Determination of disease biomarkers in Eucalyptus by comprehensive two-dimensional gas chromatography and multivariate data analysis

In this paper is reported the use of the chromatographic profiles of volatiles to determine disease markers in plants - in this case, leaves of Eucalyptus globulus contaminated by the necrotroph fungus Teratosphaeria nubilosa. The volatile fraction was isolated by headspace solid phase microextraction (HS-SPME) and analyzed by comprehensive two-dimensional gas chromatography-fast quadrupole mass spectrometry (GC. ×. GC-qMS). For the correlation between the metabolic profile described by the chromatograms and the presence of the infection, unfolded-partial least squares discriminant analysis (U-PLS-DA) with orthogonal signal correction (OSC) were employed. The proposed method was checked to be independent of factors such as the age of the harvested plants. The manipulation of the mathematical model obtained also resulted in graphic representations similar to real chromatograms, which allowed the tentative identification of more than 40 compounds potentially useful as disease biomarkers for this plant/pathogen pair. The proposed methodology can be considered as highly reliable, since the diagnosis is based on the whole chromatographic profile rather than in the detection of a single analyte. © 2013 Elsevier B.V..

Search for methylation-sensitive amplification polymorphisms in mutant figs

Fig (Ficus carica) breeding programs that use conventional approaches to develop new cultivars are rare, owing to limited genetic variability and the difficulty in obtaining plants via gamete fusion. Cytosine methylation in plants leads to gene repression, thereby affecting transcription without changing the DNA sequence. Previous studies using random amplification of polymorphic DNA and amplified fragment length polymorphism markers revealed no polymorphisms among select fig mutants that originated from gamma-irradiated buds. Therefore, we conducted methylation-sensitive amplified polymorphism analysis to verify the existence of variability due to epigenetic DNA methylation among these mutant selections compared to the main cultivar 'Roxo-de-Valinhos'. Samples of genomic DNA were double-digested with either HpaII (methylation sensitive) or MspI (methylation insensitive) and with EcoRI. Fourteen primer combinations were tested, and on an average, non-methylated CCGG, symmetrically methylated CmCGG, and hemimethylated hmCCGG sites accounted for 87.9, 10.1, and 2.0%, respectively. MSAP analysis was effective in detecting differentially methylated sites in the genomic DNA of fig mutants, and methylation may be responsible for the phenotypic variation between treatments. Further analyses such as polymorphic DNA sequencing are necessary to validate these differences, standardize the regions of methylation, and analyze reads using bioinformatic tools. © FUNPEC-RP.

Fertilisation residues alter leaf scleromorphy in an evergreen savannah shrub (Maprounea brasiliensis, Euphorbiaceae)

In the present study, we examined how residues of nitrogen (N), phosphorus (P) and calcium (Ca) fertilisers affect leaf anatomical traits in Maprounea brasiliensis (Euphorbiaceae), a typical and dominant cerrado (Brazilian savannah) species adapted to dystrophic soils. We predicted that fertiliser residues would alter qualitative and quantitative aspects of M. brasiliensis leaves and would decrease their scleromorphy. Leaves were sampled from plants that were growing in soils previously fertilised with N, P and Ca and in plants that were growing in soils without fertiliser residues. We measured the thickness of the cuticle, the epidermis of adaxial and abaxial surfaces, thickness of palisade parenchyma and spongy parenchyma, total thickness of the leaf, total area of the midrib and leaf mass per area (LMA). We found that plants under fertiliser residues produced fewer scleromorphic leaves with low LMA, thinner cuticle and epidermis and thicker palisade and spongy parenchyma. They also showed a decrease in the size and area occupied by the leaf midvein. However, plants under fertiliser residues produced similar leaf thickness as did the plants in the control group. Our results showed that residual effects of fertilisation changed structural patterns of a typical species of cerrado. Thus, further studies about fertilisation effects on leaf traits are needed because larger areas of the central cerrado are being occupied for agricultural production. © 2013 CSIRO.

