sites, located 1000, 700 and 400 m away from the foot of the seamount, we found that oxygen concentrations initially decrease with sediment depth but start to increase at depths of 3 and 7 m towards the basaltic basement. NO32- concentrations mirror the oxygen concentration profiles, as they increase with sediment depth but decrease towards the basement. We performed transport reaction modeling and determined at one site the 87Sr/86Sr ratio of the pore water and the bottom water overlying the sediments, which indicated that the 87Sr/86Sr ratio of the pore water at the bottom of the sediment column is similar to the seawater Transport-reaction modeling revealed that (1) the diffusive flux of oxygen from the basaltic basement outpaces the oxygen consumption through organic matter oxidation and nitrification in the basal sediments and (2) the nutrient exchange between the sediment and the underlying basaltic crust occurs at orders-of-magnitude lower rates than between the upper sediment and the overlying bottom water. Our results suggest an upward diffusion of oxygen from seawater circulating within the seamount crust into the overlying basal sediments. The oxygen profiles presented here represent the first of their kind ever measured in the Pacific Ocean, as they indicate an upward flux of molecular oxygen from a basaltic aquifer, something that has so far only been documented - at one other location worldwide - the North Pond site in the Atlantic Ocean. We show that the diffusion of oxygen from the seamount basaltic basement into the overlying pore waters affects the preservation of organic compounds and helps to maintain a completely oxygenated sedimentary column at all 3 sites near the seamount.