New biosensor applications of surface plasmon and hydrogel optical waveguide spectroscopy

Rapid and sensitive detection of chemical and biological analytes becomes increasingly important in areas such as medical diagnostics, food control and environmental monitoring. Optical biosensors based on surface plasmon resonance (SPR) and optical waveguide spectroscopy have been extensively pushed forward in these fields. In this study, we combine SPR, surface plasmon-enhanced fluorescence spectroscopy (SPFS) and optical waveguide spectroscopy with hydrogel thin film for highly sensitive detection of molecular analytes.rnrnA novel biosensor based on SPFS which was advanced through the excitation of long range surface plasmons (LRSPs) is reported in this study. LRSPs are special surface plasmon waves propagating along thin metal films with orders of magnitude higher electromagnetic field intensity and lower damping than conventional SPs. Therefore, their excitation on the sensor surface provides further increased fluorescence signal. An inhibition immunoassay based on LRSP-enhanced fluorescence spectroscopy (LRSP-FS) was developed for the detection of aflatoxin M1 (AFM1) in milk. The biosensor allowed for the detection of AFM1 in milk at concentrations as low as 0.6 pg mL-1, which is about two orders of magnitude lower than the maximum AFM1 residue level in milk stipulated by the European Commission legislation.rnrnIn addition, LRSPs probe the medium adjacent to the metallic surface with more extended evanescent field than regular SPs. Therefore, three-dimensional binding matrices with up to micrometer thickness have been proposed for the immobilization of biomolecular recognition elements with large surface density that allows to exploit the whole evanescent field of LRSP. A photocrosslinkable carboxymethyl dextran (PCDM) hydrogel thin film is used as a binding matrix, and it is applied for the detection of free prostate specific antigen (f-PSA) based on the LRSP-FS and sandwich immunoassay. We show that this approach allows for the detection of f-PSA at low femto-molar range, which is approximately four orders of magnitude lower than that for direct detection of f-PSA based on the monitoring of binding-induced refractive index changes.rnrnHowever, a three dimensional hydrogel binding matrix with micrometer thickness can also serve as an optical waveguide. Based on the measurement of binding-induced refractive index changes, a hydrogel optical waveguide spectroscopy (HOWS) is reported for a label-free biosensor. This biosensor is implemented by using a SPR optical setup in which a carboxylated poly(N-isoproprylacrylamide) (PNIPAAm) hydrogel film is attached on a metallic surface and modified by protein catcher molecules. Compared to regular SPR biosensor with thiol self-assembled monolayer (SAM), HOWS provides an order of magnitude improved resolution in the refractive index measurements and enlarged binding capacity owing to its low damping and large swelling ratio, respectively. A model immunoassay experiment revealed that HOWS allowed detection of IgG molecules with a 10 pM limit of detection (LOD) that was five-fold lower than that achieved for SPR with thiol SAM. For the high capacity hydrogel matrix, the affinity binding was mass transport limited.rnrnThe mass transport of target molecules to the sensor surface can play as critical a role as the chemical reaction itself. In order to overcome the diffusion-limited mass transfer, magnetic iron oxide nanoparticles were employed. The magnetic nanoparticles (MNPs) can serve both as labels providing enhancement of the refractive index changes, and ���vehicles��� for rapidly delivering the analytes from sample solution to an SPR sensor surface with a gradient magnetic field. A model sandwich assay for the detection of �� human chorionic gonadotropin (��hCG) has been utilized on a gold sensor surface with metallic diffraction grating structure supporting the excitation of SPs. Various detection formats including a) direct detection, b) sandwich assay, c) MNPs immunoassay without and d) with applied magnetic field were compared. The results show that the highly-sensitive MNPs immunoassay improves the LOD on the detection of ��hCG by a factor of 5 orders of magnitude with respect to the direct detection.rn

