Kinetic and mechanistic characterization of the Sphingomyelinases D from Loxosceles intermedia spider venom

Envenomation by arachnids of the genus Loxosceles leads to local dermonecrosis and serious systemic toxicity mainly induced by sphingomyelinases D (SMase D). These enzymes catalyze the hydrolysis of sphingomyelin resulting in the formation of ceramide-phosphate and choline as well as the cleavage of lysophosphatidyl choline generating the lipid mediator lysophosphatidic acid. We have, previously, cloned and expressed two functional SMase D isoforms, named P1 and P2, from Loxosceles intertnedia venom and comparative protein sequence analysis revealed that they are highly homologous to SMase I from Loxosceles laeta which folds to form an (alpha/beta)(8) barrel. In order to further characterize these proteins, pH dependence kinetic experiments and chemical modification of the two active SMases D isoforms were performed. We show here that the amino acids involved in catalysis and in the metal ion binding sites are strictly conserved in the SMase D isoforms from L. intermedia. However, the kinetic studies indicate that SMase P1 hydrolyzes sphingomyelin less efficiently than P2, which can be attributed to a substitution at position 203 (Pro-Leu) and local amino acid substitutions in the hydrophobic channel that could probably play a role in the substrate recognition and binding. (c) 2005 Elsevier Ltd. All rights reserved.

Genetic diversity of Stryphnodendron adstringens (Mart.) Coville determined by AFLP molecular markers

Bark extracts of Stryphnodendron adstringens (Mart) Coville a Leguminosae species, well known in Brazil as barbatimao, are popularly used as healing agent. The objective of this work was to determine the genetic diversity of S. adstringens populations and to correlate genetic distances to the production of tannins. S. adstringens accessions from populations found in Cerrado regions in the states of Goias, Minas Gerais and São Paulo were analyzed using the AFLP (Amplified Fragment Length Polymorphism) technique. A total of 236 polymorphic bands were scored and higher proportion of genetic diversity was found inter populations (70.9%), rather than intra populations (29.1%). F-ST value was found to be significantly greater than zero (0.2906), demonstrating the complex genetic structure of S. adstringens populations. Accessions collected in Cristalina, GO, showed higher percentage of polymorphic loci (87.3%) and the highest genetic diversity. The lowest genetic variability was detected among accessions from the population growing in Caldas Novas, GO. The genetic distance among populations was estimated using the Unweighted Pair Group Method with Arithmetic Mean (UPGMA), which grouped populations into 3 clusters. Moreover, chemotypes with tannin concentration above 40% showed higher genetic similarity. AFLP analysis proved to be an efficient gene mapping technique to determine the genetic diversity among remaining populations of S. adstringens. Obtained results may be employed to implement further strategies for the conservation of this medicinal plant. (C) 2011 Elsevier Ltd. All rights reserved.

Mirmecofauna em um fragmento de floresta atlântica urbana no município de Marília, Brasil

The aim of this study was to verify the influence of the habitat fragmentation on the Ant Fauna in an urban fragment of Semideciduous Seasonal Atlantic Forest located in the municipality of Marilia, São Paulo, Brazil. The studied fragment was divided into three environments in relation to edge: "Edge" (2m), "Transition" (30m) and "Interior" (90m). By using pitfalls traps and attractive baits there were done nine samples between November 2007 and February 2008. There were collected 3.873 individuals distributed into five subfamilies, 19 genera and 33 species. Five species were abundant on three studied environments: Ectatomma sp1, Mycocepurus goeldii, Paratrechina sp1, Pheidole sp2, Trachymyrmex sp1, Wasmannia auropunctata. The edge and transition environments presented the lower Simpsons diversity index and higher species dominance. However, it was observed little variation between these parameters between environments. Faunistic similarity between environments, expressed by Jaccard's similarity index showed high similarity between all studied environments. Because the studied site is an urban fragment, the similarity found between these areas can be related to habitat fragmentation process, an historical of constant anthropic perturbation and low local colonization rates. However, we suggest that a posteriori evaluation should be done with other arthropods groups like spiders and beetles in due to understand the changes that occur in urban fragments and support the choice of conservation and management actions in favor of this important forest remnant localized in urban area of Marilia, São Paulo, Brazil.