Antifúngicos naturais e sintéticos: estudo dos mecanismos de ação em sistema de infecção in vitro empregando cepas de Cryptococcus

Coordenação de Aperfeiçoamento de Pessoal de Nível Superior (CAPES)

Defoliation patterns in signal grass tillers with varying heights in the same pasture

The experiment was carried out to evaluate the patterns of defoliation in plants of various heights in the same pasture of Brachiaria decumbens cv. Basilisk under continuous stocking with cattle. Four plant heights were evaluated (10, 20, 30 and 40 cm) in the same managed sward, with mean height equal to 25 cm. A randomized blocks design was used, with two replications. Defoliation frequency increased linearly along with plant height in the same pasture. Defoliation intensity, number of defoliations in leaf blade and percentage of leaf blade grazed per tiller also increased linearly along with plant height. The defoliation interval decreased linearly according to plant height. The quadratic model was adequately fitted into grazing efficiency data, reaching the highest value (98%) at the sward site with 35 cm plants. The percentage variation in signal grass height showed a negative linear response with initial plant height. The structure of the pasture, characterized by the diversity in plant heights, is simultaneously the cause and consequence of the variability in defoliation patterns in individual tillers, which occur on the horizontal plane of the pasture.

Candidatus Liberibacter asiaticus Titers in Citrus and Acquisition Rates by Diaphorina citri Are Decreased by Higher Temperature

Conselho Nacional de Desenvolvimento Científico e Tecnológico (CNPq)

Heavy metals in cowpea (Vigna unguiculata L.) after tannery sludge compost amendment

Conselho Nacional de Desenvolvimento Científico e Tecnológico (CNPq)

Cell cycle kinetics, apoptosis rates, DNA damage and TP53 gene expression in bladder cancer cells treated with allyl isothiocyanate (mustard essential oil)

Fundação de Amparo à Pesquisa do Estado de São Paulo (FAPESP)

Copper oxychloride fungicide and its effect on growth and oxidative stress of potato plants

Conselho Nacional de Desenvolvimento Científico e Tecnológico (CNPq)

Overexpression of UCP1 in tobacco induces mitochondrial biogenesis and amplifies a broad stress response

Fundação de Amparo à Pesquisa do Estado de São Paulo (FAPESP)

Using phenological cameras to track the green up in a cerrado savanna and its on-the-ground validation

Fundação de Amparo à Pesquisa do Estado de São Paulo (FAPESP)

Nitrogen budget in a soil-plant system after brachiaria grass desiccation

Fundação de Amparo à Pesquisa do Estado de São Paulo (FAPESP)

Rice-Straw Mulch Reduces the Green Peach Aphid, Myzus persicae (Hemiptera: Aphididae) Populations on Kale, Brassica oleracea var. acephala (Brassicaceae) Plants

Conselho Nacional de Desenvolvimento Científico e Tecnológico (CNPq)

Effects of potassium application and soil moisture on the growth of Corymbia citriodora plants

Fundação de Amparo à Pesquisa do Estado de São Paulo (FAPESP)

The Influence of Municipal Treated Wastewater on Morpho-Physiological Characteristics of Eucalyptus Plants

The effects of municipal-treated wastewater on growth and gas exchange characteristics were studied in eucalyptus plants cultivated in a greenhouse under continuous sub irrigation with 70 % Long Ashton solution as a control, 100 % treated wastewater, and treated wastewater diluted 50 % with tap water. Irrigation with wastewater resulted in a reduction of total dry matter per plant and the shoot-to-root ratio and increased specific leaf mass, irrespective of the dilution. The gas exchange characteristics were adversely affected by the irrigation with wastewater, with photosynthetic rates been negatively affected. Total chlorophyll and carotenoids content were reduced in plants grown under treated wastewater. The results demonstrated that when the eucalyptus plants were grown under treated wastewater as the only source of mineral nutrients they were able to produce nearly 50 % of the dry matter produced by the plants grown under appropriate mineral nutrient supply, irrespective of the dilution. Therefore, the contribution of mineral nutrients and organic matter from the treated wastewater used as agricultural irrigation will be significant in lower the fertilizer rates without reducing dry matter production per plant.