Biomimetisches Modell eines Photosystems aus dem pflanzlichen Photosyntheseapparat

In dieser Arbeit wurde ein biomimetisches Modell für ein pflanzliches Photosystem bestehend aus dem rekombinanten Hauptlichtsammlerkomplex (LHCII) als Absorptions- und Energietransfereinheit und einem N-terminal an das Protein gebundenen Farbstoff als Energieakzeptor hergestellt. Mehrere LHCII-Farbstoff-Konstrukte wurden getestet, die höchste Energietransfereffizienz von komplexgebundenem Chlorophyll-a zum Energieakzeptor konnte an einem LHCII-Benzoylterrylendicarboximid-Konstrukt gemessen werden. Bei Raumtemperatur wurde hier 70% der Chlorophyll-a-Anregungsenergie auf den Farbstoff übertragen, bei 77 K sogar 85%. LHCII-Farbstoffkonstrukte können helfen, strukturelle und funktionelle Eigenschaften des LHCII näher zu beleuchten. So konnte bereits in dieser Arbeit gezeigt werden, daß der N-Terminus des Komplexes im zeitlichen Mittel in eine größere Annäherung zum pigmentierten Teil des LHCII kommen muß, sonst sind Energietransfereffizienzen obiger Größenordnung nicht möglich. Weitere Erkenntnisse werden von einzelmolekülspektroskopischen Untersuchungen erwartet. Voraussetzung hierfür ist jedoch eine orientierte Immobilisierung des LHCII auf einer Glasoberfläche. Es gelang, den Komplex über eine auf molekularer Ebene eingeführte Aminosäuresequenz aus sechs Histidinen an die Nickelchelatgruppe einer auf Glas immobilisierten Meerrettich-Peroxidase zu binden. Einzelmolekülspektroskopisch konnte eine LHCII-Immobilisation senkrecht zur Proteinsymmetrieachse nachgewiesen werden. Mittelfristig wird angestrebt, LHCII-Farbstoffkonstrukte auch für photovoltaische Anwendungen nutzbar zu machen. Ein erster Meilenstein wurde in dieser Arbeit erreicht, indem es gelang, LHCII an Titandioxid, Halbleiter der sog. Grätzelzelle, zu binden.

Amalgamersatz

Amalgamersatz:Neue Wege zur Herstellung von Dentalkompositen mit geringem Polymerisationsschrumpf auf (Meth-)Acrylat-Basis Aufgrund der ästhetischen und gesundheitlichen Bedenken wird seit Jahrzehnten nach einer Alternative für Amalgam als Zahnfüllmaterial gesucht. Der größte Nachteil von organischen Monomeren liegt in der Volumenkontraktion während der Aushärtung, welche sich negativ auf die Materialeigenschaften auswirkt. Aus diesem Grund war das Hauptziel dieser Arbeit, eine Minimierung des Schrumpfes bei der radikalischen Polymerisation zu erreichen. Dazu wurden verschiedene, zum Teil neue, (Meth-)Acrylate synthetisiert und auf ihre Einsetzbarkeit als Bestandteil von Dentalkompositen geprüft.Um die Volumenkontraktion während der Polymerisation zu minimieren, wurde die Beweglichkeit der polymerisierbaren Gruppe eingeschränkt. Im ersten Teil der Arbeit wurden dazu flüssigkristalline Substanzen eingesetzt. Durch Mischen von flüssigkristallinen Diacrylaten konnte eine Mesophase im gewünschten Temperaturintervall von 25 bis 35 °C erhalten werden. Der Einsatz dieser Flüssigkristalle zeigte einen positiven Einfluss auf den Polymerisationsschrumpf. Zudem wurden neue Monomere synthetisiert, deren Methacrylgruppe in direkter Nachbarschaft zum Mesogen angebunden wurde, um die Stabilität der erhaltenen Polymere zu erhöhen.Im zweiten Teil der Arbeit wurde die Beweglichkeit der polymerisierbaren Gruppe durch eine Fixierung an einem starren Kern reduziert. Als Grundkörper wurden Polyphenole, enzymatisch polymerisierte Phenole und ߖCyclodextrin verwendet. Bei den modifizierten Polyphenolen auf Basis von Gallussäure und 3,5-Dihydroxybenzoesäure konnte eine leichte Reduzierung des Polymerisationsschrumpfes erreicht werden. Mit HRP (Horseradish Peroxidase) katalysierten enzymatisch polymerisierten Phenole konnte dagegen nicht photochemisch vernetzt werden, da diese Oligomere in Lösung gefärbt vorlagen. Zudem zeigten die freien, phenolischen Hydroxygruppen eine sehr geringe Reaktivität. Die besten Ergebnisse wurden mit modifizierten ߖCyclodextrinen als Komponente einer Komposite erreicht. Dabei wurde in einem Fall sogar eine leichte Volumenexpansion während der Polymerisation erzielt.

