IVF/ICSI outcomes after culture of human embryos at low oxygen tension: a meta-analysis

Background: Improved pregnancy, implantation, and birth rates have been reported after the use of reduced O2 concentration during embryo culture, mainly due to a reduction of the cumulative detrimental effects of reactive oxygen species. However, some studies have failed to report any positive effects. The objective of this meta-analysis was to evaluate the effect of a low-O2 environment on IVF/intracytoplasmic sperm injection (ICSI) outcomes.Methods: All available published and ongoing randomised trials that compared the effects of low (similar to 5%; OC similar to 5) and atmospheric (similar to 20%; OC similar to 20) oxygen concentrations on IVF/ICSI outcomes were included. Search strategies included online surveys of databases from 1980 to 2011. The outcomes measured were fertilisation rate, implantation rate and ongoing pregnancy rates. The fixed effects model was used to calculate the odds ratio.Results: Seven studies were included in this analysis. The pooled fertilisation rate did not differ significantly (P = 0.54) between the group of oocytes cultured at low O2 tension and the group at atmospheric O2 tension. Concerning all cycles, the implantation (P = 0.06) and ongoing pregnancy (P = 0.051) rates were not significantly different between the group receiving transferred sets containing only OC similar to 5 embryos and the group receiving transferred sets with only OC similar to 20 embryos. In a meta-analysis performed for only those trials in which embryos were transferred on day 2/3, implantation (P = 0.63) and ongoing pregnancy (P = 0.19) rates were not significantly different between the groups. In contrast, when a meta-analysis was performed using only trials in which embryos were transferred on days 5 and 6 (at the blastocyst stage), the group with transferred sets of only OC similar to 5 embryos showed a statistically significantly higher implantation rate (P = 0.006) than the group receiving transferred sets with only OC similar to 20 embryos, although the ongoing pregnancy (P = 0.19) rates were not significantly different between the groups.Conclusions: Despite some promising results, it seems too early to conclude that low O2 culture has an effect on IVF outcome. Additional randomised controlled trials are necessary before evidence-based recommendations can be provided. It should be emphasised that the present meta-analysis does not provide any evidence that low oxygen concentration is unnecessary.

Genetic parameters of racing performance traits of Quarter horses in Brazil

The data used in the present study were recorded at the Jockey Club of Sorocaba for 5094 racing performance of 1350 Quarter Horses at the Paulista Race Track of Sorocaba, state of São Paulo, Brazil, from 1991 to 1997. The considered traits were time and final rank. The model used in analysis included random animal and permanent environmental effects, and race, sex, age and origin as fixed effects. The variance and covariance components were estimated by the restricted maximum likelihood for an animal model, using the derivative-free process method and the MTDFREML software. For the time, heritability was 0.17 (0.05), while estimate of repeatability 0.55 (0.05). The lower heritability for the final rank, 0.13 (0.04), indicate that this trait is not the most appropriate one for inclusion in programs of Quarter horse selection in Sorocaba racetrack. The repeatability estimate for rank was 0.44 (0.04) and the genetic correlation between this trait and time was 0.99.

Genetic and environmental parameters for racing time at different distances in Brazilian Thoroughbreds

The aim of the present study was to investigate genetic parameters for racing time in Thoroughbred horses racing at distances between 1000 and 1600 m subdivided into 100-m intervals. The data provided by TURFETOTAL Ltda comprised races that occurred in the Gavea and Cidade Jardim race tracks over a period of 11 years (1992-2002) and consisted of 32 145 races and 238 890 time records. The variance components necessary to obtain the heritability and repeatability estimates of the traits studied were estimated with the MTDFREML program, and animal age at race (3 years old or younger, 4, 5 and older than 5 years), sex (male and female), number of races (1-32 145), and postposition at start (1-11) as fixed effects, and animal and permanent environmental random effects were included in a one-trait animal model. Males were significantly superior to females at all distances. Excluding the 1100 m distance, animals 4 years of age were significantly faster than the mean of the other ages for all distances analysed. Horses older than 5 years showed a significantly lower performance than the mean of the other ages for all distances analysed, except for the 1100 m. Postpositions one and two did not differ significantly from one another for any of the distances analysed. These two inner positions both together varied from the other positions depending on race length. The components of additive genetic and permanent environmental variance varied in a similar way, tending to decrease with increasing racing distance, and the other temporary environmental variance almost doubled from 1000 to 1600 m. As was the case for the additive genetic and environmental variances, heritability and repeatability estimates tended to decrease with increasing distance, indicating that selection based on racing time will be less successful when the racing distance increases.

Genetic and environmental factors that affect the best time of Thoroughbred horses in Brazil

On the basis of information provided by the Brazilian Association of Race Horse Breeders, we analysed the racing performance of 947 Thoroughbred horses in races held from 1985 to 1992. The performance was evaluated using the best, time of the animals. The variance component was obtained by the derivative-free restricted maximum likelihood method, and the model used contained fixed effects of the racing month and year, sex, race track, track condition, animal age, number of competitors in race, and distance, and the random animal effect. The low heritability estimate obtained (0.12) indicates that selection based on animal phenotypic value must induce small genetic changes in this trail.

