Plant or fungal sequences? An alternative optimized PCR protocol to avoid ITS (nrDNA) misamplification

Fundação de Amparo à Pesquisa do Estado de São Paulo (FAPESP)

On the number of singularities in generic deformations of map germs

Let f:C-n, 0 --> C-p, 0 be a K-finite map germ, and let i = (i(1),..., i(k)) be a Boardman symbol such that Sigma(i) has codimension n in the corresponding jet space J(k)(n, p). When its iterated successors have codimension larger than n, the paper gives a list of situations in which the number of Sigma(i) points that appear in a generic deformation of f can be computed algebraically by means of Jacobian ideals of f. This list can be summarised in the following way: f must have rank n - i(1) and, in addition, in the case p = 6, f must be a singularity of type Sigma(i2.i2).

Diversidade e riqueza de formigas (Hymenoptera: Formicidae) em remanescentes de Mata Atlantica na Bacia Hidrografica do Alto Tiete, SP

O objetivo deste estudo foi descrever a diversidade, composição e a similaridade da fauna de formigas entre sete remanescentes de Floresta Ombrófila Densa da Bacia Hidrográfica do Alto Tietê. Dois desses remanescentes pertencem à Unidades de Conservação, quatro estão sob proteção e um fragmento pertence à propriedade particular. Em cada área foram coletadas 50 m2 de serapilheira, que foram submetidas à extratores do tipo mini-Winkler, onde permaneceram por 48 h. Todas as coletas ocorreram no período chuvoso. No total foram registradas 11 subfamílias, 44 gêneros e 158 morfoespécies/espécies de formigas. As espécies mais frequentes em todas as áreas foram Pheidole sp.7, Solenopsis sp.1, Hypoponera sp.1 e Strumigenys denticulate. O maior valor de diversidade α foi registrado na unidade de conservação com composição florística de Mata Atlântica; o menor valor em florestas com influência antrópica. A variação na composição de espécies entre as áreas indica a substituição de espécies entre os remanescentes de Floresta Ombrófila Densa da Bacia Hidrográfica do Alto Tietê, o que sugere a importância da preservação dessas áreas para a conservação da diversidade regional da fauna de formigas.

Mortalidade Materna: uma abordagem atualizada

Purpose: to review literature, highlighting current aspects of maternal mortality.  Method: research initiated through electronic data base PubMed [http:// www.ncbi.nlm.nih.gov/pubmed], limited to the last 10 years. The selected cases which related to pre-defined aspects of interest to the study, such as vulnerable population, risk factors, causes, difficulties in obtaining data, preventive measures e new approaches to the problem, among them, ‘near misses’ and severe maternal morbidity.  Results: maternal death is directly related to the quality of life of the population, with relevant disparities among the different social economic areas. Although maternal mortality is the proper indicator to the female population health, its numbers are presented in unrealistic manners due to the difficulties in identifying the cases through death certificates. Preventive measures associated to early and adequate diagnose and treatment are benefic factors in decreasing those maternal deaths. Apart from these, identification and classification of ‘near misses’ and maternal morbidity are featured in the contemporary approach to the issue.  Final considerations: In spite of advanced technology and recognition of preventive measures, a large number of women die daily due to complications in the pregnancy and puerperal cycle. To decrease such tragedy political, social and economical commitment to Health is necessary, in order to promote the needed reforms in the assistance of such cycle.

Projected length annealing of etched Sm-152 ion tracks in apatite

Conselho Nacional de Desenvolvimento Científico e Tecnológico (CNPq)

Birds of a eucalyptus woodlot in interior São Paulo.

Some 255 birds were recorded between 1982-2001 in and near a 2314-ha Horto of old eucalyptus plantations with native understory and a lake, near Rio Claro, in central São Paulo, Brazil. This is close to the 263 recorded in and around a ten-times smaller nearby 230-ha woodlot of semideciduous forest. Different species were 44, for a total of 307 in both areas. One hundred and fifty nonvagrant forest and border species were recorded in 1982-86, a number close to the 152 in the small native woodlot. With dry years and logging of plots in 1985-93, 21 of the 150 species were lost, 42 species decreased in numbers, 49 were stable, 19 increased (15 being border species), and 5 entered (one of dry forest and 4 of borders), so 129 species remained in 1996-2001 compared to 133 in the native woodlot. Open-area birds were 33, versus 50 in better-checked grassy swales in sugar cane near the natural woodlot, for a total of 53. Several species, like some border ones, did not enter the open but isolated and mowed interior lake area, or took years to do so. Water and marsh birds were 46 versus 40 in smaller creeks and ponds near the natural woodlot (total, 55) but many were migrants or infrequent visitors using distant areas, and perhaps should be counted as 0.1-0.9 local species rather than 1 species. Use of this more accurate method would reduce waterbird totals by 14 species in the Horto and by 11 around the native woodlot. I also recommend longer censusing at the edges in large woodlots or many edge species will be recorded only in small fragments of habitat. Several species increased and others decreased with occasional cat-tail and water-lily cleanups at the lake. A forested corridor between the Horto and natural woodlot is recommended, with old eucalyptus left to provide flowers for hummingbirds.

