Modeling Habitat Split: Landscape and Life History Traits Determine Amphibian Extinction Thresholds

Habitat split is a major force behind the worldwide decline of amphibian populations, causing community change in richness and species composition. In fragmented landscapes, natural remnants, the terrestrial habitat of the adults, are frequently separated from streams, the aquatic habitat of the larvae. An important question is how this landscape configuration affects population levels and if it can drive species to extinction locally. Here, we put forward the first theoretical model on habitat split which is particularly concerned on how split distance - the distance between the two required habitats - affects population size and persistence in isolated fragments. Our diffusive model shows that habitat split alone is able to generate extinction thresholds. Fragments occurring between the aquatic habitat and a given critical split distance are expected to hold viable populations, while fragments located farther away are expected to be unoccupied. Species with higher reproductive success and higher diffusion rate of post-metamorphic youngs are expected to have farther critical split distances. Furthermore, the model indicates that negative effects of habitat split are poorly compensated by positive effects of fragment size. The habitat split model improves our understanding about spatially structured populations and has relevant implications for landscape design for conservation. It puts on a firm theoretical basis the relation between habitat split and the decline of amphibian populations. © 2013 Fonseca et al.

Interaction between breeding habitat and elevation affects prevalence but not infection intensity of Batrachochytrium dendrobatidis in Brazilian anuran assemblages

Conselho Nacional de Desenvolvimento Científico e Tecnológico (CNPq)

Anuran captured in pitfall traps in three agrossystem in Northwestern São Paulo State, Brazil

Embora seja geralmente assumido que a agricultura influencia negativamente populações de anfíbios, existem poucos estudos sobre os efeitos dos cultivos agrícolas em anuros neotropicais. Visando contribuir para diminuir essa lacuna de conhecimento, no presente estudo buscamos verificar quais espécies de anuros estão presentes nos agrossistemas. Para isso, usamos dados de anuros capturados em armadilhas de queda, inicialmente proposto para o levantamento da fauna de opiliões em três agrossistemas (milho, soja e seringal). Nós registramos quatro espécies de anuros nas armadilhas de queda: Leptodactulus fuscus, L. mystacinus (Leptodactylidae), Eupemphix nattereri e Physalaemus cuvieri (Leiuperidae). Na plantação de milho foram registradas quatro espécies e 30 indivíduos, no seringal quatro espécies e 11 indivíduos e na plantação de soja três espécies e oito indivíduos. Nossos resultados mostram que os anuros estão presentes nos agrossistemas, principalmente espécies de anuros generalistas.

The Archipelago of Fernando de Noronha: An Intriguing Malformed Toad Hotspot in South America

Fundação de Amparo à Pesquisa do Estado de São Paulo (FAPESP)

Avaliação da organização da variabilidade genética em populações de anfíbios de hábitats antropizados por meio marcadores microssatélites

Conselho Nacional de Desenvolvimento Científico e Tecnológico (CNPq)

Aspectos ecológicos da helintofauna de anfíbios Leptodactylidae (ANURA) no Estado do Mato Grosso, Brasil

Pós-graduação em Ciências Biológicas (Zoologia) - IBB

Relações entre variáveis ambientais e anfíbios anuros em áreas de cerrado e floresta estacional semidecidual

Coordenação de Aperfeiçoamento de Pessoal de Nível Superior (CAPES)

Helmintofauna de duas espécies de anfíbios, Haddadus binotatus (Anura: Craugastoridae) e Ischnocnema guentheri (Anura: Brachycephalidae), da Mata Atlântica, no município de São Luiz do Paraitinga, São Paulo, Brasil

The Brazilian Atlantic Forest harbors a rich biodiversity with more than four hundred of amphibian species and many of these are endemic in this environment. This high rate of restricted endemism associated with global decline of amphibian diversity and density make it an important priority for the conservation of this ecosystem and to warrant intensive monitoring amphibian populations. Considering the importance that the parasites have on the ecology of their hosts, parasitic infections become a considerable factor in conservation biology. To expand the knowledge of this area, 23 specimens of Haddadus binotatus (Anura: Craugastoridae) and 36 Ischnocnema guentheri (Anura: Brachycephalidae) were collected from Santa Virginia, São Luiz do Paraitinga, São Paulo, between January and February 2010, to study their helminth parasites. Twelve helminth taxa were diagnosed and six of them were common to both hosts. The higher prevalence (P = 96%), mean abundance (MA = 11.7 ± 1.6) and mean intensity of infection (MII = 12.3 ± 1.6) were presented by H. binotatus compared to I. guentheri (P = 67%, MA = 2.4 ± 0.5, MII = 3.6 ± 0.6). Nematode species were found in different stages (cysts, larvae and adults) and acanthocephalans were found in both anurans. However, cestode species was found only in I. guentheri. Differences in parasitism of two species of frogs have been attributed to different sizes and micro-habitats of animals that allow different diets and contact with different helminth species. All helminths found have not been reported H. binotatus and also three new species records were noticed for I. guentheri