Growth curve of Nellore calves reared on natural pasture in the Pantanal

Weight-age and hip height-age relations of Nellore calves, from birth to 10 months old were fitted using a logistic model including sex and year of birth as fixed effects. Calves and their dams were reared on natural pasture using continuous grazing system. The crude protein content and total digestible nutrients were analyzed for pasture selected by the animals. The weights of the calves were adjusted to 205 days and 365 days. There were no significant effects of sex and birth year on the growth curve parameters, but there were significant effects of sex on hip height. The average weight (a parameter) at 10 months of age was 170 kg and the inflection point was observed at 93.5 days old. When weight-age and hip height-age curves were combined in the same graph, the intersection occurred at 142 days. The number of days to gain 160 kg from birth to 205 days of age (adjusted) and number of days to gain 240 kg from 205 days to slaughter was different between the birth years, which were probably due to the quality of the natural pastures. It is necessary to implement nutritional management strategies such as high quality pasture and/or feeding supplementation for calves once they reach three months of age.

Avaliação genética multirracial para ganho de peso pré-desmama em bovinos de uma população composta

Objetivou-se neste trabalho estudar modelos com efeitos não-aditivos diretos e maternos em uma população composta em clima tropical, tentando minimizar esses efeitos para obtenção dos valores genéticos dos animais avaliados. Foram utilizados dados de animais de uma população composta, por meio da comparação de três modelos que incluíram os efeitos fixos de grupo contemporâneo, ordem de parto e heterose direta e materna e os efeitos aleatórios de efeito genético aditivo direto e materno. As análises foram realizadas em duas etapas; na primeira foram estudadas as estimativas dos efeitos raciais e de heterose individual e materna e na segunda etapa, calculadas as variâncias, herdabilidades e os valores genéticos dos animais. O efeito materno, quando não foi considerado no modelo, pareceu superestimar o efeito aditivo racial. Os efeitos aditivos raciais, racial materno e de heterose individual e materna influenciaram significativamente o ganho médio diário no pré-desmame, obtendo-se diferentes estimativas entre os tipos biológicos. Considerando o arquivo de dados corrigidos para os efeitos não-aditivos diretos e maternos, as herdabilidades direta e materna foram de 0,22 e 0,20, respectivamente. Os efeitos racial materno e de heterose individual e materna foram importantes fontes de variação para o ganho médio diário no pré-desmame e devem ser considerados durante a avaliação genética de uma população multirracial.

Genetic parameters for stayability in Murrah buffaloes

Conselho Nacional de Desenvolvimento Científico e Tecnológico (CNPq)

Genetic parameter estimates and response to selection for weight and testicular traits in Nelore cattle

Coordenação de Aperfeiçoamento de Pessoal de Nível Superior (CAPES)

Parturition intervals and distributions of parturitions by months of buffalo in Southern and South-eastern Brazil

Reproductive rate is an important component of economic success in livestock production. Parturition interval (IEP) is a direct measure of the productivity of the animal. Long IEP reduce the number of calves produced per year. The objective this study was to determine the distribution of parturitions across month and to evaluate factors affecting IEP. The data included 7,588 parturitions of Murrah, Mediterranean and Carabobo buffalo from 10 herds in Southern and South-eastern Brazil. The analysis of distribution of parturitions evaluated the effects of month, year and their interaction on birth date of calves by using a Chi-Square test in SAS PROC FREQ (SAS Institute, Cary, NC, USA). Parturition intervals (n = 2,630) were evaluated using analysis of variance in SAS PROC GLM. The model for IEP included the fixed effects of season (December to May = 1, June to November = 2), year, season x year, sex of the preceding parturition, age of weaning of the previous calf, and herd. All sources of variation were significant (P<0.0001) except sex of the preceding parturition (P <0.85). The mean IEP was 446.7 +/- 10.4 days, for seasons 1 and 2 IEP were 419.8 +/- 11.3 and 473.6 +/- 40.7 days, respectively, a difference of 54 days. As weaning age increased there was a lengthening of IEP. Buffalo in Brazil showed seasonal parturition with calving concentrated from January to April, although the frequency by month differed across years (P<0.0001). These months also had the lowest calving interval.

Heterogeneidade dos componentes de variância na produção de leite e seus efeitos nas estimativas de herdabilidade e repetibilidade

It was evaluated the heterogeneity of components of phenotypic variance and its effects on the heritability and repeatability estimates for milk yield in Holstein cattle. The herds were grouped according to their level of production (low, medium and high) and evaluated in the non-transformed, square-root and logarithmic scale. Variance components were estimated using a restricted maximum likelihood method based on an animal model that included fixed effects of herd-year-season, and as covariates the linear effect of lactation duration and the linear and quadratic effects of cow's age at calving and the random direct additive genetic, permanent environment and residual effects. In the non-transformed scale all the variance components were heterogeneous. on this scale, residual and phenotypic variance components were associated positively with the level of production while in logarithmic scale that association was negative. Estimates of heritability were more affected than the repeatability for the phenotypic variance heterogeneity and their components. The of selection process efficiency for milk production could be affected by the level of production which was considered for genetic parameters estimation.

