New LLLT protocol to speed up the bone healing process-histometric and immunohistochemical analysis in rat calvarial bone defect

Conselho Nacional de Desenvolvimento Científico e Tecnológico (CNPq)

A nature-inspired approach to speed up optimum-path forest clustering and its application to intrusion detection in computer networks

Fundação de Amparo à Pesquisa do Estado de São Paulo (FAPESP)

Computational speed-up with a single qudit

Fundação de Amparo à Pesquisa do Estado de São Paulo (FAPESP)

Utilização do teste de raios - x na avaliação dos efeitos da dessecação e infestação em diásporos de Canela-Batalha - Cryptocarya aschersoniana Mez (Lauraceae)

No presente trabalho, objetivou-se avaliar os efeitos da dessecação e identificar lesões por predação por insetos, em diásporos de canela-batalha (Cryptocarya aschersoniana Mez.), utilizando-se testes de raios X. Os danos provocados pela dessecação foram dimensionados nas imagens e associados à formação de plântulas. Diásporos recém-beneficiados (45 % de umidade e 37 % de germinação) foram colocados para secar em sala climatizada (20 ºC e 60 % UR), dentro de bandejas plásticas em camada única. Posteriormente, com o intuito de acelerar o processo de secagem, foram colocados em caixas de secagem com solução saturada de hidróxido de sódio (28 % UR) e amostrados com 45, 37, 35, 31 e 26 % de umidade. Para as radiografias, utilizou-se a intensidade de radiação de 40 kVp e tempo de exposição de 1,5 minutos. Posteriormente, as radiografias foram fotografadas e as imagens analisadas em computador, sendo medido o afastamento entre o endocarpo e a semente. As sementes foram classificadas em sementes intactas, sementes com afastamento parcial, sementes com afastamento total e sementes predadas. Os testes de germinação foram realizados sobre areia, em germinadores tipo Mangelsdorf a 25 ºC e luz branca constante. Pelos resultados, observa-se que a germinação é comprometida quando o teor de água das sementes fica abaixo de 26 %. Nesse ponto, o afastamento entre o endocarpo e a semente é de 0,65 mm. Houve uma correlação positiva entre a viabilidade das sementes, avaliada pelo teste de germinação, e o afastamento entre o endocarpo e a semente observado nas radiografias. A análise radiográfica possibilita identificar danos provocados por predação após infestação por insetos.

HOW TO EFFICIEN TLY INCORPORATE FACTS DEVICES IN OPTIMAL ACTIVE POWER FLOW MODEL

This paper presents for the first time how to easily incorporate facts devices in an optimal active power flow model such that an efficient interior-point method may be applied. The optimal active power flow model is based on a network flow approach instead of the traditional nodal formulation that allows the use of an efficiently predictor-corrector interior point method speed up by sparsity exploitation. The mathematical equivalence between the network flow and the nodal models is addressed, as well as the computational advantages of the former considering the solution by interior point methods. The adequacy of the network flow model for representing facts devices is presented and illustrated on a small 5-bus system. The model was implemented using Matlab and its performance was evaluated with the 3,397-bus and 4,075-branch Brazilian power system which show the robustness and efficiency of the formulation proposed. The numerical results also indicate an efficient tool for optimal active power flow that is suitable for incorporating facts devices.

Molecular models of NS3 protease variants of the Hepatitis C virus

Background: Hepatitis C virus (HCV) currently infects approximately three percent of the world population. In view of the lack of vaccines against HCV, there is an urgent need for an efficient treatment of the disease by an effective antiviral drug. Rational drug design has not been the primary way for discovering major therapeutics. Nevertheless, there are reports of success in the development of inhibitor using a structure-based approach. One of the possible targets for drug development against HCV is the NS3 protease variants. Based on the three-dimensional structure of these variants we expect to identify new NS3 protease inhibitors. In order to speed up the modeling process all NS3 protease variant models were generated in a Beowulf cluster. The potential of the structural bioinformatics for development of new antiviral drugs is discussed.Results: the atomic coordinates of crystallographic structure 1CU1 and 1DY9 were used as starting model for modeling of the NS3 protease variant structures. The NS3 protease variant structures are composed of six subdomains, which occur in sequence along the polypeptide chain. The protease domain exhibits the dual beta-barrel fold that is common among members of the chymotrypsin serine protease family. The helicase domain contains two structurally related beta-alpha-beta subdomains and a third subdomain of seven helices and three short beta strands. The latter domain is usually referred to as the helicase alpha-helical subdomain. The rmsd value of bond lengths and bond angles, the average G-factor and Verify 3D values are presented for NS3 protease variant structures.Conclusions: This project increases the certainty that homology modeling is an useful tool in structural biology and that it can be very valuable in annotating genome sequence information and contributing to structural and functional genomics from virus. The structural models will be used to guide future efforts in the structure-based drug design of a new generation of NS3 protease variants inhibitors. All models in the database are publicly accessible via our interactive website, providing us with large amount of structural models for use in protein-ligand docking analysis.

