Genetic structure of the ornamental tetra fish species Piabucus melanostomus Holmberg, 1891 (CHARACIDAE, IGUANODECTINAE) in the Brazilian Pantanal wetlands inferred by mitochondrial DNA sequences

Fundação de Amparo à Pesquisa do Estado de São Paulo (FAPESP)

Contemporary gene flow and weak genetic structuring in Rococo toad (Rhinella schneideri) populations in habitats fragmented by agricultural activities

Fundação de Amparo à Pesquisa do Estado de São Paulo (FAPESP)

Tendency towards homogenization in fish assemblages in the cascade reservoir system of the Tiete river basin, Brazil

Fundação de Amparo à Pesquisa do Estado de São Paulo (FAPESP)

The invertebrate colonization during decomposition of Eichhornia azurea kunth in a lateral lake in the mouth zone of Paranapanema River into Jurumirim Reservoir (São Paulo, Brazil)

Fundação de Amparo à Pesquisa do Estado de São Paulo (FAPESP)

Genetic structure of Blastocerus dichotomus populations in the Parana River basin (Brazil) based on protein variability

The population structure of 147 marsh deer (Blastocerus dichotomus) from three areas in the Parana River basin, Brazil, was studied by observing protein polymorphism at 17 loci. Six loci were polymorphic and 11 monomorphic. The proportion of polymorphic loci (P) was 35.29% and the average heterozygosity (H) was 6.31%. Wright's F-ST indicated that only 4.9% of the total variation in allelic frequencies was due to genetic differences between the three groups. The high value of F-IS (0.246) indicated inbreeding in the marsh deer. Genetic distance values (D = 0.014-0.051) showed little divergence between the three areas. We suggest that probable mechanisms accounting for the genetic structure are female phylopatry and polygyny and also that inbreeding has resulted from decreasing areas of wetland leading to isolation, overhunting, and diseases transmitted by cattle.

Fish stock assessment of piraputanga Brycon microlepis in the Cuiabá River Basin, Pantanal of Mato Grosso, Brazil

Fork length measurements of individuals of Brycon microlepis landed and commercialized at the Porto Market in Cuiabá, MT, from May-October 1996 to May-October 1997 were used to estimate growth and mortality parameters for this species. The average estimated populational parameters were: L∞_ = 705 mm, k = 0.275 year -1, C = 0.775, WP = 0.465, Lc = 164 mm, M = 0.585 year -1, Z = 0.822 year -1, with F = 0.237 year -1. Yield per recruit analysis suggests that the stock is not yet overexploited.

The fish fauna in tropical rivers: The case of the Sorocaba river basin, São Paulo, Brazil

A survey was carried out on the fish species in the Sorocaba River basin, the main tributary of the left margin of the Tietê River, located in the State of São Paulo, Brazil. The species were collected with gill nets. After identification of the specimens, their relative abundance, weight and standard length were determined. Up to the present moment there are not any studies that focus this subject in this hydrographic basin. Fifty-three species, distributed in eighteen families and six orders were collected. Characiformes were represented by twenty-eight species, Siluriformes by seventeen species, the Gymnotiformes by three species, Perciformes and Cyprinodontiformes by two species, and the Synbranchiformes by one species. Among the collected species there were two exotic. The most abundant species were Astyanax fasciatus and Hypostomus ancistroides. In relation to total weight the most representative species were Hoplias malabaricus and Hypostomus ancistroides. Cyprinus carpio, Prochilodus lineatus, Schizodon nasutus and Hoplias malabaricus were the most representative species in relation to average weight. Largest standard length were recorded for Sternopygus macrurus, Steindachnerina insculpta, Eigenmannia off. virescens and Cyprinus carpio.

Genetic diversity in wild (Sus scrofa scrofa) and domestic (Sus scrofa domestica) pigs and their hybrids based on polymorphism of a fragment of the D-loop region in the mitochondrial DNA

We examined the variation in mitochondrial DNA by sequencing the D-loop region in wild and domestic (large-white breed) pigs, in hybrids between domestic and wild pigs, and in Monteiro pigs. A D-loop fragment of approximately 330 bp was amplified by PCR. Sequencing of DNA amplicons identified haplotypes previously described as European and Asian types. Monteiro pigs and wild pigs had European haplotypes and domestic pigs had both European and Asian haplotypes. ©FUNPEC-RP.

