Expression, purification, and circular dichroism analysis of human CDK9

The human cyclin-dependent kinase 9 (CDK9) protein was expressed in E coli BL21 using the pET23a vector at 30 degrees C. Several milligrams of protein were purified from soluble fraction using ionic exchange and ATP-affinity chromatography. The structural quality of recombinant CDK9 and the estimation of its secondary structure were obtained by circular dichroism. Structural models of CDK9 presented 26% of helices in agreement with the spectra by circular dichroism analysis. This is the first report on human CDK9 expression in Escherichia coli and structure analysis and provides the first step for the development of CDK9 inhibitors. (c) 2006 Elsevier B.V. All rights reserved.

Superconducting boundary conditions for mesoscopic circular samples

Fundação de Amparo à Pesquisa do Estado de São Paulo (FAPESP)

Temperature-dependent vortex matter in a superconducting mesoscopic circular sector

Fundação de Amparo à Pesquisa do Estado de São Paulo (FAPESP)

Vortices in a mesoscopic superconducting circular sector

In the present paper we develop an algorithm to solve the time dependent Ginzburg-Landau equations, by using the link variables technique, for circular geometries. In addition, we evaluate the Helmholtz and Gibbs free energy, the magnetization, and the number of vortices. This algorithm is applied to a circular sector. We evaluate the superconduting-normal magnetic field transition, the magnetization, and the superconducting density. Our results point out that, as we reduce the superconducting area, the nucleation field increases. Nevertheless, as the angular width of the circular sector goes to small values the asymptotic behavior is independent of the sample area. We also show that the value of the first nucleation field is approximately the same independently of the form of the circular sector. Furthermore, we study the nucleation of giant and multivortex states for the different shapes of the present geometry.

Low-altitude, near-polar and near-circular orbits around Europa

Fundação de Amparo à Pesquisa do Estado de São Paulo (FAPESP)

Bovine pericardium retail preserved in glutaraldehyde and used as a vascular patch

Fundação de Amparo à Pesquisa do Estado de São Paulo (FAPESP)

Treatment of segmental tibial defects using acute bone shortening followed by gradual lengthening with circular external fixator

The aim of this study was to clinically and radiographically evaluate acute bone shortening followed by gradual lengthening in the treatment of large segmental tibia defects induced in seven clinically normal dogs. A circular external fixator was assembled with one proximal 5/8-circle ring, one middle ring and one distal ring connected with three rods. Thirty per cent of the tibia and fibula were removed in the middle and distal parts of the diaphyses, between the middle and distal rings. Acute bone shortening with compression of proximal and distal segments was performed. A subperiosteal osteotomy was performed between the half-ring and middle ring. Bone distraction started 7 days after surgery; after lengthening, the apparatus was left in place for 14 weeks for consolidation of regenerated bone. The frame was removed at the end of this period, and the dogs observed for four more weeks. Functional results were considered excellent in two, good in three and fair in the other two dogs. Bone regeneration within the distraction gap was obtained 14 weeks after neutral fixation period. We concluded that acute bone shortening followed by gradual lengthening by Ilizarov method can be used to treat extensive tibial defects in dogs, although it presents limb temporary abnormal limb shape and unequal length as early disadvantages.

Stochastic dynamics in exotic and native blowflies: an analysis combining laboratory experiments and a two-patch metapopulation model

In this study we explored the stochastic population dynamics of three exotic blowfly species, Chrysomya albiceps, Chrysomya megacephala and Chrysomya putoria, and two native species, Cochliomyia macellaria and Lucilia eximia, by combining a density-dependent growth model with a two-patch metapopulation model. Stochastic fecundity, survival and migration were investigated by permitting random variations between predetermined demographic boundary values based on experimental data. Lucilia eximia and Chrysomya albiceps were the species most susceptible to the risk of local extinction. Cochliomyia macellaria, C. megacephala and C. putoria exhibited lower risks of extinction when compared to the other species. The simultaneous analysis of stochastic fecundity and survival revealed an increase in the extinction risk for all species. When stochastic fecundity, survival and migration were simulated together, the coupled populations were synchronized in the five species. These results are discussed, emphasizing biological invasion and interspecific interaction dynamics.

Semiclassical approach to the decay of protons in circular motion under the influence of gravitational fields

We investigate the possible decay of protons in geodesic circular motion around neutral compact objects. Weak and strong decay rates and the associated emitted powers are calculated using a semiclassical approach. Our results are discussed with respect to distinct ones in the literature, which consider the decay of accelerated protons in electromagnetic fields. A number of consistency checks are presented along the paper.

Patch-size and isolation effects in the Fisher-Kolmogorov equation

We examine the classical problem of the existence of a threshold size for a patch to allow for survival of a given population in the case where the patch is not completely isolated. The surrounding habitat matrix is characterized by a non-zero carrying capacity. We show that a critical patch size cannot be strictly defined in this case. We also obtain the saturation density in such a patch as a function of the size of the patch and the relative carrying capacity of the outer region. We argue that this relative carrying capacity is a measure of the isolation of the patch. Our results are then compared with conclusions drawn from observations of the population dynamics of understorey birds in fragments of the Amazonian forest and shown to qualitatively agree with them, offering an explanation for the importance of dispersal and isolation in these observations. Finally, we show that a generalized critical patch size can be introduced resorting to threshold densities for the observation of a given species.

Quality of mechanized coffee harvesting in circular planting system

A colheita mecanizada de café se destaca como um dos principais avanços tecnológicos em benefício dos produtores, porém, problemas com planejamento no plantio e desenvolvimento da cultura, bem como falhas na regulagem da colhedora, podem acarretar em redução na eficiência da operação, tornando-a mais estressante para a cultura que a colheita manual. Diante disso, o presente trabalho foi realizado no município de Patos de Minas, MG, com o objetivo de avaliar os danos na parte vegetativa e a qualidade da colheita mecanizada do café cultivado em plantio circular sob pivô central, com duas frequências de vibração das hastes, sob o controle estatístico do processo. Observou-se que a bienalidade negativa sobre a cultura reduziram a carga inicial de café, eliminando o efeito das condições de insolação. Os índices de qualidade da colheita apresentaram distribuição assimétrica, com grande variabilidade nas amostras, sendo apenas a eficiência de derriça influenciada pelos eixos avaliados, e se mostrando estável pelo controle estatístico. Os danos causados às plantas pela colheita apresentaram valores desejáveis, não variando em função dos fatores analisados, mas sendo considerado sob controle estatístico.

Forced convection to laminar flow of liquid egg yolk in circular and annular ducts

Fundação de Amparo à Pesquisa do Estado de São Paulo (FAPESP)

Debris perturbed by radiation pressure: relative velocities across circular orbits

In the present work we consider a dynamical system of mum size particles around the Earth subject to the effects of radiation pressure. Our main goal is to study the evolution of its relative velocity with respect to the co-planar circular orbits that it crosses. The particles were initially in a circular geostationary orbit, and the particles size were in the range between 1 and 100 mum. The radiation pressure produces variations in its eccentricity, resulting in a change in its orbital velocity. The results indicated the maximum linear momentum and kinetic energy increases as the particle size increases. For a particle of 1 mum the kinetic energy is approximately 1.56 x 10(-7) J and the momentum is 6.27 x 10(-11) kg m/s and for 100 mum the energy is approximately 1.82 x 10(-4) J and the momentum is 2.14 x 10(-6) kg m/s. (C) 2004 COSPAR. Published by Elsevier Ltd. All rights reserved.