Consistent modified gravity: dark energy, acceleration and the absence of cosmic doomsday

We discuss modified gravity which includes negative and positive powers of curvature and provides gravitational dark energy. It is shown that in GR plus a term containing a negative power of curvature, cosmic speed-up may be achieved while the effective phantom phase (with w less than -1) follows when such a term contains a fractional positive power of curvature. Minimal coupling with matter makes the situation more interesting: even 1/R theory coupled with the usual ideal fluid may describe the (effective phantom) dark energy. The account of the R(2) term (consistent modified gravity) may help to escape cosmic doomsday.

Swimming versus swinging effects in spacetime

Wisdom has recently unveiled a new relativistic effect, called spacetime swimming, where quasirigid free bodies in curved spacetimes can speed up, slow down or deviate their falls by performing local cyclic shape deformations. We show here that for fast enough cycles this effect dominates over a nonrelativistic related one, named here space swinging, where the fall is altered through nonlocal cyclic deformations in Newtonian gravitational fields. We expect, therefore, to clarify the distinction between both effects leaving no room to controversy. Moreover, the leading contribution to the swimming effect predicted by Wisdom is enriched with a higher order term and the whole result is generalized to be applicable in cases where the tripod is in large redshift regions.

Lagrangian heuristic for a class of the generalized assignment problems

A Lagrangian based heuristic is proposed for many-to-many assignment problems taking into account capacity limits for task and agents. A modified Lagrangian bound studied earlier by the authors is presented and a greedy heuristic is then applied to get a feasible Lagrangian-based solution. The latter is also used to speed up the subgradient scheme to solve the modified Lagrangian dual problem. A numerical study is presented to demonstrate the efficiency of the proposed approach. (C) 2010 Elsevier Ltd. All rights reserved.

Ab Initio correlated all electron dirac-fock calculations for Eka-Francium Fluoride (E119F)

Fundação de Amparo à Pesquisa do Estado de São Paulo (FAPESP)

Generalized simulated annealing: Application to silicon clusters

We have compared the recently introduced generalized simulated annealing (GSA) with conventional simulated annealing (CSA). GSA was tested as a tool to obtain the ground-state geometry of molecules. We have used selected silicon clusters (Sin, n=4-7,10) as test cases. Total energies were calculated through tight-binding molecular dynamics. We have found that the replacement of Boltzmann statistics (CSA) by Tsallis's statistics (GSA) has the potential to speed up optimizations with no loss of accuracy. Next, we applied the GSA method to study the ground-state geometry of a 20-atom silicon cluster. We found an original geometry, apparently lower in energy than those previously described in the literature.

A compostagem como processo catalisador para a reutilização dos resídues de fábrica de celulose e papel

Recognizing the great potential of this residue to increase the eucalyptus forests produtivity - when used in its humidified form - the main objective of this project was to decompose the solid residues generated at Luiz Antonio mill, in a fast and artificial way, by means of piles or ridges of composted materials. The materials used in this composting process were: activated sludge, dregs and grits, wood ash and biomass. Applications of both phosphorus and potassium have been used during the planting phase. Nitrogen, in the form of urea, has been applied in two treatments with the main purpose to decrease the C/N ratio and to speed up the decomposition process. The experiment was carried out in 120 days. The best results were obtained in residue piles with a 3:1 ratio, i.e., 75% residues + 25% biomass. This mixture provided an extremely good aeration, thus enabling an appropriate material mixing and homogenization. Under the technological viewpoint, the results obtained from the composting process were quite satisfactory for VCP industrial residues treatment. This composting process enabled a material accelerated stabilization (lower C/N ratio) and homogenization. After this experiment, it became possible to use all residues just as they were generated by Luiz Antônio pulp and paper mill. This project is of the utmost relevance to VCP's forestry department as far as a significant amount of nutrients is getting back to the soil in the form of mineral and organic materials.

