Analisi di un'architettura Multi-Master ad alta affidabilità basata su MariaDB Galera Cluster

Progettazione, realizzazione ed analisi prestazionale e di robustezza di un sistema di cluster ad alta affidabilità basato su MariaDB Galera Cluster. Affiancamento al cluster di un sistema di proxy MaxScale. Studio e realizzazione di una procedura di migrazione da DBMS MySQL a MariaDB Galera Cluster.

Modelling and simulating in systems biology: an approach based on multi-agent systems

Systems Biology is an innovative way of doing biology recently raised in bio-informatics contexts, characterised by the study of biological systems as complex systems with a strong focus on the system level and on the interaction dimension. In other words, the objective is to understand biological systems as a whole, putting on the foreground not only the study of the individual parts as standalone parts, but also of their interaction and of the global properties that emerge at the system level by means of the interaction among the parts. This thesis focuses on the adoption of multi-agent systems (MAS) as a suitable paradigm for Systems Biology, for developing models and simulation of complex biological systems. Multi-agent system have been recently introduced in informatics context as a suitabe paradigm for modelling and engineering complex systems. Roughly speaking, a MAS can be conceived as a set of autonomous and interacting entities, called agents, situated in some kind of nvironment, where they fruitfully interact and coordinate so as to obtain a coherent global system behaviour. The claim of this work is that the general properties of MAS make them an effective approach for modelling and building simulations of complex biological systems, following the methodological principles identified by Systems Biology. In particular, the thesis focuses on cell populations as biological systems. In order to support the claim, the thesis introduces and describes (i) a MAS-based model conceived for modelling the dynamics of systems of cells interacting inside cell environment called niches. (ii) a computational tool, developed for implementing the models and executing the simulations. The tool is meant to work as a kind of virtual laboratory, on top of which kinds of virtual experiments can be performed, characterised by the definition and execution of specific models implemented as MASs, so as to support the validation, falsification and improvement of the models through the observation and analysis of the simulations. A hematopoietic stem cell system is taken as reference case study for formulating a specific model and executing virtual experiments.

The velocity dispersion profile of the globular cluster 47Tucanae

Gli ammassi globulari rappresentano i laboratori ideali nei quali studiare la dinamica di sistemi ad N-corpi ed i suoi effetti sull’evoluzione stellare. Infatti, gli ammassi globulari sono gli unici sistemi astrofisici che, entro il tempo scala dell’età dell’Universo, sperimentano quasi tutti i processi di dinamica stellare noti. Questo lavoro di tesi si inserisce in un progetto a lungo termine volto a fornire una dettagliata caratterizzazione delle proprietà dinamiche degli ammassi globulari galattici. In questa ricerca, strumenti di fondamentale importanza sono il profilo di dispersione di velocità del sistema e la sua curva di rotazione. Per determinare le componenti radiali di questi profili cinematici in ammassi globulari galattici è necessario misurare la velocità lungo la linea di vista di un ampio campione di stelle membre, a differenti distanze dal centro. Seguendo un approccio multi-strumentale, è possibile campionare l’intera estensione radiale dell’ammasso utilizzando spettrografi multi-oggetto ad alta risoluzione spettrale nelle regioni intermedie/esterne, e spettrografi IFU con ottiche adattive per le regioni centrali (pochi secondi d’arco dal centro). Questo lavoro di tesi è volto a determinare il profilo di dispersione di velocità dell’ammasso globulare 47 Tucanae, campionando un’estensione radiale compresa tra circa 20'' e 13' dal centro. Per questo scopo sono state misurate le velocità radiali di circa un migliaio di stelle nella direzione di 47 Tucanae, utilizzando spettri ad alta risoluzione ottenuti con lo spettrografo multi-oggetto FLAMES montato al Very Large Telescope dell’ESO. Le velocità radiali sono state misurate utilizzando la tecnica di cross-correlazione tra gli spettri osservati e appropriati spettri teorici, e sono state ottenute accuratezze inferiori a 0.5km/s. Il campione così ottenuto (complementare a quello raccolto con strumenti IFU nelle regioni centrali) è fondamentale per costruire il profilo di dispersione di velocità dell’ammasso e la sua eventuale curva di rotazione. Questi dati, combinati col profilo di densità dell’ammasso precedentemente determinato, permetteranno di vincolare opportunamente modelli teorici come quelli di King (1966) o di Wilson (1975), e di arrivare così alla prima solida determinazione dei parametri strutturali e dinamici (raggi di core e di metà massa, tempo di rilassamento, parametro collisionale, etc.) e della massa totale e distribuzione di massa del sistema.