Disentangling the influences of habitat structure and limnological predictors on stream fish communities of a coastal basin, southeastern Brazil

Em ambientes de riacho, fatores relacionados à estrutura dos habitats e limnologia interagem regulando os padrões de transferência de energia e matéria, afetando a composição da comunidade de peixes. Em bacias costeiras do sudeste do Brasil as características limnológicas e estrutura dos habitats diferem entre riachos de águas claras e pretas. Os primeiros são compostos por uma variedade de tipos de substrato, possuem velocidades de corrente mais elevadas e baixa condutividade, enquanto os últimos apresentam substrato arenoso, baixas velocidades de corrente e águas escuras e ácidas. Neste trabalho analisamos a importância relativa da estrutura dos habitats e das variáveis limnológicas como preditores dos padrões de composição em comunidades de peixes de riachos. Oito riachos de primeira a terceira ordem foram amostrados na planície costeira da bacia do rio Itanhaém. Capturamos 34 espécies e verificamos que a composição das comunidades foi influenciada por fatores estruturais e limnológicos, sendo os primeiros mais importantes. Uma fração de variação que não pode ser totalmente decomposta, deve-se à influência conjunta da limnologia e estrutura dos habitats. Algumas das espécies restritas aos riachos de águas pretas provavelmente apresentam adaptações fisiológicas e comportamentais para lidar com os baixos níveis de pH. Quando foram examinados somente os riachos de águas claras, toda a variação explicada na composição da comunidade de peixes foi atribuída aos fatores estruturais, devido a preferências específicas por diferentes características de hábitats.

The fish fauna in tropical rivers: The case of the Sorocaba river basin, Sao Paulo, Brazil

A survey was carried out on the fish species in the Sorocaba. River basin, the main tributary of the left margin of the Tiete River, located in the State of Sao Paulo, Brazil. The species were collected with gill nets. After identification of the specimens, their relative abundance, weight and standard length were determined. Up to the present moment there are not any studies that focus this subject in this hydrographic basin. Fifty-three species, distributed in eighteen families and six orders were collected. Characiformes were represented by twenty-eight species, Siluriformes by seventeen species, the Gymnotiformes by three species, Perciformes and Cyprinodontiformes by two species, and the Synbranchiformes by one species. Among the collected species there were two exotic. The most abundant species were Astyanax fasciatus and Hypostomus ancistroides. In relation to total weight the most representative species were Hoplias malabaricus and Hypostomus ancistroides. Cyprinus carpio, Prochilodus lineatus, Schizodon nasutus and Hoplias malabaricus were the most representative species in relation to average weight. Largest standard length were recorded for Sternopygus macrurus, Steindachnerina insculpta, Eigenmannia aff. virescens and Cyprinus carpio.

Genetic analysis of superoxide dismutase 1 gene in murrah river buffalo

Fundação de Amparo à Pesquisa do Estado de São Paulo (FAPESP)

Phylogeography of Hypostomus strigaticeps (Siluriformes: Loricariidae) inferred by mitochondrial DNA reveals its distribution in the upper Paraná River basin

Conselho Nacional de Desenvolvimento Científico e Tecnológico (CNPq)

Caracterização da estrutura genética populacional do tubarão-crocodilo (Pseudocarcharias kamoharai) no Atlântico equatorial utilizando marcadores moleculares

Coordenação de Aperfeiçoamento de Pessoal de Nível Superior (CAPES)

Population genetic structure revealed by a school of the freshwater migratory fish, Brycon hilarii

Coordenação de Aperfeiçoamento de Pessoal de Nível Superior (CAPES)

RAPD analysis in the Neotropical fish Brycon lundii: Genetic diversity and its implications for the conservation of the species

Random amplified polymorphic DNA (RAPD) technique was used to examine the genetic variability on an endangered Neotropical fish species, Brycon lundii, collected on two regions with distinct environmental conditions in the São Francisco River (Brazil), downstream from a hydroelectric station. Using decamer oligonucleotides as single primers in Polymerase Chain Reaction (PCR), genetic similarity index, mean allele frequency and mean heterozigosity were estimated, revealing variations between samples from the two regions. Moreover, a fragment of about 1200 base pairs was found in 100% of the examined animals collected at the region closer to the hydroelectric dam, while its frequency was much lower (27.3%) within the sample from the second collecting site, 30 km downstream from the dam, indicating a possible correlation between genetic variation and geographical area. A dendogram representing the relationships among genotypes was obtained, demonstrating at least two major clusters of animals. Based on the data, a model of population structuring in Brycon lundii is suggested. The described approach holds great promise for further analyses and gives support to biodiversity maintenance and recovery efforts of B. lundii.