Synthese funktionalisierter Phenolpolymere durch HRP-katalysierte Polyrekombination

ZUSAMMENFASSUNG: Die durch das Enzym Horseradish Peroxidase katalysierte oxidative Polymerisation substituierter Phenole gewährt einen bequemen Zugang zu funktionalisierten Phenolpolymeren, deren Anwendung als Ersatz für konventionelle Phenol-Formaldehyd-Harze zur Zeit intensiv erforscht wird. Zur Zeit werden Polymerisation dieser Art in Mischungen aus organischen Lösungsmitteln (z.B. 1,4-Dioxan) und Puffer durchgeführt. Im Rahmen dieser Arbeit wurde eine HRP-katalysierte Phenolpolymerisation von wasserunlöslichen Methacryloyl- und Maleinimid-substituierten Phenolen in 100% Pufferlösung durch die Verwendung von 2,6-methylierten Cyclodextrinen als carrier erreicht. Die so hergestellten Oligomere wurden mit Styrol und MMA copolymerisiert. Weitere Untersuchungen hatten die Synthese photoreaktiver Phenolpolymere mit Zimtsäure- oder Nitrongruppen in der Seitenkette, die Synthese thermisch vernetzbarer Phenolcopolymere aus Furan-2-carboxylsäure-(4-hydroxy-phenyl)-amid und N-methacryloyl-11-aminoundecanoyl-4-hydroxyanilid sowie die Synthese eines Redoxpolymeren ausgehend von 4-Aminophenol zum Ziel. Daneben wurden Strategien zur enzymatisch katalysierten Synthese von Poly[para-phenylenen], hyperverzweigten Phenolpolymeren und biologisch aktiven Phenolpolymeren entwickelt, und detaillierte Untersuchungen zum Polymerisationsmechanismus und zur Struktur der entstehenden Phenolpolymere vorgestellt. Die vorgestellten Phenolpolymere bestehen hoechstwahrscheinlich aus polyaromatischen Helices, da diese p-substituierten Phenole während des Rekombinationsprozesses bevorzugt an den ortho-Positionen rekombinieren.

Assembly and characterization of supramolecular architectures for biosensor applications