Hydrogels for DNA isolation from blood

This dissertation describes the synthesis of surface attached hydrogel biomaterials, characterization of their properties, evaluation of structuring concepts and the investigation of these materials in the isolation of DNA from human whole blood. Photosensitive hydrogel precursor materials on the basis of hydroxyethylmethacrylate (HEMA) were synthesized by free radical polymerization. In order to obtain surface bound hydrogel films, the precursors were deposited on a suitable substrate and subsequently irradatiated with UV - light to accomplish the formation of crosslinks in the film and create surface attachment. The composition of the polymerization precursor materials was determined by comprehensive NMR and GPC studies, revealing the copolymerizationrnbehaviour of the used monomers - HEMA derivatives and the photocrosslinkerrnMABP - and their respective distribution in the hydrogel precursors. The degree of crosslinking of the hydrogels was characterized with UV/vis spectroscopy. Stress-strain measurements were conducted in order to investigate the mechanical properties of the biomaterials. Moreover, the swelling process and biomolecule adsorption properties of the hydrogels were investigated with SPR/OW spectroscopy. For this, the deposition and binding of the hydrogels on gold or SiO2 surfaces was facilitated with photocrosslinkable adhesion promotors. The produced hydrogels were mechanically rigid and stablernunder the conditions of PCR and blood lysis. Furthermore, strategies towards the increase of hydrogel surface structure and porosity with porosigens, 2D laser interference lithography and photocleavable blockcopolymers were investigated. At last, a combinatorial strategy was used for the determination of the usefulness of hydrogels for the isolation from DNA from blood. A series of functionalized hydrogel precursors were synthesized, transferred to the surface inside a PCR tube and subsequently screened in regard to DNA adsorption properties with Taqman quantitative PCR. This approach yielded a promising candidate for a functional PCR tube coating that would allow the entire DNA isolation procedure being carried out in a single reaction container.rnThereforce, the practical application of such macromolecular architectures can be envisioned to improve industrial DNA diagnostic processes.

A planar Penning trap

In this thesis I present theoretical and experimental results concern- ing the operation and properties of a new kind of Penning trap, the planar trap. It consists of circular electrodes printed on an isolating surface, with an homogeneous magnetic field pointing perpendicular to that surface. The motivation of such geometry is to be found in the construction of an array of planar traps for quantum informa- tional purposes. The open access to radiation of this geometry, and the long coherence times expected for Penning traps, make the planar trap a good candidate for quantum computation. Several proposals for quantum 2-qubit interactions are studied and estimates for their rates are given. An expression for the electrostatic potential is presented, and its fea- tures exposed. A detailed study of the anharmonicity of the potential is given theoretically and is later demonstrated by experiment and numerical simulations, showing good agreement. Size scalability of this trap has been studied by replacing the original planar trap by a trap twice smaller in the experimental setup. This substitution shows no scale effect apart from those expected for the scaling of the parameters of the trap. A smaller lifetime for trapped electrons is seen for this smaller trap, but is clearly matched to a bigger misalignment of the trap���s surface and the magnetic field, due to its more difficult hand manipulation. I also give a hint that this trap may be of help in studying non-linear dynamics for a sextupolarly perturbed Penning trap.

Nahfeld-induzierte Elektronenemissions-Mikrospektroskopie an stark gekoppelten Plasmonen und metallischen Mikrostrukturen

