Solid state micro and nanopore sensors for single entity detection

A general description of the work presented in this thesis can be divided into three areas of interest: micropore fabrication, nanopore modification, and their applications. The first part of the thesis is related to the novel, reliable, cost-effective, potable, mass-productive, robust, and ease of use micropore flowcell that works based on the RPS technique. Based on our first goal, which was finding an alternate materials and processes that would shorten production times while lowering costs and improving signal quality, the polyimide film was used as a substrate to create precise pores by femtosecond laser, and the resulting current blockades of different sizes of the nanoparticles were recorded. Based on the results, the device can detecting nano-sized particles by changing the current level. The experimental and theoretical investigation, scanning electron microscopy, and focus ion beam were performed to explain the micropore's performance. The second goal was design and fabrication of a leak-free, easy-to-assemble, and portable polymethyl methacrylate flowcell for nanopore experiments. Here, ion current rectification was studied in our nanodevice. We showed a self-assembly-based, controllable, and monitorable in situ Poly(l-lysine)- g-poly(ethylene glycol) coating method under voltage-driven electrolyte flow and electrostatic interaction between nanopore walls and PLL backbones. Using designed nanopore flowcell and in situ monolayer PLL-g-PEG functionalized 20±4 nm SiN nanopores, we observed non-sticky α-1 anti-trypsin protein translocation. additionally, we could show the enhancement of translocation events through this non-sticky nanopore, and also, estimate the volume of the translocated protein. In this study, by comparing the AAT protein translocation results from functionalized and non-functionalized nanopore we demonstrated the 105 times dwell time reduction (31-0.59ms), 25% amplitude enhancement (0.24-0.3 nA), and 15 times event’s number increase (1-15events/s) after functionalization in 1×PBS at physiological pH. Also, the AAT protein volume was measured, close to the calculated AAT protein hydrodynamic volume and previous reports.

Studies on the interaction of surfactants and neutral cyclodextrins by capillary electrophoresis. Application to chiral analysis

In the present study, mixed systems composed of SDS in the presence of neutral cyclodextrins were considered. Firstly, the effect of the CDs on the CMC of the surfactant was evaluated by CE experiments. Furthermore, a new CE approach based on electric current measurement was developed for the estimation of the stoichiometry as well as of the binding constants of SDS-CDs complexes. The results of these investigations were compared to those obtained with a different technique, electronic paramagnetic resonance (EPR). The obtained results suggested that methylated CDs, in particular (2,6-di-O-methyl)-beta-cyclodextrin (DM-beta-CD), strongly affect the micellization of SDS in comparison to the other studied CDs. This effect also paralleled the chiral CD-MEKC performance, as indicated by the enantioresolution of (+/-)-Catechin, which was firstly selected as a model compound representative of important chiral phytomarkers. Then a CD-MEKC system, composed of sodium dodecyl sulfate as surfactant (90 mM) and hydroxypropyl-beta-cyclodextrin (25 mM) as chiral selector, under acidic conditions (25 mM borate – phosphate buffer, pH 2.5) was applied to study the thermal epimerisation of epi-structured catechins, (-)-Epicatechin and (-)-Epigallocatechin, to non epi-structured (-)-Catechin and (-)-Gallocatechin. The latter compounds, being non-native molecules, were for the first time regarded as useful phytomarkers of tea sample degradation. The proposed method was applied to the analysis of more than twenty tea samples of different geographical origins (China, Japan, Ceylon), having undergone different storage conditions and manufacturing processes.

Search for direct CP violation in charm neutral meson decays at LHCb

A search for time-integrated violation of the CP symmetry, ACP(K−K+), in the Cabibbo-suppressed D0 → K−K+ decays is performed at the LHCb detector using proton- proton collisions recorded from 2015 to 2018 at the centre of mass energy of 13 TeV. The data used corresponds to an integrated luminosity of 5.7 fb−1. The flavour of the charm mesons is defined from the charge of the pion in D∗+ → D0π+ and D∗− → D0π− decays. Nuisance asymmetries are constrained from D∗+ → D0(→ K−π+)π+, D+ → KS0π+, D+ → K−π+π+, Ds+ → KS0K+ and Ds+ → φπ+ decays. The ACP(K−K+) asymme- try is measured to be ACP (K−K+) = (6.8 ± 5.4 (stat) ± 1.6 (syst)) · 10−4, in agreement with the previous LHCb results and the current world average. This represents the world’s most precise measurement of this quantity to date. Combining ACP (K−K+) with the time-integrated CP asymmetry difference, ∆ACP = ACP (K−K+)− ACP (π−π+), and the time-dependent CP asymmetry, ∆Y , measured with D0 → K−K+ and D0 → π−π+ decays, the direct CP asymmetries in D0 → K−K+ and D0 → π−π+ decays, adKK and adππ, result to be adKK =(7.7±5.7)·10−4, adππ =(23.2±6.1)·10−4, where the errors include systematic and statistical uncertainties and the correlation be- tween the two values is ρ(adKK,adππ) = 0.88. The values differ from zero for 1.4 and 3.8 standard deviations, respectively. In particular, adππ shows an evidence for direct CP violation in D0 → π−π+ decays.