The research has included the efforts in designing, assembling and structurally and functionally characterizing supramolecular biofunctional architectures for optical biosensing applications. In the first part of the study, a class of interfaces based on the biotin-NeutrAvidin binding matrix for the quantitative control of enzyme surface coverage and activity was developed. Genetically modified ß-lactamase was chosen as a model enzyme and attached to five different types of NeutrAvidin-functionalized chip surfaces through a biotinylated spacer. All matrices are suitable for achieving a controlled enzyme surface density. Data obtained by SPR are in excellent agreement with those derived from optical waveguide measurements. Among the various protein-binding strategies investigated in this study, it was found that stiffness and order between alkanethiol-based SAMs and PEGylated surfaces are very important. Matrix D based on a Nb2O5 coating showed a satisfactory regeneration possibility. The surface-immobilized enzymes were found to be stable and sufficiently active enough for a catalytic activity assay. Many factors, such as the steric crowding effect of surface-attached enzymes, the electrostatic interaction between the negatively charged substrate (Nitrocefin) and the polycationic PLL-g-PEG/PEG-Biotin polymer, mass transport effect, and enzyme orientation, are shown to influence the kinetic parameters of catalytic analysis. Furthermore, a home-built Surface Plasmon Resonance Spectrometer of SPR and a commercial miniature Fiber Optic Absorbance Spectrometer (FOAS), served as a combination set-up for affinity and catalytic biosensor, respectively. The parallel measurements offer the opportunity of on-line activity detection of surface attached enzymes. The immobilized enzyme does not have to be in contact with the catalytic biosensor. The SPR chip can easily be cleaned and used for recycling. Additionally, with regard to the application of FOAS, the integrated SPR technique allows for the quantitative control of the surface density of the enzyme, which is highly relevant for the enzymatic activity. Finally, the miniaturized portable FOAS devices can easily be combined as an add-on device with many other in situ interfacial detection techniques, such as optical waveguide lightmode spectroscopy (OWLS), the quartz crystal microbalance (QCM) measurements, or impedance spectroscopy (IS). Surface plasmon field-enhanced fluorescence spectroscopy (SPFS) allows for an absolute determination of intrinsic rate constants describing the true parameters that control interfacial hybridization. Thus it also allows for a study of the difference of the surface coupling influences between OMCVD gold particles and planar metal films presented in the second part. The multilayer growth process was found to proceed similarly to the way it occurs on planar metal substrates. In contrast to planar bulk metal surfaces, metal colloids exhibit a narrow UV-vis absorption band. This absorption band is observed if the incident photon frequency is resonant with the collective oscillation of the conduction electrons and is known as the localized surface plasmon resonance (LSPR). LSPR excitation results in extremely large molar extinction coefficients, which are due to a combination of both absorption and scattering. When considering metal-enhanced fluorescence we expect the absorption to cause quenching and the scattering to cause enhancement. Our further study will focus on the developing of a detection platform with larger gold particles, which will display a dominant scattering component and enhance the fluorescence signal. Furthermore, the results of sequence-specific detection of DNA hybridization based on OMCVD gold particles provide an excellent application potential for this kind of cheap, simple, and mild preparation protocol applied in this gold fabrication method. In the final chapter, SPFS was used for the in-depth characterizations of the conformational changes of commercial carboxymethyl dextran (CMD) substrate induced by pH and ionic strength variations were studied using surface plasmon resonance spectroscopy. The pH response of CMD is due to the changes in the electrostatics of the system between its protonated and deprotonated forms, while the ionic strength response is attributed from the charge screening effect of the cations that shield the charge of the carboxyl groups and prevent an efficient electrostatic repulsion. Additional studies were performed using SPFS with the aim of fluorophore labeling the carboxymethyl groups. CMD matrices showed typical pH and ionic strength responses, such as high pH and low ionic strength swelling. Furthermore, the effects of the surface charge and the crosslink density of the CMD matrix on the extent of stimuli responses were investigated. The swelling/collapse ratio decreased with decreasing surface concentration of the carboxyl groups and increasing crosslink density. The study of the CMD responses to external and internal variables will provide valuable background information for practical applications.

Neurons derived from P19 embryonic carcinoma cells as a platform for biosensor applications - optimisation and characterisation

P19 is a mouse-derived embryonal carcinoma cell line capable of differentiation toward ectodermal, mesodermal and endodermal lineages and could thus be differentiated into neurons. Different culture conditions were tested to optimise and increase the efficiency of neuronal differentiation since the population of P19-derived neurons was reported to be heterogeneous with respect to the morphology and neurotransmitters they synthesise. P19-derived neurons were cultured on microelectrode arrays as cell aggregates and as dissociated cells. Improved neuronal maturation was shown by the presence of microtubule associated protein 2, neurofilament and synaptophysin formation when initiation of neuronal differentiation was prolonged. High initial cell density cultures and coating of surfaces with polyethylenimine-laminin further improved neuronal maturation of differentiated P19 cells. Increased spontaneous activities of the P19-derived neurons were correspondingly recorded. Two to three hours recordings were performed between 17 and 25 days when extracellular signals were stabilised. It was found that P19-derived neurons developed network properties as partially synchronised network activities. P19-derived neurons appeared to give inhomogenous response to the 2 major neurotransmitters, -aminobutyric acid (GABA) and glutamate. The P19-derived neuronal networks obtained from optimised protocol in this thesis were predominantly GABAergic. The reproducible long term extracellular recordings performed showed that neurons derived from P19 embryonal carcinoma cells could be applied as a model for cell based biosensor in corporation with microelectrode arrays.