Mechanisms of action of fluoride for caries control

Fluoride was introduced into dentistry over 70 years ago, and it is now recognized as the main factor responsible for the dramatic decline in caries prevalence that has been observed worldwide. However, excessive fluoride intake during the period of tooth development can cause dental fluorosis. In order that the maximum benefits of fluoride for caries control can be achieved with the minimum risk of side effects, it is necessary to have a profound understanding of the mechanisms by which fluoride promotes caries control. In the 1980s, it was established that fluoride controls caries mainly through its topical effect. Fluoride present in low, sustained concentrations (sub-ppm range) in the oral fluids during an acidic challenge is able to absorb to the surface of the apatite crystals, inhibiting demineralization. When the pH is re-established, traces of fluoride in solution will make it highly supersaturated with respect to fluorhydroxyapatite, which will speed up the process of remineralization. The mineral formed under the nucleating action of the partially dissolved minerals will then preferentially include fluoride and exclude carbonate, rendering the enamel more resistant to future acidic challenges. Topical fluoride can also provide antimicrobial action. Fluoride concentrations as found in dental plaque have biological activity on critical virulence factors of S. mutans in vitro, such as acid production and glucan synthesis, but the in vivo implications of this are still not clear. Evidence also supports fluoride's systemic mechanism of caries inhibition in pit and fissure surfaces of permanent first molars when it is incorporated into these teeth pre-eruptively. © 2011 S. Karger AG, Basel.

New trends in musical genre classification using optimum-path forest

Musical genre classification has been paramount in the last years, mainly in large multimedia datasets, in which new songs and genres can be added at every moment by anyone. In this context, we have seen the growing of musical recommendation systems, which can improve the benefits for several applications, such as social networks and collective musical libraries. In this work, we have introduced a recent machine learning technique named Optimum-Path Forest (OPF) for musical genre classification, which has been demonstrated to be similar to the state-of-the-art pattern recognition techniques, but much faster for some applications. Experiments in two public datasets were conducted against Support Vector Machines and a Bayesian classifier to show the validity of our work. In addition, we have executed an experiment using very recent hybrid feature selection techniques based on OPF to speed up feature extraction process. © 2011 International Society for Music Information Retrieval.

Low-level laser therapy in pediatric bell's palsy: Case report in a three-year-old child

Objectives: The objective of this study was to apply low-level laser therapy (LLLT) to accelerate the recovery process of a child patient with Bell's palsy (BP). Design: This was a prospective study. Subject: The subject was a three-year-old boy with a sudden onset of facial asymmetry due to an unknown cause. Materials and methods: The low-level laser source used was a gallium aluminum arsenide semiconductor diode laser device (660 nm and 780 nm). No steroids or other medications were given to the child. The laser beam with a 0.04-cm2 spot area, and an aperture with approximately 1-mm diameter, was applied in a continuous emission mode in direct contact with the facial area. The duration of a laser session was between 15 and 30 minutes, depending on the chosen points and the area being treated. Light was applied 10 seconds per point on a maximum number of 80 points, when the entire affected (right) side of the face was irradiated, based on the small laser beam spot size. According to the acupuncture literature, this treatment could also be carried out using 10-20 Chinese acupuncture points, located unilaterally on the face. In this case study, more points were used because the entire affected side of the face (a large area) was irradiated instead of using acupuncture points. Outcome measures: The House-Brackmann grading system was used to monitor the evolution of facial nerve motor function. Photographs were taken after every session, always using the same camera and the same magnitude. The three-year-old boy recovered completely from BP after 11 sessions of LLLT. There were 4 sessions a week for the first 2 weeks, and the total treatment time was 3 weeks. Results: The result of this study was the improvement of facial movement and facial symmetry, with complete reestablishment to normality. Conclusions: LLLT may be an alternative to speed up facial normality in pediatric BP. © Copyright 2013, Mary Ann Liebert, Inc. 2013.