Rabies surveillance in bats in Northwestern State of Sao Paulo

Conselho Nacional de Desenvolvimento Científico e Tecnológico (CNPq)

Distribution of stream macroalgae in the northwest region of Sao Paulo State, southeastern Brazil

Forty-four stream segments were sampled from May to October in 1992 and 1993 in the northwest region of São Paulo State, southeastern Brazil (19 degrees 45'-21 degrees 25'S, 49 degrees 05'-51 degrees 30'S). Thirty-six macroalgal subgeneric taxa were found and Chlorophyta was the dominant algal group (47% species), followed by Cyanophyta (33.5%), Rhodophyta (14%) and Chrysophyta (5.5%). The most widespread species were Stigeoclonium helveticum (25% sites), Batrachospermum delicatulum and Compsopogon coeruleus (20.5%). Distribution was patchy, with species number per sampling site ranging from 0 to six (3.1 +/- 1.7) and correlated positively with species abundance. Species cover ranged from 0 to 61% of the stream bottom (19.1 +/- 19.7%). Most sites (57%) were dominated by one or two macroalgae species. No significant difference was found between the frequency distribution of variables measured for streams and for total macroalgae, but the most widespread species differed for most parameters and occurred over wider ranges of environmental conditions. Mean species number and abundance were close to values found in distinct regions or biomes of North America. Higher conductance and lower oxygen values, as well as rocky substrata, generally constituted the most favourable combination of conditions for the development of macroalgae in the region. The pattern of strong dominance of few species was considered to be typical for stream macroalgal communities in general.

The genome sequence of the plant pathogen Xylella fastidiosa: The Xylella fastidiosa consortium of the organization for nucleotide sequencing and analysis, Sao Paulo, Brazil

Xylella fastidiosa is a fastidious, xylem-limited bacterium that causes a range of economically important plant diseases. Here we report the complete genome sequence of X. fastidiosa clone 9a5c, which causes citrus variegated chlorosis - a serious disease of orange trees. The genome comprises a 52.7% GC-rich 2,679,305-base-pair (bp) circular chromosome and 'two plasmids of 51,158 bp and 1,285 bp. We can assign putative functions to47% of the 2,904 predicted coding regions. Efficient metabolic functions are predicted, with sugars as the principal energy and carbon source, supporting existence in the nutrient-poor xylem sap. The mechanisms associated with pathogenicity and virulence involve toxins, antibiotics and ion sequestration systems, as well as bacterium-bacterium and bacterium-host interactions mediated by a range of proteins. Orthologues of some of these proteins have only been identified in animal and human pathogens; their presence in X. fastidiosa indicates that the molecular basis for bacterial pathogenicity is both conserved and independent of host. At least 83 genes are bacteriophage-derived and include virulence-associated genes from other bacteria, providing direct evidence of phage-mediated horizontal gene transfer.

Ticks infesting birds in Atlantic Forest fragments in Rio Clam, State of Sao Paulo, Brazil

In the present study, we report tick infestations on wild birds in plots of the Atlantic Forest reforested fragments with native species and plots reforested with Eucalyptus tereticornis in the municipality of Rio Claro, State of Sao Paulo, Brazil. A total of 256 birds were captured: 137 individuals of 33 species, in planted native forest; and 128 individuals of 37 species, in planted Eucalyptus tereticornis forest. Nymphs of two tick species were found on the birds: Amblyomma calcaratum and Amblyomma longirostre, the former was more abundant in the fragments reforested with Atlantic forest native species, and the latter in the fragment reforested with E. tereticornis. New host records were presented for A. calcaratum.

Sensitivity of Colletotrichum lindemuthianum from green beans to fungicides and race determination of isolates from State of Sao Paulo, Brazil

Coordenação de Aperfeiçoamento de Pessoal de Nível Superior (CAPES)

Estudo comparativo da musculatura associada à alimentação entre as raias-viola Rhinobatos percellens e Zapteryx brevirostris (Chondrichthyes, Rhinobatidade)

Coordenação de Aperfeiçoamento de Pessoal de Nível Superior (CAPES)

Biological parameters and population structure of Psammobatis extenta in Ubatuba region, north coast of the State of São Paulo, Brazil

