Protein-Ion Binding Process on Finite Macromolecular Concentration. A Poisson-Boltzmann and Monte Carlo Study

Conselho Nacional de Desenvolvimento Científico e Tecnológico (CNPq)

pK determination. A mean field, Poisson-Boltzmann approach

A model describing dissociation of monoprotonic acid and a method for the determination of its pK value are presented. The model is based on a mean field approximation. The Poisson-Boltzmann equation, adopting spherical symmetry, is numerically solved, and the solution of its linearized form is written. By use of the pH values of a dilution experiment of galacturonic acid as the entry data, the proposed method allowed estimation of the value of pK = 3.25 at a temperature of 25 degrees C. Values for the complex dimensions and dissociation degree are calculated using experimental pH values for solution concentration values ranging from 0.1 to 60 mM. The present analysis leads to the conclusion that the Poisson-Boltzmann equation or its linear form is equally suited for the description of such systems.

Podolsky electromagnetism at finite temperature: Implications on the Stefan-Boltzmann law

Conselho Nacional de Desenvolvimento Científico e Tecnológico (CNPq)

Solution of the Poisson-Boltzmann equation for a system with four ionic species

The analytical solution of the Poisson-Boltzmann equation in an electrolyte with four ionic species (2:2:1:1), in the presence of a charged planar membrane or surface is presented. The function describing the mean electrical potential provides a convenient description that helps the understanding of electrical processes of biological interest.

INTEGRATION OF THE NONLINEAR POISSON BOLTZMANN-EQUATION FOR CHARGED VESICLES IN ELECTROLYTIC SOLUTIONS

The Poisson-Boltzmann equation (PBE), with specific ion-surface interactions and a cell model, was used to calculate the electrostatic properties of aqueous solutions containing vesicles of ionic amphiphiles. Vesicles are assumed to be water- and ion-permeable hollow spheres and specific ion adsorption at the surfaces was calculated using a Volmer isotherm. We solved the PBE numerically for a range of amphiphile and salt concentrations (up to 0.1 M) and calculated co-ion and counterion distributions in the inside and outside of vesicles as well as the fields and electrical potentials. The calculations yield results that are consistent with measured values for vesicles of synthetic amphiphiles.

pH at the micellar interface: Synthesis of pH probes derived from salicylic acid, acid-base dissociation in sodium dodecyl sulfate micelles, and Poisson-Boltzmann simulation

The study of the H+ concentration at the micellar interface is a convenient system for modeling the distribution of H+ at interfaces. We have synthesized salicylic acid derivatives to analyze the proton dissociation of both the carboxylic and phenol groups of' the probes, determining spectrophotometrically the apparent pK(a)'s (pK(ap)) in sodium dodecyl Sulfate, SDS, micelles with and without added salt. The synthesized probes were 2-hydroxy-5-(2-trimethylammoniumacetyl)benzoate; 2-hydroxy-5-(2-dimethylhexadecylammoniumacetyl)benzoate- 2-hydroxy-5-(2-dimethylhexadecylammoniumhexanoyl)benzoate-, 2-hydroxy-5-(2-diniethylhexadecylammoniumundecanoyl)betizoate; 2-hydroxy-5-acetylbenzoic acids and 2-hydroxy-5-dodecanoylbenzoic acid. Upon incorporation into SDS micelles the pK(ap)'s of both carboxylic and phenol groups increased by ca. 3 pH units and NaCl addition caused a decrease in the probe-incorporated pKap. The experimental results were fitted with a cell model Poisson-Boltzmann (P-B) equation taking in consideration the effect of salt on the aggregation number of SDS and using the distance of' the dissociating group as a parameter. The conformations of the probes were analyzed theoretically using two dielectric constants, e.g., 2 and 78. Both the P-B analysis and conformation calculations can be interpreted by assuming that the acid groups dissociate very close to, or at, the interface. Our results are consistent with the assumption that the intrinsic pK(a)'s of both carboxylic and phenol groups of the salicylic acid probes used here can be taken as those in water. Using this assumption the micellar and salt effects on the pKap's of the (trialkylammonium)benzoate probes were described accurately using a cell model P-B analysis. (c) 2005 Elsevier B.V. All rights reserved.

