Population biology of Uca thayeri Rathbun, 1900 (Brachyura, Ocypodidae) in a subtropical South American mangrove area: Results from transect and catch-per-unit-effort techniques

The population biology of Uca thayeri was studied in a subtropical mangrove in Ubatuba, State of São Paulo, Brazil. Two sampling techniques were used: transect sampling and catch-per-unit-effort. Size frequency distribution, sex-ratio, and reproductive period were analysed. For juvenile crabs (CW < 4.6 mm), the transect procedure was most efficient, while ovigerous females were most collected during the capture effort. Males were most numerous in the transect technique, while in the catch-per-unit-effort there was no difference between sexes. The species showed a different size frequency distribution for each sampling procedure. The reproduction of U. thayeri is seasonal, being more pronounced in the warmer months of the year. However, juveniles occurred all over the year, although more numerous in the colder months. The success of the species in reproductive activity and the constant colonization of the area can be attributed to the availability of food resources and differential occupation of the habitat by ovigerous females.

Distribuição espacial de Alabama argillacea (Hübner) (Lepidoptera: Noctuidae) em algodoeiro

O conhecimento do modelo de distribuição espacial de pragas na cultura é fundamental para estabelecer um plano adequado de amostragem seqüencial e, assim, permitir a correta utilização das estratégias de controle e a otimização das técnicas de amostragem. Esta pesquisa objetivou estudar a distribuição espacial de lagartas de Alabama argillacea (Hübner) na cultura do algodoeiro, cultivar CNPA ITA-90. A coleta de dados ocorreu durante o ano agrícola de 1998/99 na Fazenda Itamarati Sul S.A., localizada no município de Ponta Porã, MS, em três diferentes áreas de 10.000 m² cada uma. Cada área amostral foi composta de 100 parcelas com 100 m² cada. Foi realizada semanalmente a contagem das lagartas pequenas, médias e grandes, encontradas em cinco plantas por parcela. Os índices de agregação (razão variância/média e índice de Morisita), o teste de qui-quadrado com o ajuste dos valores encontrados e esperados às distribuições teóricas de freqüência (Poisson, binomial positiva e binomial negativa), mostraram que todos os estádios das lagartas estão distribuídos de acordo com o modelo de distribuição contagiosa, ajustando-se ao padrão da Distribuição Binomial Negativa durante todo o período de infestação.

Non invasive methods for genetic analysis applied to ecological and behavioral studies in Latino-America

Documenting the presence and abundance of the neotropical mammals is the first step for understanding their population ecology, behavior and genetic dynamics in designing conservation plans. The combination of field research with molecular genetics techniques are new tools that provide valuable biological information avoiding the disturbance in the ecosystems, trying to minimize the human impact in the process to gather biological information. The objective of this paper is to review the available non invasive sampling techniques that have been used in Neotropical mammal studies to apply to determine the presence and abundance, population structure, sex ratio, taxonomic diagnostic using mitochondrial markers, and assessing genetic variability using nuclear markers. There are a wide range of non invasive sampling techniques used to determine the species identification that inhabit an area such as searching for tracks, feces, and carcasses. Other useful equipment is the camera traps that can generate an image bank that can be valuable to assess species presence and abundance by morphology. With recent advances in molecular biology, it is now possible to use the trace amounts of DNA in feces and amplify it to analyze the species diversity in an area, and the genetic variability at intraspecific level. This is particularly helpful in cases of sympatric and cryptic species in which morphology failed to diagnose the taxonomic status of several species of brocket deer of the genus Mazama.

Multidimensional cluster stability analysis from a Brazilian Bradyrhizobium sp RFLP/PCR data set

The taxonomy of the N(2)-fixing bacteria belonging to the genus Bradyrhizobium is still poorly refined, mainly due to conflicting results obtained by the analysis of the phenotypic and genotypic properties. This paper presents an application of a method aiming at the identification of possible new clusters within a Brazilian collection of 119 Bradryrhizobium strains showing phenotypic characteristics of B. japonicum and B. elkanii. The stability was studied as a function of the number of restriction enzymes used in the RFLP-PCR analysis of three ribosomal regions with three restriction enzymes per region. The method proposed here uses Clustering algorithms with distances calculated by average-linkage clustering. Introducing perturbations using sub-sampling techniques makes the stability analysis. The method showed efficacy in the grouping of the species B. japonicum and B. elkanii. Furthermore, two new clusters were clearly defined, indicating possible new species, and sub-clusters within each detected cluster. (C) 2008 Elsevier B.V. All rights reserved.

Coagglutination for viral DNA preparation of canine parvovirus for molecular diagnosis

Fundação de Amparo à Pesquisa do Estado de São Paulo (FAPESP)

Deficiência visual, auditiva e física: prevalência e fatores associados em estudo de base populacional

O estudo descreve as prevalências de deficiências segundo características demográficas e sócio-econômicas, bem como as suas causas. A pesquisa utilizou dados de inquéritos de base populacional realizados em áreas do Estado de São Paulo, Brasil, em 2002 e 2003, com amostragem estratificada por conglomerados. Os entrevistados que referiram deficiências foram a população estudada segundo as variáveis que compõem o banco de dados. A prevalência de alguma deficiência foi de 110,8 ; deficiência visual, 62 ; deficiência auditiva, 44 e a deficiência física de 13,3 . As prevalências das deficiências variaram com a idade; sexo e escolaridade. A prevalência de deficiências auditiva e física foi maior entre os homens. A principal causa das deficiências foi a doença. As causas externas também foram umas das principais causadoras de incapacidades. As deficiências aumentaram com a idade, foram mais prevalentes em mulheres e em pessoas com menor escolaridade, sendo sua principal causa as doenças e as causas externas.