Specimens of the zipper sand skate Psammobatis extenta were collected in the region of Ubatuba off the northern coast of the State of São Paulo, Brazil, monthly for once year (January - December 2000), at 25- to 40-m isobaths. A total of 123 individuals were caught. The total length (TL) of females averaged 224.6 mm, and of males 217 mm. The overall sex ratio was 1:1. Analysis of the length-weight relationship indicated the existence of positive allometry in females, and isometry in males. The length at onset of sexual maturity was determined for both sexes; females reached sexual maturity at smaller sizes than males (TL50 = 230.7 and TL50 = 237.7 mm respectively). Females showed functional parity of both ovaries and uteri. Females that were pregnant or were carrying vitellogenic oocytes were observed during nine of 12 months of the survey, indicating a continuous reproductive cycle. Psammobatis extenta was most abundant from January to April, and again from June to October. Most individuals were collected at the 40-m isobath. Both adults and neonates were collected in the study area. However, adolescent skates were scarce, which either indicates differential occupation of the area, or suggests that the shallow waters of the continental shelf are used as breeding grounds.

Contribuição para o conhecimento da biologia de Cynoscion jamaicensis (Vaillant & Bocourt, 1883), na área entre Cabo de São Tomé (22º04's) e Torres (29º21'S), Brasil

Este trabalho baseia-se na análise de dados obtidos de 1891 exemplares de Cynoscion jamaicensis coletados durante quatro cruzeiros oceanográficos realizados por intermédio do N/Oc. Prof. W. Besnard, na área entre Cabo de Sao Tomé (22º04'S) e Torres (29º30'S), até a isóbata de 200 m, dentro do programa FAUNEC. A espécie distribui-se ao longo da plataforma continental, preferencialmente na região banhada pela agua costeira, com temperaturas entre 27ºC e 18ºC. Ocorrem concentrações de jovens e adultos, indiscriminadamente da distância da costa; os jovens ocorreram, em fevereiro-março, entre 22ºS e 27ºS e, nos demais períodos, entre 23º20'S e 27º30'S, enquanto os adultos distribulram-se, em fevereiro-março e maio, entre 26ºS e 27º30'S e, em setembro e novembro, entre 23ºS e 29º30'S. A desova ocorre entre as latitudes 24º30'S e 26º30'S, durante o fim do inverno-primavera (setembro-novembro). Concordando com o ciclo reprodutivo, o fator de condição mostrou variações cíclicas, com valor mais baixo durante setembro, período de desova. O pico de recrutamento verificou-se em maio, quando ocorreram indivíduos com comprimento total entre 70 e 90 mm, provenientes da desova do ano anterior, que ainda nao completaram um ano de idade. 0 comprimento médio de início da primeira maturação sexual é de 154 mm, sendo que aos 200 mm todos os indivíduos estão aptos para a reprodução. A relação peso total/comprimento total apresentou diferenças estatisticamente significativas entre sexos, com α = 3,25 para machos e 3,10 para fêmeas.

Recent brachiopods from the southern Brazilian shelf: Palaeontological and biogeographical implications

Until recently, the rhynchonelliform (articulated) brachiopod fauna from the Brazilian continental shelf (western South Atlantic) was represented only by the endemic species Bouchardia rosea (Mawe), reported from coastal waters of the states of São Paulo and Rio de Janeiro. The present study, based on samples from coastal (<30 m), shelf, and continental slope waters (99-485 m), documents the South Atlantic brachiopod fauna and shows that this fauna is more widespread, diverse, and cosmopolitan than previously thought. Based on a total of 16,177 specimens, the following brachiopods have been identified: Bouchardia rosea (Family Bouchardiidae), Platidia anomioides (Family Platidiidae), Argyrotheca cf. cuneata (Family Megathyrididae), and Terebratulina sp. (Family Cancellothyrididae). In coastal settings, the fauna is overwhelmingly dominated by Bouchardia rosea. Rare juvenile (<2 mm) specimens of Argyrotheca cf. cuneata were also found at two shallow-water sites. In shelf settings (100-200 m), the fauna is more diverse and includes Bouchardia rosea, Terebratulina sp., Argyrotheca cf. cuneata, and Platidia anomioides. Notably, Bouchardia rosea was found in waters as deep as 485 m, extending the known bathymetric range of this genus. Also, the record of this brachiopod in waters of the state of Parana is the southernmost known occurrence of this species. The genera Platidia and Terebratulina are documented here for the first time for the western South Atlantic. The Brazilian brachiopod fauna shares similarities with those from the Atlantic and Indian shelves of southern Africa, and from the Antarctic, Caribbean and Mediterranean waters. The present-day brachiopods of the western South Atlantic are much more cosmopolitan than previously thought and their Cenozoic palaeobiogeographic history has to be reconsidered from that perspective.

