Modeling physiological processes in plankton on enzyme kinetic principles

[EN] Many ecologically important chemical transformations in the ocean are controlled by biochemical enzyme reactions in plankton. Nitrogenase regulates the transformation of N2 to ammonium in some cyanobacteria and serves as the entryway for N2 into the ocean biosphere. Nitrate reductase controls the reduction of NO3 to NO2 and hence new production in phytoplankton. The respiratory electron transfer system in all organisms links the carbon oxidation reactions of intermediary metabolism with the reduction of oxygen in respiration. Rubisco controls the fixation of CO2 into organic matter in phytoplankton and thus is the major entry point of carbon into the oceanic biosphere. In addition to these, there are the enzymes that control CO2 production, NH4 excretion and the fluxes of phosphate. Some of these enzymes have been recognized and researched by marine scientists in the last thirty years. However, until recently the kinetic principles of enzyme control have not been exploited to formulate accurate mathematical equations of the controlling physiological expressions. Were such expressions available they would increase our power to predict the rates of chemical transformations in the extracellular environment of microbial populations whether this extracellular environment is culture media or the ocean. Here we formulate from the principles of bisubstrate enzyme kinetics, mathematical expressions for the processes of NO3 reduction, O2 consumption, N2 fixation, total nitrogen uptake.

Avances en ecofisiología planctónica y oceanografía bioquímica en la ULPGC

[EN] This seminar will report the latest activities of the ULPGC»s Plankton Ecophysiology group (PEG). This group studies respiration, growth, nitrogen metabolism, oceanic carbon flux, deep ocean metabolism, and plankton cultivation. It works with zooplankton, phytoplankton, bacteria, and macroalgae. The premise behind the group»s investigations is that enzyme biochemistry controls an organism»s physiology that, in turn, has a strong impact on ocean chemistry and ecology. This research team (PEG) uses as foils, the metabolic theory of ecology (MTE) and Kleiber»s law to argue the fact that respiratory metabolism is controlled not by biomass, but by the respiratory electron transport system (R-ETS). It has pointed out that the reason, zooplankton respiration statistically correlates with biomass, is because biomass packages mitochondria and mitochondria package the R-ETS. It has demonstrated, experimentally with Artemia salina, the superiority of using ETS as a respiration proxy rather than using biomass. Working with bacteria it has shown the inadequacy of the MTE in describing respiration in different growth phases of bacteria and has shown that a rival model based on enzyme kinetics works much better.