Levantamento fitossociológico em pastagens degradadas sob condições de várzea

objective of this study was to identify the weed community in areas of pasture. The phyto-sociological survey was conducted during November and December, 2009 in three regions: two located in Tangara da Serra-MT (region A = areas surrounding the town; and region B = areas in the Antonio Conselheiro Settlement and one area in Barra of the Bugres-MT (region C). Five properties were analyzed in each region, each containing 10 plots of 25 m(2). The weed species were counted and identified in the plots. Data were analyzed by calculating density, frequency, abundance, relative density, relative frequency, relative abundance, importance value index (IVI), and similarity index. Thirty-eight weed species were identified, distributed among 18 families, with Asteraceae (7), Fabaceae (6), Arecaceae (3), Euforbiaceae (3) and Poaceae (3) being the most representative in number of species. The species most frequently found were: region A - Sida spp. (IVI: 127.93) and Eragrostis plana (IVI: 42.18); region B - Eragrostis plana (IVI: 54.78), Mimosa wedelliana (IVI: 52.39), and Sida spp. (IVI: 50.30); and region C - Sida spp. (IVI: 73.92), and Mimosa wedelliana (IVI: 26.55). A significant similarity was found between regions A and B (52.63%) and between regions B and C (50.98%).

Dinâmica espaço-temporal de taxocenoses de crisopídeos (Neuroptera: Chrysopidae) em ecossistemas naturais

In order to study the interactions of green lacewings toxocenosis on natural ecossystems, samplings were carried out in the Parque Ecologic Quedas do Rio Bonito, located in Lavras, Alto Rio Grande region, South of Minas Gerais, Brazil. The species inventory was accomplished in two vegetation types: semi-evergreen forest and open field formations, including areas of montane grassland, rocky montane grassland and "cerrado". Insects were captured with a butterfly net during 2h, walking through each vegetation formation. Sampling resulted in 1,948 specimens belonging to 30 species, of which 14 were Chrysopini and 16 Leucochrysini. Representatives of these tribes were observed both in forest and in open field formations. Species of the genera Ceraeochrysa, Chrysoperla, Chrysopodes, Plesiochrysa and Leucochrysa were found in forests and in open field formations, except for Plesiochrysa. The highest richness and diversity of species were observed in the forest. The similarity index among the communities of green lacewings in the studied areas was 27%.

Effects of tiletamine/zolazepam-romifidine-atropine in ocelots (Leopardus pardalis)

Objectives: To evaluate the effects of a combination of tiletamine-zolazepam-romifidine-atropine in ocelots. Design: Prospective experimental trial. Animals: Eight captive adult ocelots (three females and five males). Methods: Calculated doses of tiletamine-zolazepam (3.75 mg kg -1), romifidine (50 μg kg-1) and atropine (0.04 mg kg-1) were administered intramuscularly. After immobilization, animals were weighed and the real doses determined. Heart rate, respiratory frequency, noninvasive systolic, diastolic, and mean arterial pressure, arterial oxygen hemoglobin saturation, and rectal temperature were measured. Data were analyzed by means of ANOVA for repeated measures, followed by the Tukey test to compare values over time. Results: Doses administered were 3.4 ± 0.6 mg kg-1 of tiletamine-zolazepam, 0.04 ± 7.0 mg kg-1 of romifidine, and 0.03 ± 0.007 mg kg-1 of atropine. The mean time to recumbency and duration of immobilization were 7.0 ± 4.5 and 109.2 ± 27.9 minutes, respectively. The median times to standing and walking were 52.3 [0-90] and 2.3 [0-69.3] minutes, respectively. A decrease in heart rate was observed 45 minutes following drug administration. Arterial blood pressure was maintained during the study. Conclusions and clinical relevance: This protocol produced good immobilization in ocelots with minimal changes over time in cardiovascular parameters.

Comparison of β-1,3-glucanase production by Botryosphaeria rhodina MAMB-05 and Trichoderma harzianum Rifai and its optimization using a statistical mixture-design

Botryosphaeria rhodina MAMB-05 produced β-1,3-glucanases and botryosphaeran when grown on glucose, while Trichoderma harzianum Rifai only produced the enzyme. A comparison of long-term cultivation (300h) by B. rhodina demonstrated a correlation between the formation of botryosphaeran (48h) and its consumption (after 108h), and de-repression of β-1,3-glucanase synthesis when glucose was depleted from the nutrient medium, whereas for T. harzianum enzyme production commenced during exponential growth. Growth profiles and levels of β-1,3-glucanases produced by both fungi on botryosphaeran also differed, as well as the production of β-1,3-glucanases and β-1,6-glucanases on glucose, lactose, laminarin, botryosphaeran, lasiodiplodan, curdlan, Brewer's yeast powder and lyophilized fungal mycelium, which were dependent upon the carbon source used. A statistical mixture-design used to optimize β-1,3-glucanase production by both fungi evaluated botryosphaeran, glucose and lactose concentrations as variables. For B. rhodina, glucose and lactose promoted enzyme production at the same levels (2.30UmL -1), whereas botryosphaeran added to these substrates exerted a synergic effect favorable for β-glucanase production by T. harzianum (4.25UmL -1). © 2010 Elsevier B.V.