Galactic fountain flows in high-resolution hydrodynamical simulations of galaxy disks

Feedback from the most massive components of a young stellar cluster deeply affects the surrounding ISM driving an expanding over-pressured hot gas cavity in it. In spiral galaxies these structures may have sufficient energy to break the disk and eject large amount of material into the halo. The cycling of this gas, which eventually will fall back onto the disk, is known as galactic fountains. We aim at better understanding the dynamics of such fountain flow in a Galactic context, frame the problem in a more dynamic environment possibly learning about its connection and regulation to the local driving mechanism and understand its role as a metal diffusion channel. The interaction of the fountain with a hot corona is hereby analyzed, trying to understand the properties and evolution of the extraplanar material. We perform high resolution hydrodynamical simulations with the moving-mesh code AREPO to model the multi-phase ISM of a Milky Way type galaxy. A non-equilibrium chemical network is included to self consistently follow the evolution of the main coolants of the ISM. Spiral arm perturbations in the potential are considered so that large molecular gas structures are able to dynamically form here, self shielded from the interstellar radiation field. We model the effect of SN feedback from a new-born stellar cluster inside such a giant molecular cloud, as the driving force of the fountain. Passive Lagrangian tracer particles are used in conjunction to the SN energy deposition to model and study diffusion of freshly synthesized metals. We find that both interactions with hot coronal gas and local ISM properties and motions are equally important in shaping the fountain. We notice a bimodal morphology where most of the ejected gas is in a cold $10^4$ K clumpy state while the majority of the affected volume is occupied by a hot diffuse medium. While only about 20\% of the produced metals stay local, most of them quickly diffuse through this hot regime to great scales.

Feasibility study and flow scheduling optimization of a multi-product pipeline system

The first goal of this study is to analyse a real-world multiproduct onshore pipeline system in order to verify its hydraulic configuration and operational feasibility by constructing a simulation model step by step from its elementary building blocks that permits to copy the operation of the real system as precisely as possible. The second goal is to develop this simulation model into a user-friendly tool that one could use to find an “optimal” or “best” product batch schedule for a one year time period. Such a batch schedule could change dynamically as perturbations occur during operation that influence the behaviour of the entire system. The result of the simulation, the ‘best’ batch schedule is the one that minimizes the operational costs in the system. The costs involved in the simulation are inventory costs, interface costs, pumping costs, and penalty costs assigned to any unforeseen situations. The key factor to determine the performance of the simulation model is the way time is represented. In our model an event based discrete time representation is selected as most appropriate for our purposes. This means that the time horizon is divided into intervals of unequal lengths based on events that change the state of the system. These events are the arrival/departure of the tanker ships, the openings and closures of loading/unloading valves of storage tanks at both terminals, and the arrivals/departures of trains/trucks at the Delivery Terminal. In the feasibility study we analyse the system’s operational performance with different Head Terminal storage capacity configurations. For these alternative configurations we evaluated the effect of different tanker ship delay magnitudes on the number of critical events and product interfaces generated, on the duration of pipeline stoppages, the satisfaction of the product demand and on the operative costs. Based on the results and the bottlenecks identified, we propose modifications in the original setup.