Aplicação da equação de Paisson-Boltzmann com condição de contorno para regulação carga-potencial a sistemas polieletrolíticos

Coordenação de Aperfeiçoamento de Pessoal de Nível Superior (CAPES)

Model selection for discriminative restricted boltzmann machines through meta-heuristic techniques

Conselho Nacional de Desenvolvimento Científico e Tecnológico (CNPq)

Período de interferência de plantas daninhas em mandioca (Manihot esculenta) no noroeste do Paraná

A mandioca é uma exploração agrícola importante no Estado do Paraná. No entanto, há limitadas informações relacionadas à interferência das plantas daninhas nessa cultura. Objetivou-se com este trabalho estimar o período crítico de prevenção à interferência (PCPI) na cultura da mandioca (variedade Fécula Branca), nas condições edafoclimáticas do noroeste do Paraná. O experimento foi dividido em dois grupos de tratamentos: com períodos crescentes na presença de plantas daninhas (PAI); e com períodos crescentes na ausência de plantas daninhas (PTPI). Foram identificadas as espécies de plantas daninhas e densidades de infestação na área e calculada a importância relativa (IR), avaliando-se também o estande da cultura e a produtividade de raízes comerciais. As principais plantas daninhas presentes na área e que apresentaram os maiores valores de IR foram Cenchrus echinatus e Brachiaria decumbens. Aceitando-se uma tolerância de redução de produtividade de 5%, o PAI ajustado foi de 18 dias após o plantio da cultura, e o PTPI, de 100 dias. Concluiu-se que o PCPI da cultura para as condições edafoclimáticas do noroeste do Paraná situa-se entre 18 e 100 dias após o plantio.

Interfacial concentrations of chloride and bromide in zwitterionic micelles with opposite dipoles: Experimental determination by chemical trapping and a theoretical description

Fundação de Amparo à Pesquisa do Estado de São Paulo (FAPESP)

DM particles: how warm they can be?

Coordenação de Aperfeiçoamento de Pessoal de Nível Superior (CAPES)

Dissipative hydrodynamics coupled to chiral fields

Conselho Nacional de Desenvolvimento Científico e Tecnológico (CNPq)

Three-parameter soil-water transient equations in horizontal water-transport analysis

For data obtained from horizontal soil column experiments, the determination of soil-water transport characteristics and functions would be aided by a single-form equation capable of objectively describing water content theta vs. time t at given position x(f). Our study was conducted to evaluate two such possible equations, one having the form of the Weibull frequency distribution, and the other being called a bipower form. Each equation contained three parameters, and was fitted by nonlinear least squares to the experimental data from three separate columns of a single soil. Across the theta range containing the measured data points obtained by gamma-ray attenuation, the two equations were in close agreement. The resulting family of theta(x(f),t) transients, as obtained from either equation, enabled the evaluation of exponent n in the t(n) dependence of the positional advance of a given theta. Not only was n found to be <0.5 at low theta values, but it also increased with theta and tended toward 0.5 as theta approached its sated (near-saturated) value. Some quantitative uncertainty in n(theta) does arise due to the reduced number of data points available at the higher water contents. Without claiming non-Boltzmann behavior (n < 0.5) as necessarily representative of all soils, we nonetheless consider n(theta) to be worthy of further study for evaluating its significance and implications.

ZERO SOUND-VELOCITY IN PI, RHO-MESON GASES

Sharp transitions are perhaps absent in QCD, so that one looks for physical quantities which may reflect the phase change. One such quantity is the sound velocity which was shown in lattice theory to become zero at the transition point for pure glue. We show that even in a simple bag model the sound velocity goes to zero at temperature T = T(v) not-equal 0 and that the numerical value of this T(v) depends on the nature of the meson. The average thermal energy of mesons goes linearly with T near T(v), with much smaller slope for the pion. The T(v) - s can be connected with the Boltzmann temperatures obtained from transverse momentum spectrum of these mesons in heavy-ion collision at mid-rapidity. It would be interesting to check the presence of different T(v) - s in present day finite T lattice theory.