Genome-wide association study for backfat thickness in Canchim beef cattle using Random Forest approach

Background: Meat quality involves many traits, such as marbling, tenderness, juiciness, and backfat thickness, all of which require attention from livestock producers. Backfat thickness improvement by means of traditional selection techniques in Canchim beef cattle has been challenging due to its low heritability, and it is measured late in an animal's life. Therefore, the implementation of new methodologies for identification of single nucleotide polymorphisms (SNPs) linked to backfat thickness are an important strategy for genetic improvement of carcass and meat quality.Results: The set of SNPs identified by the random forest approach explained as much as 50% of the deregressed estimated breeding value (dEBV) variance associated with backfat thickness, and a small set of 5 SNPs were able to explain 34% of the dEBV for backfat thickness. Several quantitative trait loci (QTL) for fat-related traits were found in the surrounding areas of the SNPs, as well as many genes with roles in lipid metabolism.Conclusions: These results provided a better understanding of the backfat deposition and regulation pathways, and can be considered a starting point for future implementation of a genomic selection program for backfat thickness in Canchim beef cattle. © 2013 Mokry et al.; licensee BioMed Central Ltd.

Serological study of vaccinia virus reservoirs in areas with and without official reports of outbreaks in cattle and humans in São Paulo, Brazil

Vaccinia virus (VACV), the etiological agent of an exanthematic disease, has been associated with several bovine outbreaks in Brazil since the end of the global vaccination campaign against smallpox. It was previously believed that the vaccine virus used for the WHO global campaign had adapted to an unknown wild reservoir and was sporadically re-emerging in outbreaks in cattle and milkers. At present, it is known that Brazilian VACV is phylogenetically different from the vaccinia virus vaccinal strain, but its origin remains unknown. This study assessed the seroprevalence of orthopoxviruses in domestic and wild animals and farmers from 47 farms in three cities in the southwest region of the state of São Paulo with or without official reports of outbreaks in cattle or humans. Our data indicate a low seroprevalence of antibodies in wild animals and raise interesting questions about the real potential of wild rodents and marsupials as VACV reservoirs, suggesting other routes through which VACV can be spread. © 2013 The Author(s).

Effects of a single nucleotide polymorphism in the leptin gene on the productive traits of dairy buffaloes (Bubalus bubalis)

The gene responsible for coding the leptin hormone has been associated with productive and reproductive traits in cattle. In dairy cattle, different polymorphisms found in the leptin gene have been associated with several traits of economic interest, such as energy balance, milk yield and composition, live weight, fertility and dry matter consumption. The aim of this study was to detect genetic variability in the leptin gene of buffaloes and to test possible associations with milk yield, fat and protein percentages, age at first calving and first calving interval. Three genotypes (AA, AG and GG) were identified by polymerase chain reaction-restriction fragment length polymorphism, which presented genotypic frequencies of 0.30, 0.54 and 0.16, respectively. The allele frequencies were 0.57 for the A allele and 0.43 for the G allele. No significant effects were found in the present study, but there is an indicative that leptin gene affects lipid metabolism. © 2013 Springer Science+Business Media Dordrecht.

Molecular epidemiology and extended-spectrum β-lactamases production of klebsiella pneumoniae isolated from three dairy herds

Fundação de Amparo à Pesquisa do Estado de São Paulo (FAPESP)

Ocorrência da brucelose e tuberculose bovina e percepção de riscos de produtores de leite do município de Paranaíba, Mato Grosso do Sul: Gilson Luiz Piva Filho. -

Pós-graduação em Ciência Animal - FMVA

Ocorrência de anticorpos anti-Neospora caninum em rebanhos bovinos leiteiros e de corte da região de Presidente Prudente-SP

Pós-graduação em Medicina Veterinária - FMVZ

Análise energética da produção de leite bovino em explorações familiares na região de Botucatu-SP

Pós-graduação em Agronomia (Energia na Agricultura) - FCA

Genetic relationship between reproductive traits in Nellore cattle

Pós-graduação em Genética e Melhoramento Animal - FCAV

Estudo da interação genótipo-ambiente por meio de modelos de normas de reação em bovinos de corte da raça Nelore

Coordenação de Aperfeiçoamento de Pessoal de Nível Superior (CAPES)

Análise genética da idade ao primeiro parto e da produtividade acumulada em bovinos da raça Nelore

Coordenação de Aperfeiçoamento de Pessoal de Nível Superior (CAPES)

Interação genótipo – ambiente no peso ao sobreano na raça Nelore

Fundação de Amparo à Pesquisa do Estado de São Paulo (FAPESP)

Estimativas de (co) varância genética de pesos do nascimento até a maturidade em rebanhos da raça Nelore usando modelos de regressão aleatória e de características múltiplas

Fundação de Amparo à Pesquisa do Estado de São Paulo (FAPESP)

Previsão de séries temporais financeiras por meio de redes neurais dinâmicas e processos de transformação de dados: uma abordagem empírico-comparativa

Conselho Nacional de Desenvolvimento Científico e Tecnológico (CNPq)

Balneabilidade, índice de qualidade da água e bioensaios de toxicidade nas praias do reservatório de Ilha Solteira/SP

Fundação de Amparo à Pesquisa do Estado de São Paulo (FAPESP)

Diagnóstico da influência da bacia hidrográfica na qualidade da água do Ribeirão Baguaçu (Araçatuba, SP)

Pós-graduação em Engenharia Civil - FEIS