Efeitos da desconexão de habitat na diversidade funcional de anfíbios anuros (Amphibia: Anura) na Mata Atlântica

Amphibian populations worldwide have been suffering declines generated by habitat degradation, loss, fragmentation and habitat split. With habitat loss and fragmentation in the landscape comes habitat split, which is the separation between the adult anuran habitat and breeding sites, forcing individuals to move through matrix during breeding seasons. Thus, habitat split increases the chance of extinction of amphibians with aquatic larval development and acts as a filter in the selection of species having great influence on species richness and community structure. The use of functional diversity allows us to consider the identity and characteristics of each species to understand the effects of fragmentation processes. The objective of this study was to estimate the effects of habitat split, as well as habitat loss in the landscape, on amphibians functional diversity (FD) and species richness (S). We selected 26 landscapes from a database with anuran surveys of Brazilian Atlantic Forest. For each landscape we calculated DF, S and landscape metrics at multiple scales. To calculate the DF we considered traits that influenced species use and persistence in the landscape. We refined maps of forest remnants and water bodies for metrics calculation. To relate DF and S (response variables) to landscape variables (explanatory variables), we used a model selection approach, fitting generalized linear models (GLMS) and making your selection with AICc. We compared the effect of model absence and models with habitat split, habitat amount and habitat connectivity effects, as well as their interaction. The most plausible models for S were the sum and interaction between habitat split in 7.5 km scale. For anurans with terrestrial development, habitat amount was the only plausible explanatory variable, in the 5 km scale. For anurans with aquatic larvae habitat amount in larger scales and the addition of habitat amount and habitat split were plausible...

Helminth parasite communities of allopatric populations of the frog Leptodactylus podicipinus from Pantanal, Brazil

Conselho Nacional de Desenvolvimento Científico e Tecnológico (CNPq)

Partitioning the net effect of host diversity on an emerging amphibian pathogen

Coordenação de Aperfeiçoamento de Pessoal de Nível Superior (CAPES)

Linking genetic and environmental factors in amphibian disease risk

A central question in evolutionary biology is how interactions between organisms and the environment shape genetic differentiation. The pathogen Batrachochytrium dendrobatidis (Bd) has caused variable population declines in the lowland leopard frog (Lithobates yavapaiensis); thus, disease has potentially shaped, or been shaped by, host genetic diversity. Environmental factors can also influence both amphibian immunity and Bd virulence, confounding our ability to assess the genetic effects on disease dynamics. Here, we used genetics, pathogen dynamics, and environmental data to characterize L.yavapaiensis populations, estimate migration, and determine relative contributions of genetic and environmental factors in predicting Bd dynamics. We found that the two uninfected populations belonged to a single genetic deme, whereas each infected population was genetically unique. We detected an outlier locus that deviated from neutral expectations and was significantly correlated with mortality within populations. Across populations, only environmental variables predicted infection intensity, whereas environment and genetics predicted infection prevalence, and genetic diversity alone predicted mortality. At one locality with geothermally elevated water temperatures, migration estimates revealed source-sink dynamics that have likely prevented local adaptation. We conclude that integrating genetic and environmental variation among populations provides a better understanding of Bd spatial epidemiology, generating more effective conservation management strategies for mitigating amphibian declines.

Source populations in coastal crabs: parameters affecting egg production

Fundação de Amparo à Pesquisa do Estado de São Paulo (FAPESP)

Water quality and plankton populations in an earthen polyculture pond

Fundação de Amparo à Pesquisa do Estado de São Paulo (FAPESP)

Genetic differentiation between sympatric populations of Bacillus cereus and Bacillus thuringiensis

Little is known about genetic exchanges in natural populations of bacteria of the spore-forming Bacillus cereus group, because no population genetics studies have been performed with local sympatric populations. We isolated strains of Bacillus thuringiensis and B. cereus from small samples of soil collected at the same time from two separate geographical sites, one within the forest and the other at the edge of the forest. A total of 100 B. cercus and 98 B. thuringiensis strains were isolated and characterized by electrophoresis to determine allelic composition at nine enzymatic loci. We observed genetic differentiation between populations of B. cereus and B. thuringiensis. Populations of a given Bacillus species-B. thuringiensis or B. cereus-were genetically more similar to each other than to populations of the other Bacillus species. Hemolytic activity provided further evidence of this genetic divergence, which remained evident even if putative clones were removed from the data set. Our results suggest that the rate of gene flow was higher between strains of the same species, but that exchanges between B. cereus and B. thuringiensis were nonetheless possible. Linkage disequilibrium analysis revealed sufficient recombination for B. cereus populations to be considered panmictic units. In B. thuringiensis, the balance between clonal proliferation and recombination seemed to depend on location. Overall, our data indicate that it is not important for risk assessment purposes to determine whether B. cereus and B. thuringiensis belong to a single or two species. Assessment of the biosafety of pest control based on B. thuringiensis requires evaluation of the extent of genetic exchange between strains in realistic natural conditions.