Composição físico-química e produção do leite de búfalas da raça Mediterrâneo no oeste do Estado de São Paulo

O objetivo do presente trabalho foi avaliar os componentes físico-químicos e a produção do leite de búfalas da raça Mediterrâneo criadas no Oeste do Estado de São Paulo. Utilizaram-se 1438 controles provenientes de 152 lactações, controladas no período de 1985 a 1995, na Estação Experimental de Zootecnia de Andradina. Os dados foram analisados por meio do procedimento GLM do Programa SAS. O modelo estatístico para produção de leite teve como fontes de variação (FV) os efeitos fixos de mês do controle e lactação. Para as demais características, usou-se o mesmo modelo, acrescido da produção de leite como covariável. Todas as fontes de variação do modelo foram significativas. As médias ajustadas foram 4,52 kg, 4,13%, 6,59%, 17,01%, 10,47% e 18,98°D, respectivamente, para produção de leite, porcentagens de proteína totais, gordura, extrato seco total, extrato seco desengordurado e acidez. Verificou-se elevado teor de nutrientes no leite, evidenciando a boa qualidade do produto.

Mapping quantitative trait loci in Gallus gallus using principal components

Fundação de Amparo à Pesquisa do Estado de São Paulo (FAPESP)

Análise genética de características de crescimento e perímetro escrotal em bovinos da raça Brangus

O objetivo deste trabalho foi estimar os parâmetros genéticos e a tendência genética de características de crescimento e perímetro escrotal em animais da raça Brangus. Dados de 6.340 animais, criados em cinco propriedades nas regiões Sul, Sudeste e Centro‑Oeste do Brasil, foram utilizados para avaliação de: perímetro escrotal (PE) ao sobreano e pesos ao nascer (PN), à desmama (P205), ao ano (P365) e ao sobreano (P550). Os componentes de covariância foram estimados por inferência bayesiana, sob modelo animal, com efeitos fixos de grupos de contemporâneos e de classe de idade da vaca ao parto, e efeitos aleatórios genético aditivo direto e residual. Os efeitos aleatórios genético materno e de ambiente permanente materno foram incluídos somente para PN e P205. O efeito linear da covariável idade do animal na mensuração foi considerado para todas as características analisadas, exceto PN. As médias observadas foram 33,6, 184,6, 235,9, 344,9 e 33,8 cm para PN, P205, P365, P550 e PE, respectivamente, e as tendências genéticas foram de ‑0,001, 0,107, 0,177, 0,217 kg por ano e 0,001 cm por ano. As estimativas das herdabilidades direta e materna variaram de 0,16 (PN) a 0,61 (PE) e de 0,08 (PN) a 0,09 (P205), indicativas de que as características avaliadas são passíveis de seleção para o melhoramento genético da raça Brangus.

Fatores do ambiente sobre o peso ao desmame de bezerros da raça nelore em regiões tropicais brasileiras

Este trabalho teve o objetivo de estudar a influência de efeitos não genéticos sobre o peso ao desmame de 105.465 bezerros da raça Nelore, nascidos em oito diferentes regiões brasileiras, no período de 1978 a 1994. A análise estatística foi realizada utilizando-se o método dos quadrados mínimos, procedimento GLM (SAS, 1996), com um modelo estatístico contendo como fontes de variação os efeitos fixos de sexo, mês e ano de nascimento do bezerro, região, fazenda dentro de região, grupo de idade da vaca e, como efeitos aleatórios, touro e o erro. Todas as fontes de variação do modelo foram significativas (P<0,0001). A importância desses efeitos não genéticos sobre o peso aos 205 dias de idade de bezerros da raça Nelore evidenciam a necessidade de se fazer ajustes para os mesmos, visto que estes influenciaram sobre a característica estudada.

Procedimento MIXED do SAS® para análise de modelos mistos

O modelo misto consiste numa importante classe de modelos que tem sido tradicionalmente analisada por meio de procedimentos da análise de variância. Nos modelos mistos, três aspectos são fundamentais: estimação e testes de hipóteses dos efeitos fixos, predição dos efeitos aleatórios e estimação dos componentes de variância. Na análise de modelos lineares mistos desbalanceados, a estimação dos componentes de variância é de fundamental importância e depende da estrutura de covariâncias e dos métodos de estimação utilizados. Nesse contexto, este artigo pretende apresentar os principais métodos de estimação e de análise utilizados no estudo de modelos lineares mistos com estruturas gerais de covariâncias nos efeitos aleatórios, disponíveis no procedimento MIXED, do SAS (Statistical Analysis System).