Plasmonen stellen elektromagnetische Moden in metallischen Strukturen dar, in denen die quasifreien Elektronen im Metall kollektiv oszillieren. W��hrend des letzten Jahrzehnts erfuhr das Gebiet der Plasmonik eine rasante Entwicklung, basierend auf zunehmenden Fortschritten der Nanostrukturierungsmethoden und spektroskopischen Untersuchungsmethoden, die zu der M��glichkeit von systematischen Einzelobjektuntersuchungen wohldefinierter Nanostrukturen f��hrte. Die Anregung von Plasmonen resultiert neben einer radiativen Verst��rkung der optischen Streuintensit��t im Fernfeld in einer nicht-radiativen ��berh��hung der Feldst��rke in unmittelbarer Umgebung der metallischen Struktur (Nahfeld), die durch die koh��rente Ladungsansammlung an der metallischen Oberfl��che hervorgerufen wird. Das optische Nahfeld stellt folglich eine bedeutende Gr����e f��r das fundamentale Verst��ndnis der Wirkung und Wechselwirkung von Plasmonen sowie f��r die Optimierung plasmonbasierter Applikationen dar. Die gro��e Herausforderung liegt in der Kompliziertheit des experimentellen Zugangs zum Nahfeld, der die Entwicklung eines grundlegenden Verst��ndisses des Nahfeldes verhinderte.rnIm Rahmen dieser Arbeit wurde Photoemissionselektronenmikroskopie (PEEM) bzw. -mikrospektroskopie genutzt, um ortsaufgel��st die Eigenschaften nahfeld-induzierter Elektronenemission zu bestimmen. Die elektrodynamischen Eigenschaften der untersuchten Systeme wurden zudem mit numerischen, auf der Finiten Integrationsmethode basierenden Berechnungen bestimmt und mit den experimentellen Resultaten verglichen.rnAg-Scheiben mit einem Durchmesser von 1��m und einer H��he von 50nm wurden mit fs-Laserstrahlung der Wellenl��nge 400nm unter verschiedenen Polarisationszust��nden angeregt. Die laterale Verteilung der infolge eines 2PPE-Prozesses emittierten Elektronen wurde mit dem PEEM aufgenommen. Aus dem Vergleich mit den numerischen Berechnungen l��sst sich folgern, dass sich das Nahfeld an unterschiedlichen Stellen der metallischen Struktur verschiedenartig ausbildet. Insbesondere wird am Rand der Scheibe bei s-polarisierter Anregung (verschwindende Vertikalkomponente des elektrischen Felds) ein Nahfeld mit endlicher z-Komponente induziert, w��hrend im Zentrum der Scheibe das Nahfeld stets proportional zum einfallenden elektrischen Feld ist.rnWeiterhin wurde erstmalig das Nahfeld optisch angeregter, stark gekoppelter Plasmonen spektral (750-850nm) untersucht und f��r identische Nanoobjekte mit den entsprechenden Fernfeldspektren verglichen. Dies erfolgte durch Messung der spektralen Streucharakteristik der Einzelobjekte mit einem Dunkelfeldkonfokalmikroskop. Als Modellsystem stark gekoppelter Plasmonen dienten Au Nanopartikel in sub-Nanometerabstand zu einem Au Film (nanoparticle on plane, NPOP). Mit Hilfe dieser Kombination aus komplement��ren Untersuchungsmethoden konnte erstmalig die spektrale Trennung von radiativen und nicht-radiativen Moden stark gekoppelter Plasmonen nachgewiesen werden. Dies ist insbesondere f��r Anwendungen von gro��er Relevanz, da reine Nahfeldmoden durch den unterdr��ckten radiativen Zerfall eine gro��e Lebensdauer besitzen, so dass deren Verst��rkungswirkung besonders lange nutzbar ist. Ursachen f��r die Unterschiede im spektralen Verhalten von Fern- und Nahfeld konnten durch numerische Berechnungen identifiziert werden. Sie zeigten, dass das Nahfeld nicht-sp��rischer NPOPs durch die komplexe Oszillationsbewegung der Elektronen innerhalb des Spaltes zwischen Partikel und Film stark ortsabh��ngig ist. Zudem reagiert das Nahfeld stark gekoppelter Plasmonen deutlich empfindlicher auf strukturelle St��rstellen des Resonators als die Fernfeld-Response. Ferner wurde der Elektronenemissionsmechanismus als optischer Feldemissionsprozess identifiziert. Um den Vorgang beschreiben zu k��nnen, wurde die Fowler-Nordheim Theorie der statischen Feldemission f��r den Fall harmonisch oszillierender Felder modifiziert.