O papel das argininas alfa-92 e alfa-141 na regulação das propriedades funcionais de hemoglobinas por íons cloreto

The oxygenation of human Hb (HbA) demands a three state model: two deoxy states To and Tx, free and complexed with anions respectively, and an oxy R state. The regulation between these states is modulated by the presence of anions, such as chloride, that binds to T state. The b inding if chloride, however, remains controversial. The aim of this work is the study of arginines 92a (a1ß2 interface) and 141a (C-terminal) as chloride binding sites. To investigate that, we have studied 92 and 141 site directed mutant species: natural mutants Hb J-Cape-Town (R92Q), desArg (R141Δ), Chesapeake (R92L), and the constructed Chesapeake desArg (R92L,141Δ). We expressed Hbs in Escherichia coli and purified. Through oxygen binding curves we measured affinity and cooperativity, in function of water effect and Bohr effect in presence and absence of chloride. Structural features were obtained through 1H NMR spectroscopy Oxygen binding properties and Bohr effect measured indicated a higher affinity and lower cooperativity in absence and presence of chloride for all mutants. Structural changes represent functional aspects of mutant Hbs, such as a significant rise in affinity or a change in cooperativity. Water activity studies conducted as a function of chloride concentration showed that the only Hb desArg follows the thre state model. The other mutant Hbs do not exhibit the Tx state, a fact confirmed by the number of water molecules bound to each Hb during the deoxy-oxy transition. This behavior suggests that the Arginine 92 site could be responsible for chloride binding to Hb, since oxygenation of 92 mutant Hbs cannot be adjusted by the three state model. However, Bohr effect showed that all mutant Hbs released~1 proton in chloride presence, different from HbA that releases ~2, suggesting a role for 141 arginine in the tertiary and quaternary Bohr effect.

Identification of sperm head subpopulations with defined pleiomorphic characteristics in ejaculates of captive Goeldi's monkeys (Callimico goeldii)

The aim of this study was to evaluate the incidence of pleiomorphisms and its influence on the distribution of sperm morphometric subpopulations in ejaculates from the vulnerable Goeldi's monkey (Callimico goeldii) by using a combination of computerized analysis system and Principal Component Analysis (PCA) methods Each sperm head was measured for four primary spermatozoal head dimensional parameters (area [A (μm2)], perimeter [P (μm)], length [L (μm)] and width [W (μm)]) and three head shape derived parameters (ellipticity [(L/W)], elongation [(L-W)/(L+W)] and rugosity [(4πA/P2)]) Six separate subpopulations (SPs) were identified: SP1, constituted by very large, narrow and very elliptical spermatozoa (A=16.85±1.56μm2, W=2.75±0.42μm and ellipticity=2.16±0.24); SP2, characterized by average sized, short, wide and round spermatozoa (A=15.00±1.92μm2, L=5.06±0.49μm, W=3.51±0.31μm and ellipticity=1.44±0.15); SP3, represented by small, wide and slightly round spermatozoa (A=14.95±1.75μm2, W=3.47±0.29μm and ellipticity=1.48±0.14); SP4 included very small, short and very round spermatozoa (A=14.15±2.38μm2, L=4.90±0.57μm and elongation=0.18±0.05); SP5 consisted of average sized and slightly elliptical spermatozoa (A=15.14±1.72μm2 and ellipticity=1.49±0.14); and SP6 included large and round spermatozoa (A=16.30±1.62μm2 and elongation=0.19±0.04) There were differences in the sperm subpopulation distribution (P<0.001) among the five donors analyzed In conclusion, the results of the current study confirmed that the use of computer sperm analysis methods combined with PCA cluster analyses are useful methods to identify, classify, and characterize different sperm head morphometric subpopulations in neotropical primates Broadening our knowledge of C goeldii sperm morphometric abnormalities as well as developing reliable techniques for sperm evaluation may be essential for ex situ conservation of this threatened species © 2012 Elsevier B.V.

O papel das argininas α-92 e α-141 na regulação da função de hemoglobinas por íons cloreto

Conselho Nacional de Desenvolvimento Científico e Tecnológico (CNPq)

Flora polínica da reserva do parque estadual das fontes do Ipiranga (São Paulo, SP, Brasil). Famílias: 141-Boraginaceae e 149-Gesneriaceae

Fundação de Amparo à Pesquisa do Estado de São Paulo (FAPESP)