New biosensor applications of surface plasmon and hydrogel optical waveguide spectroscopy

Rapid and sensitive detection of chemical and biological analytes becomes increasingly important in areas such as medical diagnostics, food control and environmental monitoring. Optical biosensors based on surface plasmon resonance (SPR) and optical waveguide spectroscopy have been extensively pushed forward in these fields. In this study, we combine SPR, surface plasmon-enhanced fluorescence spectroscopy (SPFS) and optical waveguide spectroscopy with hydrogel thin film for highly sensitive detection of molecular analytes.rnrnA novel biosensor based on SPFS which was advanced through the excitation of long range surface plasmons (LRSPs) is reported in this study. LRSPs are special surface plasmon waves propagating along thin metal films with orders of magnitude higher electromagnetic field intensity and lower damping than conventional SPs. Therefore, their excitation on the sensor surface provides further increased fluorescence signal. An inhibition immunoassay based on LRSP-enhanced fluorescence spectroscopy (LRSP-FS) was developed for the detection of aflatoxin M1 (AFM1) in milk. The biosensor allowed for the detection of AFM1 in milk at concentrations as low as 0.6 pg mL-1, which is about two orders of magnitude lower than the maximum AFM1 residue level in milk stipulated by the European Commission legislation.rnrnIn addition, LRSPs probe the medium adjacent to the metallic surface with more extended evanescent field than regular SPs. Therefore, three-dimensional binding matrices with up to micrometer thickness have been proposed for the immobilization of biomolecular recognition elements with large surface density that allows to exploit the whole evanescent field of LRSP. A photocrosslinkable carboxymethyl dextran (PCDM) hydrogel thin film is used as a binding matrix, and it is applied for the detection of free prostate specific antigen (f-PSA) based on the LRSP-FS and sandwich immunoassay. We show that this approach allows for the detection of f-PSA at low femto-molar range, which is approximately four orders of magnitude lower than that for direct detection of f-PSA based on the monitoring of binding-induced refractive index changes.rnrnHowever, a three dimensional hydrogel binding matrix with micrometer thickness can also serve as an optical waveguide. Based on the measurement of binding-induced refractive index changes, a hydrogel optical waveguide spectroscopy (HOWS) is reported for a label-free biosensor. This biosensor is implemented by using a SPR optical setup in which a carboxylated poly(N-isoproprylacrylamide) (PNIPAAm) hydrogel film is attached on a metallic surface and modified by protein catcher molecules. Compared to regular SPR biosensor with thiol self-assembled monolayer (SAM), HOWS provides an order of magnitude improved resolution in the refractive index measurements and enlarged binding capacity owing to its low damping and large swelling ratio, respectively. A model immunoassay experiment revealed that HOWS allowed detection of IgG molecules with a 10 pM limit of detection (LOD) that was five-fold lower than that achieved for SPR with thiol SAM. For the high capacity hydrogel matrix, the affinity binding was mass transport limited.rnrnThe mass transport of target molecules to the sensor surface can play as critical a role as the chemical reaction itself. In order to overcome the diffusion-limited mass transfer, magnetic iron oxide nanoparticles were employed. The magnetic nanoparticles (MNPs) can serve both as labels providing enhancement of the refractive index changes, and “vehicles” for rapidly delivering the analytes from sample solution to an SPR sensor surface with a gradient magnetic field. A model sandwich assay for the detection of β human chorionic gonadotropin (βhCG) has been utilized on a gold sensor surface with metallic diffraction grating structure supporting the excitation of SPs. Various detection formats including a) direct detection, b) sandwich assay, c) MNPs immunoassay without and d) with applied magnetic field were compared. The results show that the highly-sensitive MNPs immunoassay improves the LOD on the detection of βhCG by a factor of 5 orders of magnitude with respect to the direct detection.rn