Balanço de espécies químicas em microbacias sob utilização agrícola - região de Botucatu/SP

Pós-graduação em Agronomia (Energia na Agricultura) - FCA

Avaliação da membrana P81 como agente ligante da técnica de difusão em filmes finos por gradiente de concentração (DGT) para determinação de mercúrio em sistemas aquáticos

Worldwide environmental degradation is an undesirable byproduct resulting from the increasing demand for natural resources. Water sources are suffering intense contamination since they usually receive a huge amount of domestic and industrial effluents - which are mostly wasted without proper treatment - inserting a large number of pollutants in the environment, heavy metals included. Mercury holds great toxicological importance because, under some physicochemical conditions in a water environment, Hg (II) ion turns into methylated compounds stemming from this element, such as methylmercury CH3Hg, which is highly toxic for the aquatic community in which bioaccumulation occurs. Nowadays passive sampling techniques are being developed to enable the analytical procedures which are applied in environmental monitoring. Diffusive gradients in thin-films technique (DGT) has been proven an interesting tool for the determination of labile metal species due to its in situ application. The DGT technique consists of a piston-like device on which the following series of agents is disposed: a binding agent (conventionally Chelex 100 resin), a diffusive agent, usually a polyacrylamide gel, and a membrane filter. Nevertheless, the agents conventinally used for this technique don't usually show satisfactory results in mercury sampling. The main goal of this study was to evaluate the phosphate-treated cellulose membrane (Whatman P 81), an alternative material, as binding agent in the DGT to determine labile mercury fractions in aquatic systems. In this context, we conducted a study of the behavior of this material in relation with system variables, pH and ionic strength. Afterwards we performed immersions of the DGT devices in real and enriched samples and in situ aiming the determination of mercury

Análise geoestatística para geração de superfícies a partir de dados de clorofila-a adquiridos em transectos

Coordenação de Aperfeiçoamento de Pessoal de Nível Superior (CAPES)

Identification of the endangered small red brocket deer (Mazama bororo) using noninvasive genetic techniques (Mammalia; Cervidae)

Fundação de Amparo à Pesquisa do Estado de São Paulo (FAPESP)

Geoenvironmental site investigation using different techniques in a municipal solid waste disposal site in Brazil

Different geoenvironmental site investigation techniques to assess contamination from a municipal solid waste disposal site in Brazil are presented here. Superficial geophysical investigation (geoelectrical survey), resistivity piezocone penetration tests (RCPTU), soil samples collected with direct-push samplers and water samples collected from monitoring wells were applied in this study. The application of the geoelectrical method was indispensable to identify the presence and flow direction of contamination plumes (leachate) as well as to indicate the most suitable locations for RCPTU tests and soil and water sampling. Chemical analyses of groundwater samples contributed to a better understanding of the flow of the contaminated plume. The piezocone presented some limitations for tropical soils, since the groundwater level is sometimes deeper than the layer which is impenetrable to the cone, and the soil genesis and unsaturated conditions affect soil behavior. The combined interpretation of geoelectrical measurements and soil and water samplings underpinned the interpretation of RCPTU tests. The interpretation of all the test results indicates that the contamination plume has already overreached the landfill's west-northwest borders. Geoenvironmental laboratory test results suggest that contamination from the solid waste disposal site has been developing gradually, indicating the need for continuous monitoring of the groundwater.

Evaluation of survey methods for sampling anuran species richness in the neotropics.

Species richness is central to ecological theory, with practical applications in conservation, environmental management and monitoring. Several techniques are available for measuring species richness and composition of amphibians in breeding pools, but the relative efficacy of these methods for sampling high-diversity Neotropical amphibian fauna is poorly understood. I evaluated seven studies from south and south-eastern Brazil to compare the relative and combined effectiveness of two methods for measuring species richness at anuran breeding pools: acoustic surveys with visual encounter of adults and dipnet surveys of larvae. I also compared the relative efficacy of each survey method in detecting species with different reproductive modes. Results showed that both survey methods underestimated the number of species when used separately; however, a close approximation of the actual number of species in each breeding pool was obtained when the methods were combined. There was no difference between survey methods in detecting species with different reproductive modes. These results indicate that researchers should employ multiple survey methods that target both adult and larval life history stages in order to accurately assess anuran species richness at breeding pools in the Neotropics.

Qualitative analysis of two reconstruction techniques and their application in dentistry

Although visualization in the field of dentistry has some of the same requirements as the medicine field, the differences in goal demand specific approaches. This paper reports on the implementation of two fundamentally different approaches to reconstruction of structures from planar cross sections and their application to dentistry data. One of the approaches was an implementation of a distance-based sampling technique, and the other is a new algorithm, based on the Delaunay triangulation. Both were tested using contour data of teeth and the results are compared here in the light of the target applications, which are teaching and training dentistry, as well as simulation of dental procedures and illnesses. Widely mentioned problems encountered in local reconstruction methods such as marching cubes for these cases are clearly illustrated in this paper, and a very satisfactory alternative is given. © 2000 SPIE and IS&T.