Cellular automata-based spatial dynamic modeling for analyzing urban land use change

This paper analyzes land use change in Rio Claro City and its surroundings, located in the southeastern state of Sao Paulo, in the period from 1988 to 1995, using air-borne digital imagery and a cellular automata model. The simulation experiment was carried out in the Dinamica EGO platform and the results revealed a constrained urban sprawl, resulting from both the densification of residential areas implemented in previous years and the economic recession that led to an internal financial crisis in Brazil during the early 1990s. The simulation outputs were validated using a multi-resolution procedure based on a fuzzy similarity index and showed a satisfactory fitness in relation to the historical reference data. © 2013 IEEE.

Qualidade de ovos embalados com atmosfera modificada e armazenados em temperatura ambiente

Conselho Nacional de Desenvolvimento Científico e Tecnológico (CNPq)

Utilização de técnicas multivariadas na avaliação da divergência genética de populações de girassol (Helianthus annuus L.)

Pós-graduação em Agronomia (Energia na Agricultura) - FCA

Estudo de aspectos químicos, biológicos e biossintéticos em Piper fuligineum Kunth(Piperaceae)

Pós-graduação em Química - IQ

Análise através do método dos elementos finitos das tensões desenvolvidas no reborbo alveolar sob as próteses totais com três diferentes conceitos oclusais

Pós-graduação em Reabilitação Oral - FOAR

Recurrent genomic alterations in sequential progressive leukoplakia and oral cancer: drivers of oral tumorigenesis?

A significant proportion (up to 62) of oral squamous cell carcinomas (OSCCs) may arise from oral potential malignant lesions (OPMLs), such as leukoplakia. Patient outcomes may thus be improved through detection of lesions at a risk for malignant transformation, by identifying and categorizing genetic changes in sequential, progressive OPMLs. We conducted array comparative genomic hybridization analysis of 25 sequential, progressive OPMLs and same-site OSCCs from five patients. Recurrent DNA copy number gains were identified on 1p in 20/25 cases (80) with minimal, high-level amplification regions on 1p35 and 1p36. Other regions of gains were frequently observed: 11q13.4 (68), 9q34.13 (64), 21q22.3 (60), 6p21 and 6q25 (56) and 10q24, 19q13.2, 22q12, 5q31.2, 7p13, 10q24 and 14q22 (48). DNA losses were observed in 20 of samples and mainly detected on 5q31.2 (35), 16p13.2 (30), 9q33.1 and 9q33.29 (25) and 17q11.2, 3p26.2, 18q21.1, 4q34.1 and 8p23.2 (20). Such copy number alterations (CNAs) were mapped in all grades of dysplasia that progressed, and their corresponding OSCCs, in 70 of patients, indicating that these CNAs may be associated with disease progression. Amplified genes mapping within recurrent CNAs (KHDRBS1, PARP1, RAB1A, HBEGF, PAIP2, BTBD7) were selected for validation, by quantitative real-time PCR, in an independent set of 32 progressive leukoplakia, 32 OSSCs and 21 non-progressive leukoplakia samples. Amplification of BTBD7, KHDRBS1, PARP1 and RAB1A was exclusively detected in progressive leukoplakia and corresponding OSCC. BTBD7, KHDRBS1, PARP1 and RAB1A may be associated with OSCC progression. Proteinprotein interaction networks were created to identify possible pathways associated with OSCC progression.

Avaliação do desempenho operacional e de custos entre enfardadoras no recolhimento de palhiço de cana-de-açúcar

Coordenação de Aperfeiçoamento de Pessoal de Nível Superior (CAPES)

Características dos espermatozóides em espécies de Leptodactylus (Anura, Leptodactylidae)

Fundação de Amparo à Pesquisa do Estado de São Paulo (FAPESP)