Paisagem natural paleógena da bacia sedimentar de São Paulo no município de guarulhos, estado de São Paulo

Paleogene sediments of this region represent a significant source of water for urban, industrial and agricultural activities. This basin is part of the Southeastern Brazilian Continental Rift, which occupies a large portion of this geographical area. This study aims to present the evolution of the natural Paleogene landscape, through an analysis of its stratigraphic intcrops and underground portions based on the concept of facies and facies associations. A total of nine clastic and separate lithofacies were recognized and grouped into two main facies associations. These data suggest the existence of two depositional interdigitated systems: fluvial braided fans, which were predominant in parts of the northern and central area, and another composed of lacustrine sediments found in its central-south region. The paleogeography herein outlined will help considerably in the detection of new areas for mineral and water resources prospection, as well as in urban planning projects of this region.

Evolution of the South Atlantic passive continental margin in southern Brazil derived from zircon and apatite (U-Th-Sm)/He and fission-track data

The area between São Paulo and Porto Alegre in southeastern Brazil plays a key area to understand and quantify the evolution of the South Atlantic passive continental margin (SAPCM) in Brazil. In this contribution, we present new thermochronological data attained by fission-track and (U-Th-Sm)/He analysis on apatites and zircons from metamorphic, sedimentary and intrusive rocks. The zircon fission-track ages range between 108.4 (15.0) and 539.9 (68.4). Ma, the zircon (U-Th-Sm)/He ages between 72.9 (5.8) and 525.1(2.4). Ma, whereas the apatite fission-track ages range between 40.0 (5.3) and 134.7 (8.0). Ma, and the apatite (U-Th-Sm)/He ages between 32.1 (1.5) and 93.0 (2.5). Ma. The spatial distribution of these ages shows three distinct blocks with a different evolution cut by old fracture zones. While the central block exhibits an old stable block, the Northern and especially the Southern block underwent complex post-rift exhumation. The sample of the Northern block shows two distinct cooling phases in the Upper Cretaceous and the Paleogene to Neogene. After sedimentation of the Permian sandstones the samples of the Central block were never heated up over 100. °C with a following moderate to fast cooling phase in Cretaceous to Eocene time and a fast cooling between Oligocene to Miocene. The five thermal models obtained in the Southern block indicate a complex evolution with three cooling phases. The exhumation events of the three blocks correspond with the Paraná-Etendekka event, the alkaline intrusions due to the Trinidad hotspot, and the evolution of the continental rift basins in SE Brazil and are, therefore, most likely to be the major force for the post-rift evolution of the passive continental margin in SE Brazil, which therefore corresponds to the three main phases of the Andean orogeny. © 2013 Elsevier B.V.

Encalhes de tubarões anequins e de raias-pretas no litoral do estado de São Paulo, sudeste do Brasil: Relato de casos

Stranding of oceanic-pelagic elasmo branchs in the southeastern Brazil are reported. Data comes from animals observed in the coast of São Paulo state, between 1999 and 2012. Nine individuals of two species were recorded: Pteroplatytrygon violacea (n = 5; mostly during the winter) and Isurus oxyrinchus (n = 4; two in the winter and two in the summer). For P. violacea the strandings restricted to the austral winter suggest that the species follows the intrusion of high temperatures water masses recorded in southeastern Brazil during this season, bringing some individuals to shallow waters. For I. oxyrinchus is possible that individuals escaped from hooks of the commercial pelagic long line fishery and suffered injuries in the esophagus and in the gastric wall, stranding due to difficulties in locomotion and feeding. As these stranded sharks were not necropsied and only two animals were observed during the austral summer, we cannot exclude other causes of beaching such diseases or the intrusion of cold water masses in the continental shelf during this season.

Identificação molecular (DNA Barcode) dos peixes da Bacia do Rio Ribeira de Iguape e dos Rios Costieros do Estado de São Paulo

Fundação de Amparo à Pesquisa do Estado de São Paulo (FAPESP)

Hábitos alimentares da raia-viola-de-cara-curta, Zapteryx brevirostris, (Muller & Henle, 1841) (Chondrichthyes, Rhinobatidae), no litoral Norte do Estado de São Paulo

Fundação de Amparo à Pesquisa do Estado de São Paulo (FAPESP)